MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 16435 bp
Accession: NZ_CP117852 Location: 1033268..1049702 Organism: Salmonella enterica subsp. enterica serovar Mbandaka strain SM_F28R Replicon: chromosome
Accession: NZ_CP117852 Location: 1033268..1049702 Organism: Salmonella enterica subsp. enterica serovar Mbandaka strain SM_F28R Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PTZ66_RS04900 (1028851) | 1028851..1029615 | - | 765 | WP_000998688.1 | gluconate 5-dehydrogenase | - |
| PTZ66_RS04905 (1029640) | 1029640..1030671 | - | 1032 | WP_017441182.1 | L-idonate 5-dehydrogenase | - |
| PTZ66_RS04910 (1030888) | 1030888..1031418 | + | 531 | WP_017441181.1 | gluconokinase | - |
| PTZ66_RS04915 (1031446) | 1031446..1032465 | - | 1020 | WP_000152563.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| PTZ66_RS04925 (1033223) | 1033223..1034200 | + | 978 | WP_223195356.1 | IS630 family transposase ISEc33 | Transposase |
| PTZ66_RS04930 (1034220) | 1034220..1034528 | + | 309 | Protein_947 | DUF4942 domain-containing protein | - |
| PTZ66_RS04935 (1034629) | 1034629..1034853 | + | 225 | WP_031233173.1 | ribbon-helix-helix protein, CopG family | - |
| PTZ66_RS04940 (1034962) | 1034962..1035201 | + | 240 | WP_000016244.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| PTZ66_RS04945 (1035204) | 1035204..1035512 | + | 309 | WP_001199743.1 | CcdB family protein | Toxin Detail |
| PTZ66_RS04950 (1035879) | 1035879..1036805 | - | 927 | WP_017441178.1 | HTH-type transcriptional activator HxlR ; Integrase | Integrase |
| PTZ66_RS04955 (1036795) | 1036795..1038414 | - | 1620 | WP_017441177.1 | MobH family relaxase | - |
| PTZ66_RS04960 (1038705) | 1038705..1039160 | - | 456 | WP_031615695.1 | NUDIX domain-containing protein | - |
| PTZ66_RS04965 (1039266) | 1039266..1040177 | - | 912 | WP_017441175.1 | zincin-like metallopeptidase domain-containing protein | - |
| PTZ66_RS04970 (1040263) | 1040263..1040556 | - | 294 | WP_023242879.1 | hypothetical protein | - |
| PTZ66_RS04975 (1040923) | 1040923..1041795 | - | 873 | WP_017441173.1 | HNH endonuclease | - |
| PTZ66_RS04980 (1042041) | 1042041..1043864 | - | 1824 | WP_023242880.1 | response regulator receiver domain | - |
| PTZ66_RS04985 (1043857) | 1043857..1046826 | - | 2970 | WP_017441735.1 | ATP-binding protein | - |
| PTZ66_RS04990 (1046920) | 1046920..1048116 | - | 1197 | WP_017441736.1 | DNA cytosine methyltransferase | - |
| PTZ66_RS04995 (1048591) | 1048591..1049702 | + | 1112 | WP_093976780.1 | IS3 family transposase IS1351 | Transposase |
| PTZ66_RS05000 (1050215) | 1050215..1050931 | - | 717 | WP_000532939.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| PTZ66_RS05005 (1051491) | 1051491..1053122 | - | 1632 | WP_017441740.1 | class I SAM-dependent methyltransferase | - |
| PTZ66_RS05010 (1053127) | 1053127..1053383 | - | 257 | Protein_963 | YjhX family toxin | - |
| PTZ66_RS05015 (1053872) | 1053872..1054480 | + | 609 | WP_000864866.1 | DUF1062 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|