MGE detailed information
MGE type: Genomic_island MGE length: 9818 bp
Accession: NZ_CP117698 Location: 852828..862645 Organism: Salmonella enterica subsp. enterica serovar London strain L1 Replicon: chromosome
Accession: NZ_CP117698 Location: 852828..862645 Organism: Salmonella enterica subsp. enterica serovar London strain L1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PRJ38_RS04090 (847893) | 847893..848991 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| PRJ38_RS04095 (849001) | 849001..850518 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| PRJ38_RS04100 (850594) | 850594..851139 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| PRJ38_RS04105 (851404) | 851404..852162 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| PRJ38_RS04115 (852408) | 852408..852605 | - | 198 | WP_023255488.1 | hypothetical protein | - |
| PRJ38_RS04120 (852828) | 852828..853055 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| PRJ38_RS04125 (853055) | 853055..853453 | + | 399 | WP_000911337.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| PRJ38_RS04130 (854259) | 854259..854795 | + | 537 | WP_001038500.1 | hypothetical protein | VF |
| PRJ38_RS04135 (854842) | 854842..855474 | + | 633 | WP_000835264.1 | YfdX family protein | - |
| PRJ38_RS04140 (856193) | 856193..856777 | + | 585 | WP_001244638.1 | hypothetical protein | VF |
| PRJ38_RS04145 (856897) | 856897..859386 | + | 2490 | WP_023256407.1 | hypothetical protein | VF |
| PRJ38_RS04150 (859427) | 859427..860170 | + | 744 | WP_023256406.1 | hypothetical protein | VF |
| PRJ38_RS04155 (860167) | 860167..861243 | + | 1077 | WP_058805773.1 | fimbrial protein | - |
| PRJ38_RS04160 (861388) | 861388..861900 | + | 513 | WP_001660939.1 | CaiF/GrlA family transcriptional regulator | - |
| PRJ38_RS04165 (861887) | 861887..862645 | + | 759 | WP_000134802.1 | transcriptional regulator | - |
| PRJ38_RS04170 (862855) | 862855..863679 | - | 825 | WP_058805774.1 | nickel/cobalt efflux protein RcnA | - |
| PRJ38_RS04175 (863802) | 863802..864074 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| PRJ38_RS04180 (864105) | 864105..865334 | - | 1230 | WP_000036840.1 | amino acid permease | - |
| PRJ38_RS04185 (865476) | 865476..865931 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| PRJ38_RS04190 (866035) | 866035..866898 | + | 864 | WP_001270769.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|