MGE detailed information
MGE type: Genomic_island MGE length: 50287 bp
Accession: NZ_CP117821 Location: 2332419..2382705 Organism: Xylella fastidiosa strain ICMP 8731 Replicon: chromosome
Accession: NZ_CP117821 Location: 2332419..2382705 Organism: Xylella fastidiosa strain ICMP 8731 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PT013_RS10330 (PT013_10330) | 2330827..2331681 | + | 855 | WP_004087478.1 | pyrroline-5-carboxylate reductase | - |
| PT013_RS10335 (PT013_10335) | 2332419..2335025 | + | 2607 | WP_004087477.1 | TonB-dependent receptor | - |
| PT013_RS10340 (PT013_10340) | 2335112..2336866 | + | 1755 | WP_004087476.1 | alpha-L-fucosidase | - |
| PT013_RS10350 (PT013_10350) | 2337929..2338156 | + | 228 | WP_004087472.1 | hypothetical protein | - |
| PT013_RS10355 (PT013_10355) | 2338207..2338368 | + | 162 | WP_228446156.1 | hypothetical protein | - |
| PT013_RS10360 (PT013_10360) | 2338368..2338571 | + | 204 | WP_004087466.1 | hypothetical protein | - |
| PT013_RS10365 (PT013_10365) | 2338648..2339061 | - | 414 | WP_004087464.1 | hypothetical protein | - |
| PT013_RS10370 (PT013_10370) | 2339454..2339642 | - | 189 | WP_225621741.1 | hypothetical protein | - |
| PT013_RS10375 (PT013_10375) | 2339812..2342907 | - | 3096 | WP_004087462.1 | type I restriction endonuclease subunit R | - |
| PT013_RS10380 (PT013_10380) | 2342894..2344228 | - | 1335 | WP_011098357.1 | restriction endonuclease subunit S | - |
| PT013_RS10385 (PT013_10385) | 2344228..2346609 | - | 2382 | WP_011098358.1 | class I SAM-dependent DNA methyltransferase | - |
| PT013_RS10390 (PT013_10390) | 2346621..2347325 | - | 705 | WP_012382783.1 | HNH endonuclease family protein | - |
| PT013_RS10395 (PT013_10395) | 2347336..2350359 | - | 3024 | WP_012382784.1 | type I restriction endonuclease subunit R | - |
| PT013_RS10400 (PT013_10400) | 2350356..2351573 | - | 1218 | WP_004087452.1 | restriction endonuclease subunit S | - |
| PT013_RS10405 (PT013_10405) | 2351570..2351836 | - | 267 | WP_012382785.1 | hypothetical protein | - |
| PT013_RS10410 (PT013_10410) | 2351833..2353416 | - | 1584 | WP_011098361.1 | type I restriction-modification system subunit M | - |
| PT013_RS10415 (PT013_10415) | 2353944..2354546 | + | 603 | WP_004087444.1 | LysE family translocator | - |
| PT013_RS10420 (PT013_10420) | 2355195..2355485 | + | 291 | WP_225621591.1 | hypothetical protein | - |
| PT013_RS10425 (PT013_10425) | 2355491..2357023 | + | 1533 | WP_004087440.1 | DUF3375 domain-containing protein | - |
| PT013_RS10430 (PT013_10430) | 2357004..2357717 | + | 714 | WP_004087438.1 | DUF4194 domain-containing protein | - |
| PT013_RS10435 (PT013_10435) | 2357710..2361141 | + | 3432 | WP_004087437.1 | ATP-binding protein | - |
| PT013_RS10440 (PT013_10440) | 2361138..2362343 | + | 1206 | WP_004087436.1 | DUF2220 family protein | - |
| PT013_RS10445 (PT013_10445) | 2362646..2362810 | - | 165 | WP_225621592.1 | hypothetical protein | - |
| PT013_RS10450 (PT013_10450) | 2362863..2363012 | - | 150 | WP_014607527.1 | hypothetical protein | - |
| PT013_RS10455 (PT013_10455) | 2363029..2363922 | - | 894 | WP_004087434.1 | DUF769 domain-containing protein | - |
| PT013_RS10460 (PT013_10460) | 2363927..2364178 | + | 252 | WP_014607528.1 | hypothetical protein | - |
| PT013_RS10465 (PT013_10465) | 2364274..2364570 | + | 297 | WP_164874228.1 | hypothetical protein | - |
| PT013_RS10470 (PT013_10470) | 2364530..2365480 | - | 951 | WP_004087430.1 | COG2958 family protein | - |
| PT013_RS10475 (PT013_10475) | 2365784..2366320 | + | 537 | WP_014607530.1 | hypothetical protein | - |
| PT013_RS10480 (PT013_10480) | 2366317..2366922 | - | 606 | WP_004090246.1 | hypothetical protein | - |
| PT013_RS10485 (PT013_10485) | 2367498..2368379 | + | 882 | WP_004090247.1 | hypothetical protein | - |
| PT013_RS10490 (PT013_10490) | 2368452..2369345 | + | 894 | WP_004090250.1 | hypothetical protein | - |
| PT013_RS10495 (PT013_10495) | 2369452..2369916 | + | 465 | WP_011098369.1 | hypothetical protein | - |
| PT013_RS10500 (PT013_10500) | 2369937..2370446 | + | 510 | WP_004090253.1 | hypothetical protein | - |
| PT013_RS10505 (PT013_10505) | 2370448..2371032 | + | 585 | WP_004090255.1 | DUF5625 family protein | - |
| PT013_RS10510 (PT013_10510) | 2371048..2371263 | + | 216 | WP_011098370.1 | hypothetical protein | - |
| PT013_RS10515 (PT013_10515) | 2371369..2371779 | + | 411 | WP_004090259.1 | hypothetical protein | - |
| PT013_RS10520 (PT013_10520) | 2371776..2372573 | + | 798 | WP_004090261.1 | hypothetical protein | - |
| PT013_RS10525 (PT013_10525) | 2372804..2373682 | + | 879 | WP_004090262.1 | hypothetical protein | - |
| PT013_RS10530 (PT013_10530) | 2373755..2374639 | + | 885 | WP_004090263.1 | hypothetical protein | - |
| PT013_RS10535 (PT013_10535) | 2374642..2377641 | + | 3000 | WP_011098373.1 | hypothetical protein | VF |
| PT013_RS10540 (PT013_10540) | 2378214..2378975 | - | 762 | WP_004090267.1 | Bax inhibitor-1/YccA family protein | - |
| PT013_RS10565 (PT013_10565) | 2380167..2381570 | + | 1404 | WP_274205386.1 | hypothetical protein | - |
| PT013_RS10570 (PT013_10570) | 2381644..2381952 | - | 309 | WP_004085003.1 | putative addiction module antidote protein | Antitoxin Detail |
| PT013_RS10575 (PT013_10575) | 2381956..2382255 | - | 300 | WP_011098375.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PT013_RS10580 (PT013_10580) | 2382310..2382888 | + | 579 | WP_014607536.1 | hypothetical protein | - |
| PT013_RS10585 (PT013_10585) | 2382900..2383043 | + | 144 | WP_155115087.1 | hypothetical protein | - |
| PT013_RS10590 (PT013_10590) | 2383196..2383576 | - | 381 | WP_004089371.1 | DUF596 domain-containing protein | - |
| PT013_RS10595 (PT013_10595) | 2383581..2384711 | - | 1131 | WP_012382788.1 | DUF769 domain-containing protein | - |
| PT013_RS10600 (PT013_10600) | 2385019..2385399 | - | 381 | WP_004087391.1 | DUF596 domain-containing protein | - |
| PT013_RS10605 (PT013_10605) | 2385411..2386772 | - | 1362 | WP_272819646.1 | hemagglutinin | - |
| PT013_RS10610 (PT013_10610) | 2386852..2386995 | + | 144 | WP_155115088.1 | hypothetical protein | - |
| PT013_RS10615 (PT013_10615) | 2387161..2387538 | - | 378 | WP_011098380.1 | DUF596 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|