MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 56207 bp
Accession: NZ_CP117816 Location: 1..56207 Organism: Legionella pneumophila strain D5573 Replicon: plasmid unnamed
Accession: NZ_CP117816 Location: 1..56207 Organism: Legionella pneumophila strain D5573 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PT256_RS00005 (PT256_00005) | 1..423 | + | 423 | WP_041173938.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| PT256_RS00010 (PT256_00010) | 416..2107 | + | 1692 | WP_011212615.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| PT256_RS00015 (PT256_00015) | 2100..2840 | + | 741 | WP_011212616.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| PT256_RS00020 (PT256_00020) | 2840..3346 | + | 507 | WP_042236047.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| PT256_RS00025 (PT256_00025) | 3346..4710 | + | 1365 | WP_011212618.1 | conjugal transfer protein TraH | - |
| PT256_RS00030 (PT256_00030) | 4722..7529 | + | 2808 | WP_011212619.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| PT256_RS00035 (PT256_00035) | 7531..8118 | + | 588 | WP_011212620.1 | hypothetical protein | - |
| PT256_RS00040 (PT256_00040) | 8210..10045 | + | 1836 | WP_011212621.1 | type IV conjugative transfer system coupling protein TraD | - |
| PT256_RS00045 (PT256_00045) | 10060..13008 | + | 2949 | WP_011212622.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| PT256_RS00050 (PT256_00050) | 13025..13348 | + | 324 | WP_011212623.1 | hypothetical protein | - |
| PT256_RS00055 (PT256_00055) | 13531..13974 | - | 444 | WP_059411240.1 | hypothetical protein | - |
| PT256_RS00060 (PT256_00060) | 14023..14238 | - | 216 | WP_059411242.1 | helix-turn-helix transcriptional regulator | - |
| PT256_RS00065 (PT256_00065) | 14248..14697 | - | 450 | WP_080333372.1 | DUF2975 domain-containing protein | - |
| PT256_RS00070 (PT256_00070) | 14925..15497 | - | 573 | WP_059411244.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| PT256_RS00075 (PT256_00075) | 15633..18638 | + | 3006 | WP_059411246.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| PT256_RS00080 (PT256_00080) | 19257..19661 | - | 405 | WP_011212624.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| PT256_RS00085 (PT256_00085) | 19658..19855 | - | 198 | WP_011212625.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| PT256_RS00090 (PT256_00090) | 20727..21590 | - | 864 | WP_052358007.1 | zincin-like metallopeptidase domain-containing protein | - |
| PT256_RS00095 (PT256_00095) | 21900..22061 | - | 162 | WP_011212628.1 | hypothetical protein | - |
| PT256_RS00100 (PT256_00100) | 22634..23167 | - | 534 | WP_011212629.1 | glyoxalase superfamily protein | - |
| PT256_RS00105 (PT256_00105) | 23747..24724 | + | 978 | WP_230305538.1 | hypothetical protein | - |
| PT256_RS00110 (PT256_00110) | 24715..25239 | + | 525 | WP_059411236.1 | hypothetical protein | - |
| PT256_RS00115 (PT256_00115) | 25468..25899 | + | 432 | WP_059411230.1 | hypothetical protein | - |
| PT256_RS00120 (PT256_00120) | 26128..26694 | + | 567 | WP_061724516.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| PT256_RS00125 (PT256_00125) | 27238..27879 | - | 642 | WP_061724517.1 | hypothetical protein | - |
| PT256_RS00130 (PT256_00130) | 27876..28727 | - | 852 | WP_061724518.1 | DNA-processing protein DprA | - |
| PT256_RS00135 (PT256_00135) | 29421..30119 | + | 699 | WP_061724519.1 | hypothetical protein | - |
| PT256_RS00140 (PT256_00140) | 30450..31286 | - | 837 | WP_061724520.1 | DUF2806 domain-containing protein | - |
| PT256_RS00145 (PT256_00145) | 31306..31545 | - | 240 | WP_080447080.1 | Tn3 family transposase TnBth3 | Transposase |
| PT256_RS00150 (PT256_00150) | 31780..33057 | - | 1278 | WP_061638464.1 | Y-family DNA polymerase | - |
| PT256_RS00155 (PT256_00155) | 33044..33550 | - | 507 | WP_011215133.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PT256_RS00160 (PT256_00160) | 33685..34353 | - | 669 | WP_061638463.1 | SOS response-associated peptidase | - |
| PT256_RS00165 (PT256_00165) | 35124..36140 | + | 1017 | WP_106184466.1 | hypothetical protein | VF |
| PT256_RS00170 (PT256_00170) | 36154..37551 | + | 1398 | WP_011212593.1 | hypothetical protein | - |
| PT256_RS00175 (PT256_00175) | 37840..39294 | + | 1455 | WP_011212594.1 | oligopeptide:H+ symporter | - |
| PT256_RS00180 (PT256_00180) | 39296..40318 | - | 1023 | WP_042236057.1 | hypothetical protein | - |
| PT256_RS00185 (PT256_00185) | 40717..41979 | + | 1263 | WP_011212596.1 | hypothetical protein | - |
| PT256_RS00190 (PT256_00190) | 41951..43114 | + | 1164 | WP_011212597.1 | ATP-grasp domain-containing protein | - |
| PT256_RS00195 (PT256_00195) | 43262..43513 | + | 252 | WP_011212598.1 | MoaD/ThiS family protein | - |
| PT256_RS00200 (PT256_00200) | 43518..44540 | + | 1023 | WP_011212599.1 | MoeB/ThiF family adenylyltransferase | - |
| PT256_RS00205 (PT256_00205) | 44537..45598 | + | 1062 | WP_011212600.1 | YcaO-like family protein | - |
| PT256_RS00210 (PT256_00210) | 45591..46625 | + | 1035 | WP_042236054.1 | TfuA-like protein | - |
| PT256_RS00215 (PT256_00215) | 46738..46923 | + | 186 | WP_011212602.1 | hypothetical protein | - |
| PT256_RS00220 (PT256_00220) | 46980..47138 | + | 159 | WP_080282142.1 | carbon storage regulator | - |
| PT256_RS00225 (PT256_00225) | 47272..48018 | + | 747 | WP_011212604.1 | complement resistance protein TraT | - |
| PT256_RS00230 (PT256_00230) | 48138..48425 | + | 288 | WP_011212605.1 | hypothetical protein | - |
| PT256_RS00235 (PT256_00235) | 48447..48734 | + | 288 | WP_227000277.1 | type IV conjugative transfer system protein TraL | - |
| PT256_RS00240 (PT256_00240) | 48744..49313 | + | 570 | WP_042236052.1 | type IV conjugative transfer system protein TraE | - |
| PT256_RS00245 (PT256_00245) | 49306..50022 | + | 717 | WP_011212608.1 | type-F conjugative transfer system secretin TraK | - |
| PT256_RS00250 (PT256_00250) | 50015..51388 | + | 1374 | WP_011212609.1 | TrbI/VirB10 family protein | - |
| PT256_RS00255 (PT256_00255) | 51385..51675 | + | 291 | WP_041173936.1 | TraV family lipoprotein | - |
| PT256_RS00260 (PT256_00260) | 51666..54263 | + | 2598 | WP_042236049.1 | type IV secretion system protein TraC | - |
| PT256_RS00265 (PT256_00265) | 54254..54589 | + | 336 | WP_011212611.1 | type-F conjugative transfer system protein TrbI | - |
| PT256_RS00270 (PT256_00270) | 54586..55221 | + | 636 | WP_011212612.1 | type-F conjugative transfer system protein TraW | - |
| PT256_RS00275 (PT256_00275) | 55211..56194 | + | 984 | WP_011212613.1 | conjugal transfer pilus assembly protein TraU | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|