MGE detailed information
MGE type: Genomic_island MGE length: 15227 bp
Accession: NZ_CP117714 Location: 4185272..4200498 Organism: Escherichia coli strain PBS4 Replicon: chromosome
Accession: NZ_CP117714 Location: 4185272..4200498 Organism: Escherichia coli strain PBS4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PTA50_RS20270 (4181804) | 4181804..4182529 | - | 726 | WP_000066557.1 | type 1 fimbria chaperone FimC | - |
| PTA50_RS20275 (4182566) | 4182566..4183105 | - | 540 | WP_000824114.1 | fimbrial protein | - |
| PTA50_RS20280 (4183170) | 4183170..4183718 | - | 549 | WP_000695543.1 | type 1 fimbrial major subunit FimA | - |
| PTA50_RS20285 (4184198) | 4184198..4184794 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| PTA50_RS20290 (4185272) | 4185272..4185874 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| PTA50_RS20295 (4187330) | 4187330..4188046 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| PTA50_RS20300 (4188065) | 4188065..4189171 | + | 1107 | WP_001044128.1 | N-acetylneuraminate epimerase | - |
| PTA50_RS20305 (4189236) | 4189236..4190216 | + | 981 | WP_001366032.1 | sialate O-acetylesterase | - |
| PTA50_RS20310 (4190224) | 4190224..4190328 | - | 105 | Protein_3975 | HNH endonuclease | - |
| PTA50_RS20315 (4190428) | 4190428..4191300 | + | 873 | WP_000168567.1 | HNH endonuclease | - |
| PTA50_RS20320 (4191411) | 4191411..4192409 | - | 999 | WP_001240355.1 | membrane protein | - |
| PTA50_RS20325 (4192983) | 4192983..4193354 | - | 372 | WP_001193488.1 | TA system toxin CbtA family protein | Toxin Detail |
| PTA50_RS20330 (4193393) | 4193393..4193758 | - | 366 | WP_001059301.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| PTA50_RS20335 (4193784) | 4193784..4194005 | - | 222 | WP_000691983.1 | DUF987 domain-containing protein | - |
| PTA50_RS20340 (4194002) | 4194002..4194544 | - | 543 | WP_015740440.1 | DNA repair protein RadC | - |
| PTA50_RS20345 (4194557) | 4194557..4195000 | - | 444 | WP_001096016.1 | antirestriction protein | - |
| PTA50_RS20350 (4195031) | 4195031..4195852 | - | 822 | WP_001234409.1 | DUF932 domain-containing protein | - |
| PTA50_RS20355 (4195972) | 4195972..4196445 | - | 474 | WP_001298943.1 | hypothetical protein | - |
| PTA50_RS20360 (4196517) | 4196517..4196969 | - | 453 | WP_000734321.1 | hypothetical protein | - |
| PTA50_RS20365 (4197005) | 4197005..4197721 | - | 717 | WP_000174910.1 | WYL domain-containing protein | - |
| PTA50_RS20370 (4197965) | 4197965..4198840 | - | 876 | WP_001039469.1 | GTPase family protein | - |
| PTA50_RS20375 (4199068) | 4199068..4199808 | - | 741 | WP_224142765.1 | hypothetical protein | - |
| PTA50_RS20380 (4200292) | 4200292..4200498 | + | 207 | WP_000213332.1 | AlpA family phage regulatory protein | - |
| PTA50_RS20385 (4200595) | 4200595..4201188 | + | 594 | WP_000656300.1 | hypothetical protein | - |
| PTA50_RS20390 (4201387) | 4201387..4201962 | + | 576 | WP_001180706.1 | inovirus-type Gp2 protein | - |
| PTA50_RS20395 (4202133) | 4202133..4202425 | + | 293 | Protein_3992 | DNA polymerase III subunit alpha | - |
| PTA50_RS20400 (4202725) | 4202725..4203087 | + | 363 | WP_000859002.1 | 6-carboxytetrahydropterin synthase QueD | - |
| PTA50_RS20405 (4203144) | 4203144..4205399 | - | 2256 | WP_001083255.1 | protein DpdD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|