MGE detailed information
MGE type: Conjugative plasmid MGE length: 41752 bp
Accession: NZ_CP117824 Location: 1..41752 Organism: Xylella fastidiosa strain ICMP 8742 Replicon: plasmid unnamed
Accession: NZ_CP117824 Location: 1..41752 Organism: Xylella fastidiosa strain ICMP 8742 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PUO95_RS11565 (PUO95_11565) | 1128..1442 | - | 315 | WP_152534368.1 | EexN family lipoprotein | - |
| PUO95_RS11570 (PUO95_11570) | 1455..2240 | - | 786 | WP_004091516.1 | P-type conjugative transfer protein TrbJ | - |
| PUO95_RS11575 (PUO95_11575) | 2259..3659 | - | 1401 | WP_004091515.1 | TrbI/VirB10 family protein | - |
| PUO95_RS11580 (PUO95_11580) | 3665..4141 | - | 477 | WP_050812601.1 | conjugal transfer protein TrbH | - |
| PUO95_RS11585 (PUO95_11585) | 4144..5034 | - | 891 | WP_038229217.1 | P-type conjugative transfer protein TrbG | - |
| PUO95_RS11590 (PUO95_11590) | 5051..5767 | - | 717 | WP_004091508.1 | conjugal transfer protein TrbF | - |
| PUO95_RS11595 (PUO95_11595) | 5764..8328 | - | 2565 | WP_072866396.1 | conjugal transfer protein TrbE | - |
| PUO95_RS11600 (PUO95_11600) | 8316..8636 | - | 321 | WP_004091502.1 | conjugal transfer protein TrbD | - |
| PUO95_RS11605 (PUO95_11605) | 8639..9031 | - | 393 | WP_004091500.1 | TrbC/VirB2 family protein | - |
| PUO95_RS11610 (PUO95_11610) | 9044..10003 | - | 960 | WP_038232472.1 | Putative conjugal transfer protein | VF |
| PUO95_RS11615 (PUO95_11615) | 10201..10557 | - | 357 | WP_038232465.1 | transcriptional regulator | - |
| PUO95_RS11620 (PUO95_11620) | 10675..11034 | + | 360 | WP_004091494.1 | single-stranded DNA-binding protein | - |
| PUO95_RS11625 (PUO95_11625) | 11078..11425 | + | 348 | WP_050812600.1 | hypothetical protein | - |
| PUO95_RS11630 (PUO95_11630) | 11469..12380 | + | 912 | WP_004091489.1 | replication protein RepA | - |
| PUO95_RS11635 (PUO95_11635) | 13099..13419 | + | 321 | WP_004091487.1 | KleE stable inheritance protein | - |
| PUO95_RS11640 (PUO95_11640) | 13615..13914 | + | 300 | WP_038232470.1 | transcriptional regulator KorA | - |
| PUO95_RS11645 (PUO95_11645) | 13917..14681 | + | 765 | WP_004091486.1 | ParA family protein | - |
| PUO95_RS11650 (PUO95_11650) | 14690..15709 | + | 1020 | WP_178086808.1 | ParB/RepB/Spo0J family partition protein | - |
| PUO95_RS11655 (PUO95_11655) | 15807..16160 | + | 354 | WP_004091455.1 | hypothetical protein | - |
| PUO95_RS11660 (PUO95_11660) | 16187..16783 | + | 597 | WP_004091453.1 | hypothetical protein | - |
| PUO95_RS11665 (PUO95_11665) | 16887..18101 | - | 1215 | WP_004091452.1 | IS200-IS605 family transposase IS609 | Transposase |
| PUO95_RS11670 (PUO95_11670) | 18124..18537 | + | 414 | WP_081370385.1 | IS200/IS605 family transposase | - |
| PUO95_RS11675 (PUO95_11675) | 18610..19056 | - | 447 | WP_230950297.1 | conjugal transfer protein TraM | - |
| PUO95_RS11680 (PUO95_11680) | 19062..19787 | - | 726 | WP_004091441.1 | AAA family ATPase | - |
| PUO95_RS11685 (PUO95_11685) | 19787..20176 | - | 390 | WP_004091439.1 | TraK family protein | - |
| PUO95_RS11690 (PUO95_11690) | 20390..20743 | + | 354 | WP_004091438.1 | conjugal transfer transcriptional regulator TraJ | - |
| PUO95_RS11695 (PUO95_11695) | 20778..23270 | + | 2493 | WP_004091435.1 | Protein TraI | Relaxase |
| PUO95_RS11700 (PUO95_11700) | 23267..25201 | + | 1935 | WP_004091433.1 | type IV secretory system conjugative DNA transfer family protein | - |
| PUO95_RS11705 (PUO95_11705) | 25198..25734 | + | 537 | WP_004091431.1 | conjugative transfer signal peptidase TraF | - |
| PUO95_RS11710 (PUO95_11710) | 25763..27820 | + | 2058 | WP_128712475.1 | DNA topoisomerase 3 | - |
| PUO95_RS11715 (PUO95_11715) | 27823..28185 | + | 363 | WP_004091427.1 | hypothetical protein | - |
| PUO95_RS11720 (PUO95_11720) | 28191..32306 | + | 4116 | WP_004091425.1 | zincin-like metallopeptidase domain-containing protein | - |
| PUO95_RS11725 (PUO95_11725) | 32430..32855 | + | 426 | WP_004091423.1 | antirestriction protein | - |
| PUO95_RS11730 (PUO95_11730) | 33123..33380 | + | 258 | WP_038229233.1 | hypothetical protein | - |
| PUO95_RS11735 (PUO95_11735) | 33574..34206 | - | 633 | WP_004091419.1 | YkgJ family cysteine cluster protein | - |
| PUO95_RS11740 (PUO95_11740) | 34327..34884 | - | 558 | WP_004091417.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| PUO95_RS11745 (PUO95_11745) | 35074..35448 | - | 375 | WP_010894485.1 | DUF5615 family PIN-like protein | - |
| PUO95_RS11750 (PUO95_11750) | 35445..35675 | - | 231 | WP_004091411.1 | DUF433 domain-containing protein | - |
| PUO95_RS11755 (PUO95_11755) | 35881..36186 | - | 306 | WP_004091409.1 | BrnA antitoxin family protein | Antitoxin Detail |
| PUO95_RS11760 (PUO95_11760) | 36173..36463 | - | 291 | WP_038229226.1 | BrnT family toxin | Toxin Detail |
| PUO95_RS11765 (PUO95_11765) | 36640..36813 | + | 174 | Protein_41 | XRE family transcriptional regulator | - |
| PUO95_RS11770 (PUO95_11770) | 36924..37244 | + | 321 | WP_004091397.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PUO95_RS11775 (PUO95_11775) | 37374..37700 | + | 327 | WP_004091396.1 | DNA-binding protein | - |
| PUO95_RS11780 (PUO95_11780) | 37842..38768 | - | 927 | WP_051606204.1 | hypothetical protein | - |
| PUO95_RS11785 (PUO95_11785) | 39174..39590 | - | 417 | WP_038232460.1 | IS200-IS605 family transposase IS609 | Transposase |
| PUO95_RS11790 (PUO95_11790) | 39613..40770 | + | 1158 | WP_038232468.1 | IS200-IS605 family transposase IS609 | Transposase |
| PUO95_RS11795 (PUO95_11795) | 40866..41471 | - | 606 | WP_038229220.1 | hypothetical protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|