MGE detailed information
MGE type: Genomic_island MGE length: 26122 bp
Accession: NZ_CP117714 Location: 783912..810033 Organism: Escherichia coli strain PBS4 Replicon: chromosome
Accession: NZ_CP117714 Location: 783912..810033 Organism: Escherichia coli strain PBS4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PTA50_RS03780 (779061) | 779061..779624 | + | 564 | WP_001115140.1 | type II secretion system minor pseudopilin GspH | - |
| PTA50_RS03785 (779621) | 779621..779992 | + | 372 | WP_000820125.1 | type II secretion system minor pseudopilin GspI | - |
| PTA50_RS03790 (779989) | 779989..780588 | + | 600 | WP_001255040.1 | type II secretion system minor pseudopilin GspJ | - |
| PTA50_RS03795 (780591) | 780591..781568 | + | 978 | WP_000633238.1 | type II secretion system minor pseudopilin GspK | - |
| PTA50_RS03800 (781565) | 781565..782743 | + | 1179 | WP_000094971.1 | type II secretion system protein GspL | - |
| PTA50_RS03805 (782745) | 782745..783281 | + | 537 | WP_000942795.1 | GspM family type II secretion system protein YghD | - |
| PTA50_RS03810 (783562) | 783562..783900 | - | 339 | WP_227456471.1 | DUF5983 family protein | - |
| PTA50_RS03815 (783912) | 783912..784286 | - | 375 | WP_072665353.1 | TA system toxin CbtA family protein | Toxin Detail |
| PTA50_RS03820 (784333) | 784333..784710 | - | 378 | WP_041124172.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| PTA50_RS03825 (784786) | 784786..785007 | - | 222 | WP_000692307.1 | DUF987 domain-containing protein | - |
| PTA50_RS03830 (785076) | 785076..785552 | - | 477 | WP_021559500.1 | RadC family protein | - |
| PTA50_RS03835 (785568) | 785568..786053 | - | 486 | WP_041124170.1 | antirestriction protein | - |
| PTA50_RS03840 (786145) | 786145..786963 | - | 819 | WP_001234621.1 | DUF932 domain-containing protein | - |
| PTA50_RS03845 (787062) | 787062..787295 | - | 234 | WP_001278287.1 | DUF905 family protein | - |
| PTA50_RS03850 (787301) | 787301..787978 | - | 678 | WP_021559490.1 | hypothetical protein | - |
| PTA50_RS03855 (788129) | 788129..788809 | - | 681 | WP_001282912.1 | WYL domain-containing protein | - |
| PTA50_RS03860 (789012) | 789012..789896 | - | 885 | WP_021559489.1 | 50S ribosome-binding GTPase | - |
| PTA50_RS03865 (790081) | 790081..791211 | + | 1131 | WP_021559488.1 | hypothetical protein | - |
| PTA50_RS03870 (792710) | 792710..793441 | + | 732 | WP_021559487.1 | inovirus Gp2 family protein | - |
| PTA50_RS03875 (793962) | 793962..794444 | - | 483 | WP_001605868.1 | hypothetical protein | - |
| PTA50_RS03880 (795329) | 795329..796846 | + | 1518 | WP_032147601.1 | hypothetical protein | - |
| PTA50_RS03885 (796988) | 796988..798146 | - | 1159 | Protein_762 | IS30 family transposase | - |
| PTA50_RS03890 (798462) | 798462..801095 | + | 2634 | WP_021536679.1 | restriction endonuclease | - |
| PTA50_RS03895 (801452) | 801452..802423 | - | 972 | WP_021536680.1 | IS481 family transposase ISEc18 | Transposase |
| PTA50_RS03900 (803519) | 803519..804085 | + | 567 | WP_021559486.1 | inovirus-type Gp2 protein | - |
| PTA50_RS03905 (804205) | 804205..804354 | - | 150 | WP_162014428.1 | hypothetical protein | - |
| PTA50_RS03910 (804369) | 804369..804944 | + | 576 | WP_021559485.1 | hypothetical protein | - |
| PTA50_RS03915 (805013) | 805013..805249 | + | 237 | WP_000958149.1 | AlpA family transcriptional regulator | - |
| PTA50_RS03920 (805492) | 805492..806040 | + | 549 | WP_001566979.1 | hypothetical protein | - |
| PTA50_RS03925 (806059) | 806059..806403 | - | 345 | WP_001566978.1 | ProQ/FinO family protein | - |
| PTA50_RS03930 (806400) | 806400..806573 | - | 174 | WP_001566977.1 | hypothetical protein | - |
| PTA50_RS03935 (806709) | 806709..806915 | + | 207 | WP_157839027.1 | hypothetical protein | - |
| PTA50_RS03940 (807281) | 807281..807715 | + | 435 | WP_021559484.1 | H-NS family nucleoid-associated regulatory protein | - |
| PTA50_RS03945 (808131) | 808131..808700 | - | 570 | WP_021559483.1 | hypothetical protein | - |
| PTA50_RS03950 (808801) | 808801..810033 | - | 1233 | WP_021559482.1 | dNTP triphosphohydrolase | - |
| PTA50_RS03955 (810437) | 810437..812149 | + | 1713 | WP_064055550.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| PTA50_RS03960 (812147) | 812147..812479 | - | 333 | Protein_777 | IS66 family insertion sequence element accessory protein TnpB | - |
| PTA50_RS03965 (812771) | 812771..814135 | - | 1365 | WP_033546150.1 | phosphoglycerate transporter PgtP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|