MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 16435 bp
Accession: NZ_CP117851 Location: 1146530..1162964 Organism: Salmonella enterica subsp. enterica serovar Mbandaka strain SM_B30R Replicon: chromosome
Accession: NZ_CP117851 Location: 1146530..1162964 Organism: Salmonella enterica subsp. enterica serovar Mbandaka strain SM_B30R Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PTZ67_RS05700 (1141752) | 1141752..1142360 | - | 609 | WP_000864866.1 | DUF1062 domain-containing protein | - |
| PTZ67_RS05705 (1142849) | 1142849..1143105 | + | 257 | Protein_1112 | YjhX family toxin | - |
| PTZ67_RS05710 (1143110) | 1143110..1144741 | + | 1632 | WP_017441740.1 | class I SAM-dependent methyltransferase | - |
| PTZ67_RS05715 (1145301) | 1145301..1146017 | + | 717 | WP_000532939.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| PTZ67_RS05725 (1148116) | 1148116..1149312 | + | 1197 | WP_017441736.1 | DNA cytosine methyltransferase | - |
| PTZ67_RS05730 (1149406) | 1149406..1152375 | + | 2970 | WP_017441735.1 | ATP-binding protein | - |
| PTZ67_RS05735 (1152368) | 1152368..1154191 | + | 1824 | WP_023242880.1 | response regulator receiver domain | - |
| PTZ67_RS05740 (1154437) | 1154437..1155309 | + | 873 | WP_017441173.1 | HNH endonuclease | - |
| PTZ67_RS05745 (1155676) | 1155676..1155969 | + | 294 | WP_023242879.1 | hypothetical protein | - |
| PTZ67_RS05750 (1156055) | 1156055..1156966 | + | 912 | WP_017441175.1 | zincin-like metallopeptidase domain-containing protein | - |
| PTZ67_RS05755 (1157072) | 1157072..1157527 | + | 456 | WP_031615695.1 | NUDIX domain-containing protein | - |
| PTZ67_RS05760 (1157818) | 1157818..1159437 | + | 1620 | WP_017441177.1 | MobH family relaxase | - |
| PTZ67_RS05765 (1159427) | 1159427..1160353 | + | 927 | WP_017441178.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PTZ67_RS05770 (1160720) | 1160720..1161028 | - | 309 | WP_001199743.1 | CcdB family protein | Toxin Detail |
| PTZ67_RS05775 (1161031) | 1161031..1161270 | - | 240 | WP_000016244.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| PTZ67_RS05780 (1161379) | 1161379..1161603 | - | 225 | WP_031233173.1 | ribbon-helix-helix protein, CopG family | - |
| PTZ67_RS05785 (1161704) | 1161704..1162012 | - | 309 | Protein_1128 | DUF4942 domain-containing protein | - |
| PTZ67_RS05790 (1162032) | 1162032..1163009 | - | 978 | WP_223195356.1 | IS630 family transposase ISEc33 | Transposase |
| PTZ67_RS05800 (1163767) | 1163767..1164786 | + | 1020 | WP_000152563.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| PTZ67_RS05805 (1164814) | 1164814..1165344 | - | 531 | WP_017441181.1 | gluconokinase | - |
| PTZ67_RS05810 (1165561) | 1165561..1166592 | + | 1032 | WP_017441182.1 | L-idonate 5-dehydrogenase | - |
| PTZ67_RS05815 (1166617) | 1166617..1167381 | + | 765 | WP_000998688.1 | gluconate 5-dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|