MGE detailed information
MGE type: Prophage MGE length: 43500 bp
Accession: NZ_CP117693 Location: 1932569..1976068 Organism: Salmonella enterica subsp. enterica serovar London strain S1 Replicon: chromosome
Accession: NZ_CP117693 Location: 1932569..1976068 Organism: Salmonella enterica subsp. enterica serovar London strain S1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PTQ18_RS09195 () | 1927625..1928077 | + | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
| PTQ18_RS09200 () | 1928107..1928847 | + | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| PTQ18_RS09205 () | 1928884..1929405 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| PTQ18_RS09210 () | 1929407..1930006 | - | 600 | WP_000716749.1 | YebB family permuted papain-like enzyme | - |
| PTQ18_RS09215 () | 1930633..1931529 | - | 897 | WP_001597478.1 | DUF4034 domain-containing protein | - |
| PTQ18_RS09220 () | 1931949..1932560 | + | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| PTQ18_RS09225 () | 1932569..1933579 | + | 1011 | WP_000568504.1 | Holliday junction branch migration DNA helicase RuvB | - |
| PTQ18_RS09230 () | 1933658..1934443 | - | 786 | WP_000571510.1 | hypothetical protein | VF |
| PTQ18_RS09235 () | 1934440..1935195 | - | 756 | WP_000203023.1 | Protein YukE | VF |
| PTQ18_RS09240 () | 1935274..1936218 | + | 945 | WP_058805642.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| PTQ18_RS09245 () | 1936234..1937553 | + | 1320 | WP_001184032.1 | murein DD-endopeptidase MepM | - |
| PTQ18_RS09250 () | 1937670..1938638 | + | 969 | WP_000448400.1 | Lipid A biosynthesis myristoyltransferase | VF |
| PTQ18_RS09260 () | 1940029..1941471 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| PTQ18_RS09265 () | 1941595..1942464 | - | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| PTQ18_RS09270 () | 1942806..1944281 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| PTQ18_RS09275 () | 1944516..1946327 | + | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| PTQ18_RS09280 () | 1946365..1947006 | + | 642 | WP_000800495.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| PTQ18_RS09285 () | 1947106..1948284 | - | 1179 | WP_058805752.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| PTQ18_RS09290 () | 1948415..1948705 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| PTQ18_RS09295 () | 1948773..1949126 | + | 354 | WP_001042123.1 | protein YebF | - |
| PTQ18_RS09300 () | 1949220..1949879 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| PTQ18_RS09305 () | 1950092..1952143 | + | 2052 | WP_000936990.1 | oligopeptidase B | - |
| PTQ18_RS09310 () | 1952180..1952878 | - | 699 | WP_023255939.1 | exodeoxyribonuclease X | - |
| PTQ18_RS09315 () | 1952902..1953558 | - | 657 | WP_023245437.1 | carbon-nitrogen hydrolase family protein | - |
| PTQ18_RS09320 () | 1953666..1953896 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| PTQ18_RS09325 () | 1954034..1954408 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| PTQ18_RS09330 () | 1954409..1955284 | + | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| PTQ18_RS09335 () | 1955301..1955654 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 1955756..1955899 | - | 144 | - | - | Antitoxin Detail |
| - | 1955795..1955897 | + | 103 | - | - | Toxin Detail |
| PTQ18_RS09340 () | 1956037..1957116 | - | 1080 | WP_058107134.1 | hypothetical protein ; Integrase | Integrase |
| PTQ18_RS09345 () | 1957149..1958300 | - | 1152 | Protein_1825 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| PTQ18_RS09350 () | 1958289..1958480 | + | 192 | Protein_1826 | glycoside hydrolase family 19 protein | - |
| PTQ18_RS09355 () | 1958534..1959067 | + | 534 | WP_023256014.1 | DUF2514 domain-containing protein | - |
| PTQ18_RS09360 () | 1959324..1959491 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| PTQ18_RS09365 () | 1959556..1959744 | - | 189 | WP_001034748.1 | hypothetical protein | - |
| PTQ18_RS09370 () | 1959799..1960059 | + | 261 | Protein_1830 | DUF1441 family protein | - |
| PTQ18_RS09375 () | 1960061..1960276 | + | 216 | Protein_1831 | shikimate transporter | - |
| PTQ18_RS09380 () | 1960286..1960573 | + | 288 | Protein_1832 | macro domain-containing protein | - |
| PTQ18_RS09385 () | 1960586..1961097 | + | 512 | Protein_1833 | tail fiber assembly protein | - |
| PTQ18_RS09390 () | 1961194..1961394 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| PTQ18_RS09395 () | 1961784..1961964 | - | 181 | Protein_1835 | IS3 family transposase | - |
| PTQ18_RS09400 () | 1961964..1962089 | + | 126 | WP_000457876.1 | hypothetical protein | - |
| PTQ18_RS09405 () | 1962743..1962910 | + | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| PTQ18_RS09410 () | 1963237..1963851 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| PTQ18_RS09415 () | 1963861..1964019 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| PTQ18_RS09420 () | 1964152..1965066 | - | 915 | WP_001233445.1 | DMT family transporter | - |
| PTQ18_RS09425 () | 1966352..1966774 | - | 423 | Protein_1841 | Nitrogenase iron-iron protein alpha chain ; Integrase | Integrase |
| PTQ18_RS09430 () | 1966844..1968038 | + | 1195 | Protein_1842 | IS256 family transposase IS285 | Transposase |
| PTQ18_RS09435 () | 1968184..1968324 | - | 141 | WP_038390064.1 | hypothetical protein | - |
| PTQ18_RS09440 () | 1968490..1968759 | - | 270 | WP_077914367.1 | hypothetical protein | - |
| PTQ18_RS09445 () | 1969130..1969549 | + | 420 | WP_000354407.1 | GNAT family N-acetyltransferase | - |
| PTQ18_RS09450 () | 1969922..1970398 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| PTQ18_RS09455 () | 1970728..1971123 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| PTQ18_RS09460 () | 1971807..1972529 | + | 723 | WP_000182072.1 | Alkyl hydroperoxide reductase C | VF |
| PTQ18_RS09465 () | 1972814..1972978 | + | 165 | WP_001134856.1 | membrane protein | - |
| PTQ18_RS09470 () | 1973202..1973852 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| PTQ18_RS09475 () | 1973871..1974062 | - | 192 | WP_000457836.1 | YebW family protein | - |
| PTQ18_RS09480 () | 1974173..1974409 | - | 237 | WP_024131108.1 | YebV family protein | - |
| PTQ18_RS09485 () | 1974527..1975966 | - | 1440 | WP_001531515.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| PTQ18_RS09490 () | 1976044..1978677 | - | 2634 | WP_001521100.1 | PqiB family protein | - |
| PTQ18_RS09495 () | 1978646..1979929 | - | 1284 | WP_001207293.1 | membrane integrity lipid transport subunit YebS | - |
| PTQ18_RS09500 () | 1980058..1980555 | + | 498 | WP_058805750.1 | GAF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|