MGE detailed information
MGE type: Prophage MGE length: 66670 bp
Accession: NZ_CP117823 Location: 2006424..2073093 Organism: Xylella fastidiosa strain ICMP 8742 Replicon: chromosome
Accession: NZ_CP117823 Location: 2006424..2073093 Organism: Xylella fastidiosa strain ICMP 8742 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PUO95_RS09125 (PUO95_09125) | 2001752..2002537 | + | 786 | WP_004087362.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| PUO95_RS09130 (PUO95_09130) | 2002574..2005180 | - | 2607 | WP_004087363.1 | DNA mismatch repair protein MutS | - |
| PUO95_RS09135 (PUO95_09135) | 2005613..2006344 | - | 732 | WP_012382616.1 | monofunctional biosynthetic peptidoglycan transglycosylase | - |
| PUO95_RS09140 (PUO95_09140) | 2006424..2007284 | + | 861 | WP_004087365.1 | Hsp33 family molecular chaperone HslO | - |
| PUO95_RS09145 (PUO95_09145) | 2007438..2008307 | + | 870 | WP_014607779.1 | hypothetical protein | - |
| PUO95_RS09155 (PUO95_09155) | 2009080..2009424 | - | 345 | WP_004084923.1 | RidA family protein | - |
| PUO95_RS09160 (PUO95_09160) | 2009627..2009902 | - | 276 | WP_228446138.1 | helix-turn-helix domain-containing protein | - |
| PUO95_RS09165 (PUO95_09165) | 2010151..2011233 | - | 1083 | WP_014607781.1 | phage late control D family protein | - |
| PUO95_RS09170 (PUO95_09170) | 2011224..2011442 | - | 219 | WP_004088371.1 | tail protein X | - |
| PUO95_RS09175 (PUO95_09175) | 2011439..2011921 | - | 483 | WP_011097928.1 | phage tail protein | - |
| PUO95_RS09180 (PUO95_09180) | 2011918..2014173 | - | 2256 | WP_241547255.1 | phage tail tape measure protein | - |
| PUO95_RS09185 (PUO95_09185) | 2014264..2014551 | - | 288 | WP_011097930.1 | phage tail assembly protein | - |
| PUO95_RS09190 (PUO95_09190) | 2014554..2015063 | - | 510 | WP_004086986.1 | phage major tail tube protein | - |
| PUO95_RS09195 (PUO95_09195) | 2015063..2016241 | - | 1179 | WP_128734780.1 | phage tail sheath family protein | - |
| PUO95_RS09200 (PUO95_09200) | 2016306..2017898 | - | 1593 | WP_159241645.1 | hypothetical protein | - |
| PUO95_RS09205 (PUO95_09205) | 2017906..2018463 | - | 558 | WP_004086970.1 | phage tail protein I | - |
| PUO95_RS09210 (PUO95_09210) | 2018456..2019349 | - | 894 | WP_011097611.1 | baseplate J/gp47 family protein | - |
| PUO95_RS09215 (PUO95_09215) | 2019349..2019711 | - | 363 | WP_014607615.1 | GPW/gp25 family protein | - |
| PUO95_RS09220 (PUO95_09220) | 2019837..2020100 | + | 264 | WP_004090907.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| PUO95_RS09225 (PUO95_09225) | 2020087..2020368 | + | 282 | WP_004090909.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| PUO95_RS09230 (PUO95_09230) | 2020405..2020992 | - | 588 | WP_011097612.1 | phage baseplate assembly protein V | - |
| PUO95_RS09235 (PUO95_09235) | 2020989..2021531 | - | 543 | WP_011097613.1 | hypothetical protein | - |
| PUO95_RS09240 (PUO95_09240) | 2021507..2022028 | - | 522 | WP_011097614.1 | hypothetical protein | - |
| PUO95_RS09245 (PUO95_09245) | 2022025..2022348 | - | 324 | WP_011097935.1 | hypothetical protein | - |
| PUO95_RS09250 (PUO95_09250) | 2022348..2022608 | - | 261 | WP_038232801.1 | hypothetical protein | - |
| PUO95_RS09255 (PUO95_09255) | 2022626..2024500 | - | 1875 | WP_038232803.1 | phage major capsid protein | - |
| PUO95_RS09260 (PUO95_09260) | 2024484..2026082 | - | 1599 | WP_167405116.1 | phage portal protein | - |
| PUO95_RS09265 (PUO95_09265) | 2026079..2026630 | - | 552 | WP_004088901.1 | hypothetical protein | - |
| PUO95_RS09270 (PUO95_09270) | 2026634..2028586 | - | 1953 | WP_004088899.1 | phage terminase large subunit family protein | - |
| PUO95_RS09275 (PUO95_09275) | 2028579..2029112 | - | 534 | WP_004088896.1 | terminase small subunit | - |
| PUO95_RS09280 (PUO95_09280) | 2029285..2029509 | - | 225 | WP_160176388.1 | hypothetical protein | - |
| PUO95_RS09285 (PUO95_09285) | 2029511..2029972 | - | 462 | WP_011097939.1 | hypothetical protein | - |
| PUO95_RS09290 (PUO95_09290) | 2029962..2030291 | - | 330 | WP_004086884.1 | phage holin family protein | - |
| PUO95_RS09295 (PUO95_09295) | 2030284..2030778 | - | 495 | WP_011097941.1 | lysozyme | - |
| PUO95_RS09300 (PUO95_09300) | 2030745..2031362 | - | 618 | WP_014607783.1 | hypothetical protein | - |
| PUO95_RS09305 (PUO95_09305) | 2031776..2034304 | - | 2529 | WP_128712484.1 | phage/plasmid primase, P4 family | - |
| PUO95_RS09310 (PUO95_09310) | 2034440..2035033 | - | 594 | WP_128712483.1 | BRO family protein | - |
| PUO95_RS09315 (PUO95_09315) | 2035030..2035419 | - | 390 | WP_128712482.1 | phage antirepressor protein | - |
| PUO95_RS09320 (PUO95_09320) | 2035416..2035799 | - | 384 | WP_061278107.1 | hypothetical protein | - |
| PUO95_RS09325 (PUO95_09325) | 2035796..2036179 | - | 384 | WP_206614042.1 | hypothetical protein | - |
| PUO95_RS09330 (PUO95_09330) | 2036176..2037126 | - | 951 | WP_243857840.1 | hypothetical protein | - |
| PUO95_RS09335 (PUO95_09335) | 2037144..2037359 | - | 216 | WP_241547155.1 | hypothetical protein | - |
| PUO95_RS09340 (PUO95_09340) | 2037389..2037577 | - | 189 | WP_004085135.1 | hypothetical protein | - |
| PUO95_RS09345 (PUO95_09345) | 2037631..2037855 | - | 225 | WP_174856288.1 | hypothetical protein | - |
| PUO95_RS09350 (PUO95_09350) | 2038259..2038519 | - | 261 | WP_012382631.1 | YdaS family helix-turn-helix protein | - |
| PUO95_RS09355 (PUO95_09355) | 2038605..2039363 | + | 759 | WP_011097952.1 | helix-turn-helix transcriptional regulator | - |
| PUO95_RS09360 (PUO95_09360) | 2039524..2040063 | + | 540 | WP_011097953.1 | hypothetical protein | - |
| PUO95_RS09365 (PUO95_09365) | 2040086..2040295 | + | 210 | WP_012382632.1 | hypothetical protein | - |
| PUO95_RS09370 (PUO95_09370) | 2040292..2040732 | + | 441 | WP_011097954.1 | hypothetical protein | - |
| PUO95_RS09375 (PUO95_09375) | 2040964..2041497 | + | 534 | WP_071869852.1 | hypothetical protein | - |
| PUO95_RS09380 (PUO95_09380) | 2041494..2042009 | + | 516 | WP_071869851.1 | hypothetical protein | - |
| PUO95_RS09385 (PUO95_09385) | 2042006..2042467 | + | 462 | WP_072866385.1 | DUF1566 domain-containing protein | - |
| PUO95_RS09390 (PUO95_09390) | 2042527..2043117 | - | 591 | WP_225621683.1 | hypothetical protein | - |
| PUO95_RS09395 (PUO95_09395) | 2043309..2043500 | + | 192 | WP_012382634.1 | hypothetical protein | - |
| PUO95_RS09400 (PUO95_09400) | 2043524..2043715 | + | 192 | WP_038233160.1 | hypothetical protein | - |
| PUO95_RS09405 (PUO95_09405) | 2043747..2043941 | + | 195 | WP_004086187.1 | hypothetical protein | - |
| PUO95_RS09410 (PUO95_09410) | 2043931..2044428 | + | 498 | WP_167405117.1 | hypothetical protein | - |
| PUO95_RS09415 (PUO95_09415) | 2044425..2045702 | + | 1278 | WP_012382637.1 | DUF2800 domain-containing protein | - |
| PUO95_RS09420 (PUO95_09420) | 2045702..2046268 | + | 567 | WP_004090881.1 | DUF2815 family protein | - |
| PUO95_RS09425 (PUO95_09425) | 2046355..2047866 | + | 1512 | WP_011097960.1 | BRO family protein | - |
| PUO95_RS09430 (PUO95_09430) | 2047868..2050048 | + | 2181 | WP_011097961.1 | DNA polymerase | - |
| PUO95_RS09435 (PUO95_09435) | 2050045..2050323 | + | 279 | WP_011097962.1 | VRR-NUC domain-containing protein | - |
| PUO95_RS09440 (PUO95_09440) | 2050325..2050609 | - | 285 | WP_011098229.1 | DUF1640 domain-containing protein | - |
| PUO95_RS09445 (PUO95_09445) | 2050694..2052112 | + | 1419 | WP_011098230.1 | DEAD/DEAH box helicase | - |
| PUO95_RS09450 (PUO95_09450) | 2052109..2052348 | + | 240 | WP_011098231.1 | hypothetical protein | - |
| PUO95_RS09455 (PUO95_09455) | 2052335..2052658 | + | 324 | WP_004089706.1 | helix-turn-helix domain-containing protein | - |
| PUO95_RS09460 (PUO95_09460) | 2052985..2053605 | + | 621 | WP_014607459.1 | hypothetical protein ; Integrase | Integrase |
| PUO95_RS09470 (PUO95_09470) | 2053791..2055800 | - | 2010 | WP_004089700.1 | excinuclease ABC subunit UvrB | - |
| PUO95_RS09475 (PUO95_09475) | 2055955..2056542 | + | 588 | WP_011098232.1 | Tfp pilus assembly protein FimT/FimU | - |
| PUO95_RS09480 (PUO95_09480) | 2057000..2057506 | - | 507 | WP_004089696.1 | hypothetical protein | - |
| PUO95_RS09485 (PUO95_09485) | 2057526..2058434 | - | 909 | WP_004089694.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| PUO95_RS09490 (PUO95_09490) | 2058587..2059162 | + | 576 | WP_011098233.1 | glycine cleavage system protein R | - |
| PUO95_RS09495 (PUO95_09495) | 2059209..2059688 | + | 480 | WP_004089690.1 | peroxiredoxin | - |
| PUO95_RS09500 (PUO95_09500) | 2059753..2061154 | + | 1402 | Protein_1854 | PhoH family protein | - |
| PUO95_RS09505 (PUO95_09505) | 2061522..2061746 | - | 225 | WP_004086512.1 | hypothetical protein | - |
| PUO95_RS09510 (PUO95_09510) | 2061743..2062072 | - | 330 | WP_228446150.1 | hypothetical protein | - |
| PUO95_RS09515 (PUO95_09515) | 2062447..2063421 | - | 975 | WP_004089682.1 | thiamine-phosphate kinase | - |
| PUO95_RS09520 (PUO95_09520) | 2063512..2063985 | - | 474 | WP_004089680.1 | transcription antitermination factor NusB | - |
| PUO95_RS09525 (PUO95_09525) | 2063982..2064446 | - | 465 | WP_004086411.1 | 6,7-dimethyl-8-ribityllumazine synthase | - |
| PUO95_RS09530 (PUO95_09530) | 2064477..2065610 | - | 1134 | WP_004089678.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| PUO95_RS09535 (PUO95_09535) | 2065607..2066209 | - | 603 | WP_004089677.1 | riboflavin synthase | - |
| PUO95_RS09540 (PUO95_09540) | 2066797..2067891 | - | 1095 | WP_004089675.1 | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD | - |
| PUO95_RS09545 (PUO95_09545) | 2068315..2068848 | - | 534 | WP_004089673.1 | transcriptional regulator NrdR | - |
| PUO95_RS09550 (PUO95_09550) | 2069109..2069279 | - | 171 | WP_225621674.1 | hypothetical protein | - |
| PUO95_RS09555 (PUO95_09555) | 2069495..2070748 | - | 1254 | WP_012382734.1 | serine hydroxymethyltransferase | - |
| PUO95_RS09560 (PUO95_09560) | 2071429..2073093 | + | 1665 | WP_011098235.1 | energy-dependent translational throttle protein EttA | - |
| PUO95_RS09565 (PUO95_09565) | 2073646..2075334 | + | 1689 | WP_004089665.1 | malate dehydrogenase (quinone) | - |
| PUO95_RS09570 (PUO95_09570) | 2075499..2075945 | - | 447 | WP_004089664.1 | thiol-disulfide oxidoreductase DCC family protein | - |
| PUO95_RS09575 (PUO95_09575) | 2076472..2077254 | - | 783 | WP_004089660.1 | peptidoglycan editing factor PgeF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|