MGE detailed information
MGE type: Genomic_island MGE length: 40947 bp
Accession: NZ_CP117693 Location: 3559972..3600918 Organism: Salmonella enterica subsp. enterica serovar London strain S1 Replicon: chromosome
Accession: NZ_CP117693 Location: 3559972..3600918 Organism: Salmonella enterica subsp. enterica serovar London strain S1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PTQ18_RS17310 () | 3555543..3557987 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| PTQ18_RS17315 () | 3558096..3558863 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| PTQ18_RS17320 () | 3559234..3559641 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| PTQ18_RS17325 () | 3559972..3560691 | + | 720 | WP_000787603.1 | hypothetical protein | VF |
| PTQ18_RS17330 () | 3560695..3560910 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| PTQ18_RS17335 () | 3561030..3561977 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| PTQ18_RS17340 () | 3562471..3562711 | - | 241 | Protein_3396 | PerC family transcriptional regulator | - |
| PTQ18_RS17345 () | 3562794..3563604 | - | 811 | Protein_3397 | hypothetical protein | VF |
| PTQ18_RS17350 () | 3564010..3564480 | - | 471 | WP_023255137.1 | AfaD family invasin | - |
| PTQ18_RS17355 () | 3564502..3567012 | - | 2511 | WP_023255136.1 | hypothetical protein | VF |
| PTQ18_RS17360 () | 3567036..3567773 | - | 738 | WP_058805822.1 | hypothetical protein | VF |
| PTQ18_RS17365 () | 3567857..3568351 | - | 495 | WP_187788956.1 | pilus assembly protein | - |
| PTQ18_RS17370 () | 3569116..3569817 | - | 702 | Protein_3402 | integrase core domain-containing protein | - |
| PTQ18_RS17375 () | 3569870..3570184 | + | 315 | WP_011233128.1 | SymE family type I addiction module toxin | - |
| PTQ18_RS17380 () | 3570251..3570529 | - | 279 | WP_077905025.1 | hypothetical protein | - |
| PTQ18_RS17385 () | 3570845..3571312 | - | 468 | WP_000828173.1 | sugar tyrosine-protein kinase | - |
| PTQ18_RS17390 () | 3572184..3572417 | - | 234 | WP_129374720.1 | hypothetical protein | - |
| - | 3572594..3572975 | - | 382 | - | - | Antitoxin Detail |
| PTQ18_RS17395 () | 3572751..3573026 | + | 276 | WP_058805824.1 | SymE family type I addiction module toxin | Toxin Detail |
| PTQ18_RS17400 () | 3573071..3573388 | - | 318 | WP_129374721.1 | hypothetical protein | - |
| PTQ18_RS17405 () | 3573354..3574637 | - | 1284 | Protein_3409 | Putative membrane-bound redox modulator Alx | VF |
| PTQ18_RS17410 () | 3574774..3575238 | - | 465 | WP_223152163.1 | hypothetical protein | - |
| PTQ18_RS17415 () | 3575216..3578047 | - | 2832 | WP_058805826.1 | RHS repeat-associated core domain-containing protein | - |
| PTQ18_RS17420 () | 3578098..3578376 | + | 279 | Protein_3412 | SymE family type I addiction module toxin | - |
| PTQ18_RS17425 () | 3578535..3579401 | - | 867 | WP_049868168.1 | leucine-rich repeat domain-containing protein | - |
| PTQ18_RS17430 () | 3579392..3583492 | - | 4101 | WP_223195405.1 | RHS repeat-associated core domain-containing protein | - |
| PTQ18_RS17435 () | 3583511..3583958 | - | 448 | Protein_3415 | DcrB-related protein | - |
| PTQ18_RS17440 () | 3583982..3586171 | - | 2190 | WP_058805827.1 | Methyl-accepting chemotaxis protein McpA | VF |
| PTQ18_RS17445 () | 3586568..3587089 | - | 522 | WP_077946913.1 | DUF2778 domain-containing protein | - |
| PTQ18_RS17450 () | 3587113..3587529 | - | 417 | WP_001596567.1 | DUF2195 family protein | - |
| PTQ18_RS17455 () | 3587526..3587621 | - | 96 | Protein_3419 | hypothetical protein | - |
| PTQ18_RS17460 () | 3587657..3588118 | - | 462 | WP_001674711.1 | hypothetical protein | - |
| PTQ18_RS17465 () | 3588103..3588573 | - | 471 | WP_000528843.1 | glucosaminidase domain-containing protein | - |
| PTQ18_RS17470 () | 3588616..3589383 | - | 768 | WP_001254127.1 | TagF domain-containing protein | - |
| PTQ18_RS17475 () | 3589383..3593252 | - | 3870 | WP_058805828.1 | Putative aliphatic sulfonates transport permease protein SsuC | VF |
| PTQ18_RS17480 () | 3593286..3593717 | - | 432 | WP_000227044.1 | Shiga toxin A subunit | - |
| PTQ18_RS17485 () | 3593919..3594692 | - | 774 | WP_023197900.1 | Rap1a/Tai family immunity protein | - |
| PTQ18_RS17490 () | 3594697..3596001 | - | 1305 | WP_000132483.1 | Deoxyribose-phosphate aldolase | VF |
| PTQ18_RS17495 () | 3595998..3597341 | - | 1344 | WP_000118729.1 | Sporulation kinase E | VF |
| PTQ18_RS17500 () | 3597345..3597881 | - | 537 | WP_023255344.1 | hypothetical protein | VF |
| PTQ18_RS17505 () | 3597948..3598433 | - | 486 | WP_000119443.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| PTQ18_RS17510 () | 3598576..3598959 | - | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| PTQ18_RS17515 () | 3598944..3599429 | - | 486 | WP_058805829.1 | type VI secretion system amidase effector protein Tae4 | - |
| PTQ18_RS17520 () | 3599472..3599665 | - | 194 | Protein_3432 | type VI secretion system lipoprotein TssJ | - |
| PTQ18_RS17525 () | 3599733..3600218 | - | 486 | WP_000312802.1 | Inner membrane ABC transporter permease protein YdcV | VF |
| PTQ18_RS17530 () | 3600472..3600804 | - | 333 | WP_077905251.1 | hypothetical protein | - |
| PTQ18_RS17535 () | 3600931..3601041 | - | 111 | WP_010988967.1 | BPSL0067 family protein | - |
| PTQ18_RS17540 () | 3601104..3602612 | - | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| PTQ18_RS17545 () | 3602636..3603178 | - | 543 | WP_000996815.1 | type VI secretion system contractile sheath small subunit | - |
| PTQ18_RS17550 () | 3603278..3605917 | - | 2640 | WP_058805830.1 | type VI secretion system ATPase TssH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|