MGE detailed information
MGE type: Genomic_island MGE length: 9818 bp
Accession: NZ_CP117696 Location: 853894..863711 Organism: Salmonella enterica subsp. enterica serovar London strain F1 Replicon: chromosome
Accession: NZ_CP117696 Location: 853894..863711 Organism: Salmonella enterica subsp. enterica serovar London strain F1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PTQ22_RS04100 (848959) | 848959..850057 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| PTQ22_RS04105 (850067) | 850067..851584 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| PTQ22_RS04110 (851660) | 851660..852205 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| PTQ22_RS04115 (852470) | 852470..853228 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| PTQ22_RS04125 (853474) | 853474..853671 | - | 198 | WP_023255488.1 | hypothetical protein | - |
| PTQ22_RS04130 (853894) | 853894..854121 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| PTQ22_RS04135 (854121) | 854121..854519 | + | 399 | WP_000911337.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| PTQ22_RS04140 (855325) | 855325..855861 | + | 537 | WP_001038500.1 | hypothetical protein | VF |
| PTQ22_RS04145 (855908) | 855908..856540 | + | 633 | WP_000835264.1 | YfdX family protein | - |
| PTQ22_RS04150 (857259) | 857259..857843 | + | 585 | WP_001244638.1 | Guanylate kinase | VF |
| PTQ22_RS04155 (857963) | 857963..860452 | + | 2490 | WP_023256407.1 | DNA-directed RNA polymerase subunit omega | VF |
| PTQ22_RS04160 (860493) | 860493..861236 | + | 744 | WP_023256406.1 | hypothetical protein | VF |
| PTQ22_RS04165 (861233) | 861233..862309 | + | 1077 | WP_058805773.1 | fimbrial protein | - |
| PTQ22_RS04170 (862454) | 862454..862966 | + | 513 | WP_001660939.1 | CaiF/GrlA family transcriptional regulator | - |
| PTQ22_RS04175 (862953) | 862953..863711 | + | 759 | WP_000134802.1 | transcriptional regulator | - |
| PTQ22_RS04180 (863921) | 863921..864745 | - | 825 | WP_058805774.1 | nickel/cobalt efflux protein RcnA | - |
| PTQ22_RS04185 (864868) | 864868..865140 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| PTQ22_RS04190 (865171) | 865171..866400 | - | 1230 | WP_000036840.1 | amino acid permease | - |
| PTQ22_RS04195 (866542) | 866542..866997 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| PTQ22_RS04200 (867101) | 867101..867964 | + | 864 | WP_001270769.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|