MGE detailed information
MGE type: Genomic_island MGE length: 37890 bp
Accession: NZ_CP117696 Location: 3563670..3601559 Organism: Salmonella enterica subsp. enterica serovar London strain F1 Replicon: chromosome
Accession: NZ_CP117696 Location: 3563670..3601559 Organism: Salmonella enterica subsp. enterica serovar London strain F1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PTQ22_RS17315 () | 3558737..3559504 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| PTQ22_RS17320 () | 3559875..3560282 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| PTQ22_RS17325 () | 3560613..3561332 | + | 720 | WP_000787603.1 | adhesin/invasin protein PagN | - |
| PTQ22_RS17330 () | 3561336..3561551 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| PTQ22_RS17335 () | 3561671..3562618 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| PTQ22_RS17340 () | 3563112..3563352 | - | 241 | Protein_3398 | PerC family transcriptional regulator | - |
| PTQ22_RS17345 () | 3563435..3564245 | - | 811 | Protein_3399 | hypothetical protein | VF |
| PTQ22_RS17350 () | 3564651..3565121 | - | 471 | WP_023255137.1 | AfaD family invasin | - |
| PTQ22_RS17355 () | 3565143..3567653 | - | 2511 | WP_023255136.1 | hypothetical protein | VF |
| PTQ22_RS17360 () | 3567677..3568414 | - | 738 | WP_058805822.1 | hypothetical protein | VF |
| PTQ22_RS17365 () | 3568498..3568992 | - | 495 | WP_187788956.1 | pilus assembly protein | - |
| PTQ22_RS17370 () | 3569757..3570458 | - | 702 | Protein_3404 | integrase core domain-containing protein | - |
| PTQ22_RS17375 () | 3570511..3570825 | + | 315 | WP_011233128.1 | SymE family type I addiction module toxin | - |
| PTQ22_RS17380 () | 3570892..3571170 | - | 279 | WP_077905025.1 | hypothetical protein | - |
| PTQ22_RS17385 () | 3571486..3571953 | - | 468 | WP_000828173.1 | sugar tyrosine-protein kinase | - |
| PTQ22_RS17390 () | 3572825..3573058 | - | 234 | WP_129374720.1 | hypothetical protein | - |
| - | 3573235..3573616 | - | 382 | - | - | Antitoxin Detail |
| PTQ22_RS17395 () | 3573392..3573667 | + | 276 | WP_058805824.1 | SymE family type I addiction module toxin | Toxin Detail |
| PTQ22_RS17400 () | 3573712..3574029 | - | 318 | WP_129374721.1 | hypothetical protein | - |
| PTQ22_RS17405 () | 3573995..3575278 | - | 1284 | Protein_3411 | hypothetical protein | VF |
| PTQ22_RS17410 () | 3575415..3575879 | - | 465 | WP_223152163.1 | hypothetical protein | - |
| PTQ22_RS17415 () | 3575857..3578688 | - | 2832 | WP_058805826.1 | RHS repeat-associated core domain-containing protein | - |
| PTQ22_RS17420 () | 3578739..3579017 | + | 279 | Protein_3414 | SymE family type I addiction module toxin | - |
| PTQ22_RS17425 () | 3579176..3580042 | - | 867 | WP_049868168.1 | leucine-rich repeat domain-containing protein | - |
| PTQ22_RS17430 () | 3580033..3584133 | - | 4101 | WP_223195405.1 | RHS repeat-associated core domain-containing protein | - |
| PTQ22_RS17435 () | 3584152..3584599 | - | 448 | Protein_3417 | DcrB-related protein | - |
| PTQ22_RS17440 () | 3584623..3586812 | - | 2190 | WP_058805827.1 | hypothetical protein | VF |
| PTQ22_RS17445 () | 3587209..3587730 | - | 522 | WP_077946913.1 | DUF2778 domain-containing protein | - |
| PTQ22_RS17450 () | 3587754..3588170 | - | 417 | WP_001596567.1 | DUF2195 family protein | - |
| PTQ22_RS17455 () | 3588167..3588262 | - | 96 | Protein_3421 | hypothetical protein | - |
| PTQ22_RS17460 () | 3588298..3588759 | - | 462 | WP_001674711.1 | hypothetical protein | - |
| PTQ22_RS17465 () | 3588744..3589214 | - | 471 | WP_000528843.1 | glucosaminidase domain-containing protein | - |
| PTQ22_RS17470 () | 3589257..3590024 | - | 768 | WP_001254127.1 | TagF domain-containing protein | - |
| PTQ22_RS17475 () | 3590024..3593893 | - | 3870 | WP_058805828.1 | hypothetical protein | VF |
| PTQ22_RS17480 () | 3593927..3594358 | - | 432 | WP_000227044.1 | Shiga toxin A subunit | - |
| PTQ22_RS17485 () | 3594560..3595333 | - | 774 | WP_023197900.1 | Rap1a/Tai family immunity protein | - |
| PTQ22_RS17490 () | 3595338..3596642 | - | 1305 | WP_000132483.1 | hypothetical protein | VF |
| PTQ22_RS17495 () | 3596639..3597982 | - | 1344 | WP_000118729.1 | hypothetical protein | VF |
| PTQ22_RS17500 () | 3597986..3598522 | - | 537 | WP_023255344.1 | hypothetical protein | VF |
| PTQ22_RS17505 () | 3598589..3599074 | - | 486 | WP_000119443.1 | hypothetical protein | VF |
| PTQ22_RS17510 () | 3599217..3599600 | - | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| PTQ22_RS17515 () | 3599585..3600070 | - | 486 | WP_058805829.1 | type VI secretion system amidase effector protein Tae4 | - |
| PTQ22_RS17520 () | 3600113..3600306 | - | 194 | Protein_3434 | type VI secretion system lipoprotein TssJ | - |
| PTQ22_RS17525 () | 3600374..3600859 | - | 486 | WP_000312802.1 | hypothetical protein | VF |
| PTQ22_RS17530 () | 3601113..3601445 | - | 333 | WP_077905251.1 | hypothetical protein | - |
| PTQ22_RS17535 () | 3601572..3601682 | - | 111 | WP_010988967.1 | BPSL0067 family protein | - |
| PTQ22_RS17540 () | 3601745..3603253 | - | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| PTQ22_RS17545 () | 3603277..3603819 | - | 543 | WP_000996815.1 | type VI secretion system contractile sheath small subunit | - |
| PTQ22_RS17550 () | 3603919..3606558 | - | 2640 | WP_058805830.1 | type VI secretion system ATPase TssH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|