MGE detailed information
MGE type: Prophage MGE length: 19282 bp
Accession: NZ_CP117821 Location: 345488..364769 Organism: Xylella fastidiosa strain ICMP 8731 Replicon: chromosome
Accession: NZ_CP117821 Location: 345488..364769 Organism: Xylella fastidiosa strain ICMP 8731 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PT013_RS01395 (PT013_01395) | 340855..341577 | + | 723 | WP_004089270.1 | lipoprotein-releasing ABC transporter ATP-binding protein LolD | - |
| PT013_RS01400 (PT013_01400) | 341925..344402 | + | 2478 | WP_038231910.1 | DNA internalization-related competence protein ComEC/Rec2 | - |
| PT013_RS01405 (PT013_01405) | 344387..345049 | + | 663 | WP_004085189.1 | MotA/TolQ/ExbB proton channel family protein | - |
| PT013_RS01410 (PT013_01410) | 345054..345491 | + | 438 | WP_004089267.1 | biopolymer transporter ExbD | - |
| PT013_RS01415 (PT013_01415) | 345509..347257 | + | 1749 | WP_004089264.1 | Lipid A export ATP-binding/permease protein MsbA | VF |
| PT013_RS01420 (PT013_01420) | 347254..348273 | + | 1020 | WP_004089261.1 | Tetraacyldisaccharide 4'-kinase | VF |
| PT013_RS01425 (PT013_01425) | 348680..349369 | - | 690 | WP_012382453.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| PT013_RS01430 (PT013_01430) | 349299..350270 | - | 972 | WP_011097609.1 | hypothetical protein | - |
| PT013_RS01435 (PT013_01435) | 350278..350835 | - | 558 | WP_011097610.1 | phage tail protein I | - |
| PT013_RS01440 (PT013_01440) | 350828..351721 | - | 894 | WP_011097611.1 | baseplate J/gp47 family protein | - |
| PT013_RS01445 (PT013_01445) | 351721..352083 | - | 363 | WP_014607615.1 | GPW/gp25 family protein | - |
| PT013_RS01450 (PT013_01450) | 352257..352538 | + | 282 | WP_004090695.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PT013_RS01455 (PT013_01455) | 352549..352824 | + | 276 | WP_004085172.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| PT013_RS01460 (PT013_01460) | 352912..353214 | + | 303 | WP_004090696.1 | type II toxin-antitoxin system MqsR family toxin | Toxin Detail |
| PT013_RS01465 (PT013_01465) | 353217..353618 | + | 402 | WP_004090697.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin Detail |
| PT013_RS01470 (PT013_01470) | 353687..354274 | - | 588 | WP_011097612.1 | phage baseplate assembly protein V | - |
| PT013_RS01475 (PT013_01475) | 354271..354813 | - | 543 | WP_011097613.1 | hypothetical protein | - |
| PT013_RS01480 (PT013_01480) | 354789..355310 | - | 522 | WP_011097614.1 | hypothetical protein | - |
| PT013_RS01485 (PT013_01485) | 355307..355630 | - | 324 | WP_011097935.1 | hypothetical protein | - |
| PT013_RS01490 (PT013_01490) | 355630..355890 | - | 261 | WP_011097616.1 | hypothetical protein | - |
| PT013_RS01495 (PT013_01495) | 355908..357782 | - | 1875 | WP_011097617.1 | phage major capsid protein | - |
| PT013_RS01500 (PT013_01500) | 357779..358411 | - | 633 | WP_011097618.1 | phage portal protein | - |
| PT013_RS01505 (PT013_01505) | 358462..358926 | + | 465 | WP_261981526.1 | hypothetical protein | - |
| PT013_RS01510 (PT013_01510) | 358923..359201 | + | 279 | WP_011097962.1 | VRR-NUC domain-containing protein | - |
| PT013_RS01515 (PT013_01515) | 359203..359511 | - | 309 | WP_011097621.1 | hypothetical protein | - |
| PT013_RS01520 (PT013_01520) | 359596..361014 | + | 1419 | WP_011097622.1 | DEAD/DEAH box helicase | - |
| PT013_RS01525 (PT013_01525) | 361011..361265 | + | 255 | WP_011097623.1 | DUF4224 domain-containing protein | - |
| PT013_RS01530 (PT013_01530) | 361255..362274 | + | 1020 | WP_011097624.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PT013_RS01535 (PT013_01535) | 363047..363688 | + | 642 | WP_011097625.1 | hypothetical protein | VF |
| PT013_RS01540 (PT013_01540) | 363716..364192 | + | 477 | WP_004089961.1 | histidine phosphatase family protein | - |
| PT013_RS01545 (PT013_01545) | 364197..364769 | + | 573 | WP_011097627.1 | YceI family protein | - |
| PT013_RS01550 (PT013_01550) | 364766..366724 | + | 1959 | WP_011097628.1 | phospholipase D family protein | - |
| PT013_RS01555 (PT013_01555) | 367657..368046 | - | 390 | WP_004089975.1 | helix-turn-helix transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|