MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 98022 bp
Accession: NZ_CP117715 Location: 1..98022 Organism: Escherichia coli strain PBS4 Replicon: plasmid pPBS4-p1
Accession: NZ_CP117715 Location: 1..98022 Organism: Escherichia coli strain PBS4 Replicon: plasmid pPBS4-p1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PTA50_RS23595 (PTA50_23595) | 201..1406 | + | 1206 | WP_000817632.1 | Plasmid partition protein A | VF |
| PTA50_RS23600 (PTA50_23600) | 1403..2368 | + | 966 | WP_000725191.1 | ParB family protein | - |
| PTA50_RS23605 (PTA50_23605) | 2635..4341 | + | 1707 | WP_000067710.1 | hypothetical protein | - |
| PTA50_RS23610 (PTA50_23610) | 4402..5991 | + | 1590 | WP_079918237.1 | hypothetical protein | - |
| PTA50_RS23615 (PTA50_23615) | 6001..6816 | + | 816 | WP_000041761.1 | hypothetical protein | - |
| PTA50_RS23620 (PTA50_23620) | 6975..7433 | + | 459 | WP_223689991.1 | hypothetical protein | - |
| PTA50_RS23625 (PTA50_23625) | 7445..7954 | + | 510 | WP_053273039.1 | hypothetical protein | - |
| PTA50_RS23630 (PTA50_23630) | 8071..8226 | - | 156 | WP_001352007.1 | type I toxin-antitoxin system toxin HokD | - |
| PTA50_RS23635 (PTA50_23635) | 8408..8653 | - | 246 | WP_001369095.1 | hypothetical protein | - |
| PTA50_RS23640 (PTA50_23640) | 8704..9549 | - | 846 | WP_001379176.1 | helix-turn-helix domain-containing protein | - |
| PTA50_RS23645 (PTA50_23645) | 9579..10379 | - | 801 | WP_001187871.1 | phage antirepressor KilAC domain-containing protein | - |
| PTA50_RS23650 (PTA50_23650) | 10544..11587 | - | 1044 | WP_000743162.1 | phage antirepressor Ant | - |
| PTA50_RS23655 (PTA50_23655) | 11584..11805 | - | 222 | WP_000245708.1 | host cell division inhibitor Icd-like protein | - |
| PTA50_RS23660 (PTA50_23660) | 12425..12937 | + | 513 | WP_000039791.1 | hypothetical protein | - |
| PTA50_RS23665 (PTA50_23665) | 12941..13480 | + | 540 | WP_001033469.1 | DUF5384 family protein | - |
| PTA50_RS23670 (PTA50_23670) | 13561..14127 | + | 567 | WP_033561727.1 | hypothetical protein | - |
| PTA50_RS23675 (PTA50_23675) | 14138..14749 | + | 612 | WP_000523980.1 | hypothetical protein | - |
| PTA50_RS23680 (PTA50_23680) | 14764..15645 | + | 882 | WP_000926346.1 | hypothetical protein | - |
| PTA50_RS23685 (PTA50_23685) | 15727..19149 | + | 3423 | WP_111975837.1 | transglycosylase SLT domain-containing protein | - |
| PTA50_RS23690 (PTA50_23690) | 19149..19505 | + | 357 | WP_000002800.1 | hypothetical protein | - |
| PTA50_RS23695 (PTA50_23695) | 19502..20935 | + | 1434 | WP_000047920.1 | bleomycin hydrolase | - |
| PTA50_RS23700 (PTA50_23700) | 20935..21771 | + | 837 | WP_001189838.1 | hypothetical protein | - |
| PTA50_RS23705 (PTA50_23705) | 21850..22284 | + | 435 | WP_001286328.1 | hypothetical protein | - |
| PTA50_RS23710 (PTA50_23710) | 22788..23000 | + | 213 | Protein_23 | tail fiber protein | - |
| PTA50_RS23715 (PTA50_23715) | 24042..24239 | + | 198 | Protein_24 | phage tail protein | - |
| PTA50_RS23720 (PTA50_23720) | 25764..26309 | + | 546 | WP_023356302.1 | tail assembly chaperone | - |
| PTA50_RS23725 (PTA50_23725) | 26344..26856 | - | 513 | WP_023356301.1 | tail fiber assembly protein | - |
| PTA50_RS23730 (PTA50_23730) | 26868..29348 | - | 2481 | WP_106121214.1 | phage tail protein | - |
| PTA50_RS23735 (PTA50_23735) | 29396..29956 | - | 561 | WP_000905118.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| PTA50_RS23740 (PTA50_23740) | 30084..30365 | + | 282 | WP_000332809.1 | phage holin family protein | - |
| PTA50_RS23745 (PTA50_23745) | 30433..30762 | + | 330 | WP_000887652.1 | phage holin family protein | - |
| PTA50_RS23750 (PTA50_23750) | 30759..31202 | + | 444 | WP_000580776.1 | hypothetical protein | - |
| PTA50_RS23755 (PTA50_23755) | 31189..31791 | + | 603 | WP_000164724.1 | hypothetical protein | - |
| PTA50_RS23760 (PTA50_23760) | 31793..33712 | + | 1920 | WP_042102857.1 | phage protein DarA | - |
| PTA50_RS23765 (PTA50_23765) | 33709..34074 | + | 366 | WP_000175480.1 | hypothetical protein | - |
| PTA50_RS23770 (PTA50_23770) | 34087..37074 | + | 2988 | WP_023356275.1 | hypothetical protein | - |
| PTA50_RS23775 (PTA50_23775) | 37064..37372 | + | 309 | WP_023356276.1 | hypothetical protein | - |
| PTA50_RS23780 (PTA50_23780) | 37404..38498 | - | 1095 | WP_000610386.1 | hypothetical protein | - |
| PTA50_RS23785 (PTA50_23785) | 38491..39285 | - | 795 | WP_023356277.1 | hypothetical protein | - |
| PTA50_RS23790 (PTA50_23790) | 39483..39971 | - | 489 | WP_000068865.1 | single-stranded DNA-binding protein | - |
| PTA50_RS23795 (PTA50_23795) | 40141..40698 | + | 558 | WP_001345478.1 | lysozyme | - |
| PTA50_RS23800 (PTA50_23800) | 40990..42009 | - | 1020 | WP_000132938.1 | head processing protein | - |
| PTA50_RS23805 (PTA50_23805) | 42002..43711 | - | 1710 | WP_024200402.1 | hypothetical protein | - |
| PTA50_RS23810 (PTA50_23810) | 43787..50554 | + | 6768 | WP_273792013.1 | N-6 DNA methylase | - |
| PTA50_RS23815 (PTA50_23815) | 50588..51028 | + | 441 | WP_000224043.1 | hypothetical protein | - |
| PTA50_RS23820 (PTA50_23820) | 51025..51273 | + | 249 | WP_000747846.1 | hypothetical protein | - |
| PTA50_RS23825 (PTA50_23825) | 51419..53365 | + | 1947 | WP_032190829.1 | site-specific DNA-methyltransferase | - |
| PTA50_RS23830 (PTA50_23830) | 53368..56280 | + | 2913 | WP_015974229.1 | type III restriction-modification system endonuclease | - |
| PTA50_RS23835 (PTA50_23835) | 56356..56997 | - | 642 | WP_024175651.1 | hypothetical protein | - |
| PTA50_RS23840 (PTA50_23840) | 57187..57747 | - | 561 | WP_015974227.1 | Ref family protein | - |
| PTA50_RS23845 (PTA50_23845) | 57995..58306 | - | 312 | WP_001224246.1 | hypothetical protein | - |
| PTA50_RS23850 (PTA50_23850) | 58357..59388 | - | 1032 | WP_000067530.1 | site-specific integrase | - |
| PTA50_RS23855 (PTA50_23855) | 59396..59617 | - | 222 | WP_113387964.1 | creatininase | - |
| PTA50_RS23860 (PTA50_23860) | 60222..60431 | + | 210 | WP_000874154.1 | hypothetical protein | - |
| PTA50_RS23865 (PTA50_23865) | 60542..61393 | + | 852 | WP_219350791.1 | phage repressor protein C1 | - |
| PTA50_RS23870 (PTA50_23870) | 61418..62902 | - | 1485 | WP_000124150.1 | terminase | - |
| PTA50_RS23875 (PTA50_23875) | 62902..64095 | - | 1194 | WP_000219608.1 | hypothetical protein | - |
| PTA50_RS23880 (PTA50_23880) | 64182..64634 | - | 453 | WP_001312282.1 | late promoter-activating protein (Gp10) | - |
| PTA50_RS23885 (PTA50_23885) | 64723..65766 | - | 1044 | WP_000644102.1 | DUF968 domain-containing protein | - |
| PTA50_RS23890 (PTA50_23890) | 65794..65973 | - | 180 | WP_000113019.1 | hypothetical protein | - |
| PTA50_RS23895 (PTA50_23895) | 65978..66358 | - | 381 | WP_001216047.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| PTA50_RS23900 (PTA50_23900) | 66358..66579 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PTA50_RS23905 (PTA50_23905) | 66652..67041 | - | 390 | WP_000506730.1 | S24 family peptidase | - |
| PTA50_RS23910 (PTA50_23910) | 67216..67800 | + | 585 | WP_042198310.1 | hypothetical protein | - |
| PTA50_RS23915 (PTA50_23915) | 67801..68157 | + | 357 | WP_001062545.1 | hypothetical protein | - |
| PTA50_RS23920 (PTA50_23920) | 69233..69595 | - | 363 | WP_001261543.1 | hypothetical protein | - |
| PTA50_RS23925 (PTA50_23925) | 69592..70491 | - | 900 | WP_233403841.1 | hypothetical protein | - |
| PTA50_RS23930 (PTA50_23930) | 70468..70602 | - | 135 | Protein_67 | hypothetical protein | - |
| PTA50_RS23935 (PTA50_23935) | 70936..71114 | - | 179 | Protein_68 | hypothetical protein | - |
| PTA50_RS23940 (PTA50_23940) | 71116..71304 | - | 189 | WP_000797279.1 | hypothetical protein | - |
| PTA50_RS23945 (PTA50_23945) | 71650..72339 | - | 690 | WP_042198318.1 | ead/Ea22-like family protein | - |
| PTA50_RS23950 (PTA50_23950) | 72341..72640 | - | 300 | WP_000215167.1 | hypothetical protein | - |
| PTA50_RS23955 (PTA50_23955) | 72637..73350 | - | 714 | WP_053273041.1 | hypothetical protein | - |
| PTA50_RS23960 (PTA50_23960) | 73347..73637 | - | 291 | WP_001018057.1 | DUF4752 family protein | - |
| PTA50_RS23965 (PTA50_23965) | 73634..74338 | - | 705 | WP_042198324.1 | ead/Ea22-like family protein | - |
| PTA50_RS23970 (PTA50_23970) | 74325..74912 | - | 588 | WP_042198327.1 | hypothetical protein | - |
| PTA50_RS23975 (PTA50_23975) | 75103..75609 | - | 507 | WP_000021754.1 | hypothetical protein | - |
| PTA50_RS23980 (PTA50_23980) | 75682..76944 | - | 1263 | WP_042198330.1 | hypothetical protein | - |
| PTA50_RS23985 (PTA50_23985) | 77246..77947 | - | 702 | WP_000684845.1 | hypothetical protein | - |
| PTA50_RS23990 (PTA50_23990) | 77944..78621 | - | 678 | WP_001354545.1 | metallophosphoesterase | - |
| PTA50_RS23995 (PTA50_23995) | 78618..79244 | - | 627 | WP_000484110.1 | hypothetical protein | - |
| PTA50_RS24000 (PTA50_24000) | 79746..79901 | - | 156 | WP_000096174.1 | hypothetical protein | - |
| PTA50_RS24005 (PTA50_24005) | 79968..80546 | - | 579 | WP_000943607.1 | VRR-NUC domain-containing protein | - |
| PTA50_RS24010 (PTA50_24010) | 80549..80794 | - | 246 | WP_000840931.1 | hypothetical protein | - |
| PTA50_RS24015 (PTA50_24015) | 81058..81318 | + | 261 | WP_001361632.1 | hypothetical protein | - |
| PTA50_RS24020 (PTA50_24020) | 81328..82545 | + | 1218 | WP_001141908.1 | hypothetical protein | - |
| PTA50_RS24025 (PTA50_24025) | 82549..83277 | + | 729 | WP_000896810.1 | hypothetical protein | - |
| PTA50_RS24030 (PTA50_24030) | 83264..84049 | + | 786 | WP_000602711.1 | hypothetical protein | - |
| PTA50_RS24035 (PTA50_24035) | 84051..85067 | + | 1017 | WP_000212018.1 | hypothetical protein | - |
| PTA50_RS24040 (PTA50_24040) | 85060..85692 | + | 633 | WP_000535202.1 | baseplate protein | - |
| PTA50_RS24045 (PTA50_24045) | 85739..86737 | - | 999 | WP_113440157.1 | hypothetical protein | - |
| PTA50_RS24050 (PTA50_24050) | 86737..88101 | - | 1365 | WP_001276603.1 | replicative DNA helicase | - |
| PTA50_RS24060 (PTA50_24060) | 88574..88738 | - | 165 | WP_000234831.1 | DUF3927 family protein | - |
| PTA50_RS24065 (PTA50_24065) | 88738..89163 | - | 426 | WP_000900640.1 | tellurite/colicin resistance protein | - |
| PTA50_RS24080 (PTA50_24080) | 90918..93182 | - | 2265 | WP_000660987.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| PTA50_RS24085 (PTA50_24085) | 93179..94084 | - | 906 | WP_000472529.1 | recombination-associated protein RdgC | - |
| PTA50_RS24090 (PTA50_24090) | 94077..94361 | - | 285 | WP_001177860.1 | hypothetical protein | - |
| PTA50_RS24095 (PTA50_24095) | 94824..95612 | + | 789 | WP_001774492.1 | hypothetical protein | - |
| PTA50_RS24100 (PTA50_24100) | 95652..96074 | + | 423 | WP_000007767.1 | hypothetical protein | - |
| PTA50_RS24105 (PTA50_24105) | 96252..96644 | + | 393 | WP_001281114.1 | hypothetical protein | - |
| PTA50_RS24110 (PTA50_24110) | 96963..97823 | + | 861 | WP_001076427.1 | replication protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|