MGE detailed information
MGE type: Prophage MGE length: 76936 bp
Accession: NZ_CP117672 Location: 3736670..3813605 Organism: Escherichia coli strain KW21 Replicon: chromosome
Accession: NZ_CP117672 Location: 3736670..3813605 Organism: Escherichia coli strain KW21 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PSR34_RS18195 (3732706) | 3732706..3733662 | + | 957 | WP_000121333.1 | molybdenum cofactor insertion chaperone PaoD | - |
| PSR34_RS18200 (3733713) | 3733713..3734051 | + | 339 | Protein_3561 | LysR substrate-binding domain-containing protein | - |
| PSR34_RS18205 (3734729) | 3734729..3735061 | - | 333 | WP_001349760.1 | FlxA-like family protein | - |
| PSR34_RS18210 (3735264) | 3735264..3735479 | - | 216 | Protein_3563 | protein YdfV | - |
| PSR34_RS18215 (3735550) | 3735550..3735636 | - | 87 | Protein_3564 | capsid protein | - |
| PSR34_RS18220 (3735841) | 3735841..3736612 | + | 772 | Protein_3565 | hypothetical protein | - |
| PSR34_RS18225 (3736670) | 3736670..3737224 | - | 555 | WP_000904981.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| PSR34_RS18230 (3737251) | 3737251..3737640 | + | 390 | WP_111975848.1 | phage tail protein | - |
| PSR34_RS18235 (3737646) | 3737646..3738065 | + | 420 | WP_024198278.1 | tail fiber assembly protein | - |
| PSR34_RS18240 (3738037) | 3738037..3738642 | - | 606 | WP_000158700.1 | tail fiber assembly protein | - |
| PSR34_RS18245 (3738642) | 3738642..3739403 | - | 762 | WP_040091762.1 | phage tail protein | - |
| PSR34_RS18250 (3739407) | 3739407..3739991 | - | 585 | WP_000383566.1 | YmfQ family protein | - |
| PSR34_RS18255 (3739982) | 3739982..3741040 | - | 1059 | WP_000785324.1 | baseplate J/gp47 family protein | - |
| PSR34_RS18260 (3741027) | 3741027..3741452 | - | 426 | WP_000424732.1 | phage GP46 family protein | - |
| PSR34_RS18265 (3741452) | 3741452..3742000 | - | 549 | WP_001259074.1 | phage baseplate assembly protein V | - |
| PSR34_RS18270 (3742000) | 3742000..3743079 | - | 1080 | WP_000999511.1 | baseplate protein | - |
| PSR34_RS18275 (3743076) | 3743076..3744404 | - | 1329 | WP_040091763.1 | DNA circularization N-terminal domain-containing protein | - |
| PSR34_RS18280 (3744465) | 3744465..3746300 | - | 1836 | WP_000807211.1 | phage tail tape measure protein | - |
| PSR34_RS18285 (3746442) | 3746442..3746711 | - | 270 | WP_000661047.1 | phage tail assembly protein | - |
| PSR34_RS18290 (3746711) | 3746711..3747067 | - | 357 | WP_000090998.1 | phage tail tube protein | - |
| PSR34_RS18295 (3747067) | 3747067..3748563 | - | 1497 | WP_040091764.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| PSR34_RS18300 (3748547) | 3748547..3748717 | - | 171 | WP_000497751.1 | DUF2635 domain-containing protein | - |
| PSR34_RS18305 (3748726) | 3748726..3749286 | - | 561 | WP_000779293.1 | hypothetical protein | - |
| PSR34_RS18310 (3749283) | 3749283..3749789 | - | 507 | WP_000224836.1 | hypothetical protein | - |
| PSR34_RS18315 (3749764) | 3749764..3750174 | - | 411 | WP_000702395.1 | phage head closure protein | - |
| PSR34_RS18320 (3750171) | 3750171..3750494 | - | 324 | WP_000927711.1 | head-tail connector protein | - |
| PSR34_RS18325 (3750497) | 3750497..3750697 | - | 201 | WP_000601365.1 | hypothetical protein | - |
| PSR34_RS18330 (3750746) | 3750746..3751951 | - | 1206 | WP_040091765.1 | phage major capsid protein | - |
| PSR34_RS18335 (3751966) | 3751966..3752616 | - | 651 | WP_001193634.1 | HK97 family phage prohead protease | - |
| PSR34_RS18340 (3752594) | 3752594..3753835 | - | 1242 | WP_000466255.1 | phage portal protein | - |
| PSR34_RS18345 (3753835) | 3753835..3754017 | - | 183 | WP_000605614.1 | protein YmfR | - |
| PSR34_RS18350 (3754029) | 3754029..3755762 | - | 1734 | WP_000088150.1 | terminase large subunit | - |
| PSR34_RS18355 (3755759) | 3755759..3756253 | - | 495 | WP_122986103.1 | phage terminase small subunit P27 family | - |
| PSR34_RS18360 (3756379) | 3756379..3756729 | - | 351 | WP_001752112.1 | HNH endonuclease | - |
| PSR34_RS18365 (3756857) | 3756857..3757231 | + | 375 | WP_079831197.1 | hypothetical protein | - |
| PSR34_RS18370 (3757310) | 3757310..3757558 | - | 249 | WP_122986104.1 | peptidase | - |
| PSR34_RS18375 (3757443) | 3757443..3757835 | - | 393 | WP_079831195.1 | DUF2570 domain-containing protein | - |
| PSR34_RS18380 (3757819) | 3757819..3758295 | - | 477 | WP_027661775.1 | glycoside hydrolase family 104 protein | - |
| PSR34_RS18385 (3758299) | 3758299..3758634 | - | 336 | WP_027661774.1 | phage holin, lambda family | - |
| PSR34_RS18390 (3758712) | 3758712..3759764 | - | 1053 | WP_072731120.1 | site-specific DNA-methyltransferase | - |
| PSR34_RS18395 (3759915) | 3759915..3760118 | - | 204 | WP_000917724.1 | hypothetical protein | - |
| PSR34_RS18400 (3760371) | 3760371..3761123 | - | 753 | WP_063501593.1 | antitermination protein | - |
| PSR34_RS18405 (3761137) | 3761137..3762126 | - | 990 | WP_063501594.1 | DUF968 domain-containing protein | - |
| PSR34_RS18410 (3762134) | 3762134..3762943 | - | 810 | WP_001061444.1 | KilA-N domain-containing protein | - |
| PSR34_RS18415 (3762963) | 3762963..3763352 | - | 390 | WP_022296585.1 | RusA family crossover junction endodeoxyribonuclease | - |
| PSR34_RS18420 (3763349) | 3763349..3763675 | - | 327 | WP_000210137.1 | LexA family transcriptional regulator | - |
| PSR34_RS18425 (3763672) | 3763672..3764325 | - | 654 | WP_001348004.1 | phage N-6-adenine-methyltransferase | - |
| PSR34_RS18430 (3764325) | 3764325..3764819 | - | 495 | WP_021576994.1 | PerC family transcriptional regulator | - |
| PSR34_RS18435 (3764816) | 3764816..3765757 | - | 942 | WP_000104972.1 | helix-turn-helix domain-containing protein | - |
| PSR34_RS18440 (3765747) | 3765747..3765926 | - | 180 | WP_001250269.1 | DUF4222 domain-containing protein | - |
| PSR34_RS18445 (3766102) | 3766102..3766653 | - | 552 | WP_000515845.1 | protein YmfL | - |
| PSR34_RS18450 (3766646) | 3766646..3766906 | - | 261 | WP_001191674.1 | helix-turn-helix transcriptional regulator | - |
| PSR34_RS18455 (3767004) | 3767004..3767696 | + | 693 | WP_001020634.1 | S24 family peptidase | - |
| PSR34_RS18460 (3768036) | 3768036..3768242 | + | 207 | WP_000549623.1 | hypothetical protein | - |
| PSR34_RS18465 (3768214) | 3768214..3768648 | - | 435 | WP_000016389.1 | hypothetical protein | - |
| PSR34_RS18470 (3768792) | 3768792..3769102 | + | 311 | Protein_3615 | hypothetical protein | - |
| PSR34_RS18475 (3769117) | 3769117..3769479 | + | 363 | WP_000135682.1 | protein YfdP | - |
| PSR34_RS18480 (3769545) | 3769545..3770369 | + | 825 | WP_000081292.1 | YfdQ family protein | - |
| PSR34_RS18485 (3770497) | 3770497..3771033 | + | 537 | WP_000008200.1 | 5'-deoxynucleotidase | - |
| PSR34_RS18490 (3771024) | 3771024..3771386 | + | 363 | WP_001242749.1 | phage protein | - |
| PSR34_RS18495 (3771386) | 3771386..3771691 | + | 306 | WP_000206732.1 | protein YfdT | - |
| PSR34_RS18500 (3771607) | 3771607..3772041 | + | 435 | WP_077873866.1 | helix-turn-helix domain-containing protein | - |
| PSR34_RS18505 (3771963) | 3771963..3773081 | + | 1119 | WP_239604403.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| PSR34_RS18515 (3773286) | 3773286..3774539 | - | 1254 | WP_000893255.1 | glutamate-5-semialdehyde dehydrogenase | - |
| PSR34_RS18520 (3774551) | 3774551..3775654 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| PSR34_RS18525 (3775942) | 3775942..3776997 | + | 1056 | WP_000749865.1 | phosphoporin PhoE | - |
| PSR34_RS18530 (3777036) | 3777036..3777437 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (3778155) | 3778155..3778235 | - | 81 | NuclAT_10 | - | - |
| - (3778155) | 3778155..3778235 | - | 81 | NuclAT_10 | - | - |
| - (3778155) | 3778155..3778235 | - | 81 | NuclAT_10 | - | - |
| - (3778155) | 3778155..3778235 | - | 81 | NuclAT_10 | - | - |
| PSR34_RS18535 (3777495) | 3777495..3778739 | - | 1245 | WP_000189543.1 | esterase FrsA | - |
| PSR34_RS18540 (3778831) | 3778831..3779289 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| PSR34_RS18545 (3779550) | 3779550..3781007 | + | 1458 | WP_001293016.1 | cytosol nonspecific dipeptidase | - |
| PSR34_RS18550 (3781064) | 3781064..3781678 | - | 615 | WP_000602112.1 | peptide chain release factor H | - |
| PSR34_RS18555 (3781675) | 3781675..3782814 | - | 1140 | WP_000528869.1 | RNA ligase RtcB family protein | - |
| PSR34_RS18560 (3783060) | 3783060..3783512 | - | 453 | WP_001059855.1 | GNAT family N-acetyltransferase | - |
| PSR34_RS18565 (3783509) | 3783509..3784564 | - | 1056 | WP_001226182.1 | DNA polymerase IV | - |
| PSR34_RS18570 (3784635) | 3784635..3785420 | - | 786 | WP_000207568.1 | hypothetical protein | VF |
| PSR34_RS18575 (3785392) | 3785392..3787104 | + | 1713 | Protein_3635 | hypothetical protein | VF |
| PSR34_RS18580 (3787209) | 3787209..3787487 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| PSR34_RS18585 (3787480) | 3787480..3787836 | + | 357 | WP_001030484.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| PSR34_RS18590 (3787893) | 3787893..3788666 | - | 774 | WP_000543899.1 | hypothetical protein | VF |
| PSR34_RS18595 (3788852) | 3788852..3789112 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| PSR34_RS18600 (3789115) | 3789115..3789393 | + | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| PSR34_RS18605 (3789549) | 3789549..3790289 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| PSR34_RS18610 (3790260) | 3790260..3791027 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| PSR34_RS18615 (3791233) | 3791233..3791811 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| PSR34_RS18620 (3792051) | 3792051..3794495 | + | 2445 | WP_000973065.1 | Crotonobetainyl-CoA dehydrogenase | VF |
| PSR34_RS18625 (3794538) | 3794538..3794984 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| PSR34_RS18630 (3795165) | 3795165..3795935 | + | 771 | WP_001118030.1 | 2-oxoglutaramate amidase | - |
| PSR34_RS18640 (3796243) | 3796243..3796974 | - | 732 | WP_001366128.1 | DNA polymerase III subunit epsilon | - |
| PSR34_RS18645 (3797039) | 3797039..3797506 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| PSR34_RS18650 (3797503) | 3797503..3798225 | - | 723 | WP_001295200.1 | class I SAM-dependent methyltransferase | - |
| PSR34_RS18655 (3798259) | 3798259..3799014 | + | 756 | WP_001052707.1 | hydroxyacylglutathione hydrolase | - |
| PSR34_RS18660 (3799086) | 3799086..3800444 | + | 1359 | WP_000644685.1 | hypothetical protein | VF |
| PSR34_RS18665 (3800492) | 3800492..3801262 | - | 771 | WP_023155852.1 | class I SAM-dependent methyltransferase | - |
| PSR34_RS18670 (3801340) | 3801340..3802140 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| PSR34_RS18675 (3802381) | 3802381..3803295 | + | 915 | WP_023155851.1 | HTH-type transcriptional regulator ArgP | VF |
| PSR34_RS18680 (3803292) | 3803292..3803462 | - | 171 | Protein_3655 | 2,5-didehydrogluconate reductase DkgB | - |
| PSR34_RS18685 (3803473) | 3803473..3804111 | - | 639 | Protein_3656 | ISAs1 family transposase ISEc1 | Transposase |
| PSR34_RS18695 (3804882) | 3804882..3805385 | - | 504 | Protein_3658 | ISAs1 family transposase ISEc1 | Transposase |
| PSR34_RS18700 (3805842) | 3805842..3806372 | - | 531 | WP_023155453.1 | hypothetical protein | - |
| PSR34_RS18705 (3806385) | 3806385..3810896 | - | 4512 | WP_001402129.1 | RHS repeat-associated core domain-containing protein | - |
| PSR34_RS18710 (3810927) | 3810927..3811358 | - | 432 | WP_001402128.1 | DcrB-related protein | - |
| PSR34_RS18715 (3811386) | 3811386..3813605 | - | 2220 | WP_219900263.1 | hypothetical protein | VF |
| PSR34_RS18720 (3813630) | 3813630..3813977 | - | 348 | WP_100224276.1 | hypothetical protein | - |
| PSR34_RS18725 (3813998) | 3813998..3814726 | - | 729 | WP_023155449.1 | hypothetical protein | - |
| PSR34_RS18730 (3814781) | 3814781..3815557 | - | 777 | WP_024166652.1 | TagF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|