MGE detailed information
MGE type: Prophage MGE length: 57061 bp
Accession: NZ_CP117668 Location: 1121631..1178691 Organism: Escherichia albertii strain BIA_11 Replicon: chromosome
Accession: NZ_CP117668 Location: 1121631..1178691 Organism: Escherichia albertii strain BIA_11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS054_RS05830 () | 1116756..1117427 | - | 672 | WP_000698220.1 | response regulator transcription factor HprR | - |
| PS054_RS05835 () | 1117559..1117972 | + | 414 | WP_000920114.1 | hydroxyisourate hydrolase | - |
| PS054_RS05840 () | 1118081..1119085 | + | 1005 | WP_000794432.1 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
| PS054_RS05845 () | 1119086..1119721 | + | 636 | WP_001240066.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| PS054_RS05850 () | 1119850..1120500 | + | 651 | WP_000235605.1 | metal-binding protein ZinT | - |
| PS054_RS05855 () | 1121631..1122284 | + | 654 | WP_054411339.1 | hypothetical protein | VF |
| PS054_RS05860 () | 1122609..1123760 | + | 1152 | WP_273814982.1 | Secreted effector protein EspF(U) | VF |
| PS054_RS05865 () | 1124107..1125125 | - | 1019 | Protein_1160 | hypothetical protein | VF |
| PS054_RS05870 () | 1125352..1127724 | - | 2373 | WP_273814984.1 | hypothetical protein | VF |
| PS054_RS05875 () | 1127776..1128363 | - | 588 | WP_273814986.1 | hypothetical protein | VF |
| PS054_RS05880 () | 1128573..1128842 | - | 270 | WP_062859942.1 | phage tail fiber C-terminal domain-containing protein | - |
| PS054_RS05885 () | 1128844..1130157 | - | 1314 | WP_273814987.1 | ISNCY family transposase KIS | Transposase |
| PS054_RS05890 () | 1130218..1133715 | - | 3498 | WP_273815481.1 | host specificity protein J | - |
| PS054_RS05895 () | 1133776..1134348 | - | 573 | WP_263774607.1 | tail assembly protein | - |
| PS054_RS05900 () | 1134345..1135088 | - | 744 | WP_273814335.1 | C40 family peptidase | - |
| PS054_RS05905 () | 1135093..1135791 | - | 699 | WP_273814989.1 | phage minor tail protein L | - |
| PS054_RS05910 () | 1135791..1136120 | - | 330 | WP_000847354.1 | phage tail protein | - |
| PS054_RS05915 () | 1136117..1138678 | - | 2562 | WP_273814331.1 | phage tail tape measure protein | - |
| PS054_RS05920 () | 1138671..1139096 | - | 426 | WP_059222279.1 | phage tail assembly protein T | - |
| PS054_RS05925 () | 1139078..1139500 | - | 423 | WP_273781013.1 | phage minor tail protein G | - |
| PS054_RS05930 () | 1139516..1140256 | - | 741 | WP_273814329.1 | phage tail protein | - |
| PS054_RS05935 () | 1140264..1140659 | - | 396 | WP_273814327.1 | phage minor tail U family protein | - |
| PS054_RS05940 () | 1140656..1141234 | - | 579 | WP_273781017.1 | phage tail protein | - |
| PS054_RS05945 () | 1141246..1141599 | - | 354 | WP_137651319.1 | head-tail joining protein | - |
| PS054_RS05950 () | 1141611..1142006 | - | 396 | WP_256877469.1 | DNA-packaging protein FI | - |
| PS054_RS05955 () | 1142049..1143074 | - | 1026 | WP_273814325.1 | major capsid protein | - |
| PS054_RS05960 () | 1143130..1143462 | - | 333 | WP_001299443.1 | head decoration protein | - |
| PS054_RS05965 () | 1143472..1144791 | - | 1320 | WP_273814323.1 | S49 family peptidase | - |
| PS054_RS05970 () | 1144772..1146373 | - | 1602 | Protein_1181 | phage portal protein | - |
| PS054_RS05975 () | 1146370..1146576 | - | 207 | WP_000198149.1 | gpW family protein | - |
| PS054_RS05980 () | 1146573..1148498 | - | 1926 | WP_273814321.1 | phage terminase large subunit family protein | - |
| PS054_RS05985 () | 1148473..1149018 | - | 546 | WP_273814992.1 | DNA-packaging protein | - |
| PS054_RS05990 () | 1149417..1149554 | + | 138 | WP_059222288.1 | DUF3950 domain-containing protein | - |
| PS054_RS05995 () | 1149723..1150037 | - | 315 | WP_059222289.1 | PerC family transcriptional regulator | - |
| PS054_RS06000 () | 1150584..1150769 | - | 186 | WP_123059795.1 | Rz1 family lipoprotein | - |
| PS054_RS06005 () | 1150986..1151483 | - | 498 | WP_032274775.1 | lysozyme RrrD | - |
| PS054_RS06010 () | 1151483..1151698 | - | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| PS054_RS06015 () | 1152414..1152977 | + | 564 | WP_024246368.1 | DUF1440 domain-containing protein | - |
| PS054_RS06040 () | 1153661..1154350 | - | 690 | WP_059222310.1 | bacteriophage antitermination protein Q | - |
| PS054_RS06045 () | 1154347..1154712 | - | 366 | WP_054413016.1 | RusA family crossover junction endodeoxyribonuclease | - |
| PS054_RS06050 () | 1154713..1155768 | - | 1056 | WP_059259435.1 | DUF968 domain-containing protein | - |
| PS054_RS06055 () | 1155770..1156048 | - | 279 | WP_059225803.1 | hypothetical protein | - |
| PS054_RS06060 () | 1156216..1156371 | - | 156 | WP_001406737.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - | 1156383..1156441 | + | 59 | - | - | Antitoxin Detail |
| PS054_RS06065 () | 1156583..1156711 | - | 129 | WP_256876870.1 | hypothetical protein | - |
| PS054_RS06070 () | 1156922..1157119 | - | 198 | Protein_1197 | DUF551 domain-containing protein | - |
| PS054_RS06075 () | 1157266..1157673 | - | 408 | WP_059259431.1 | hypothetical protein | - |
| PS054_RS06080 () | 1157832..1158248 | - | 417 | WP_059274262.1 | DUF977 family protein | - |
| PS054_RS06085 () | 1158256..1159017 | - | 762 | WP_059225509.1 | DUF1627 domain-containing protein | - |
| PS054_RS06090 () | 1159041..1159787 | - | 747 | WP_113650040.1 | ATP-binding protein | - |
| PS054_RS06095 () | 1159794..1160756 | - | 963 | WP_131110102.1 | helix-turn-helix domain-containing protein | - |
| PS054_RS06100 () | 1160780..1161205 | - | 426 | WP_059259424.1 | toxin YdaT family protein | - |
| PS054_RS06105 () | 1161228..1161524 | - | 297 | WP_059217915.1 | toxin YdaS | - |
| PS054_RS06110 () | 1161648..1162124 | + | 477 | WP_059222065.1 | DNA-binding transcriptional repressor RacR | - |
| PS054_RS06115 () | 1162441..1162593 | + | 153 | WP_000379569.1 | DUF1391 family protein | - |
| PS054_RS06120 () | 1162605..1163243 | + | 639 | WP_059222115.1 | hypothetical protein | - |
| PS054_RS06125 () | 1163244..1163453 | - | 210 | WP_001133037.1 | hypothetical protein | - |
| PS054_RS06130 () | 1164022..1164243 | + | 222 | WP_000560212.1 | cell division protein FtsZ | - |
| PS054_RS06135 () | 1164367..1166838 | + | 2472 | WP_059259422.1 | exonuclease | - |
| PS054_RS06140 () | 1166897..1167100 | + | 204 | WP_000096344.1 | DUF4224 domain-containing protein | - |
| PS054_RS06145 () | 1167100..1168150 | + | 1051 | Protein_1212 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PS054_RS06155 () | 1168361..1169158 | + | 798 | WP_024164886.1 | DgsA anti-repressor MtfA | - |
| PS054_RS06165 () | 1169374..1170324 | - | 951 | WP_273814994.1 | HTH-type transcriptional regulator Cbl | - |
| PS054_RS06170 () | 1170442..1170876 | - | 435 | Protein_1215 | LysR family transcriptional regulator | - |
| PS054_RS06180 () | 1171438..1171608 | + | 171 | Protein_1216 | Arm DNA-binding domain-containing protein | - |
| PS054_RS06185 () | 1171927..1172622 | + | 696 | Protein_1217 | Protein RhsC | VF |
| PS054_RS06190 () | 1173030..1174343 | + | 1314 | WP_059224838.1 | shikimate transporter | - |
| PS054_RS06195 () | 1174445..1175899 | + | 1455 | WP_025238820.1 | AMP nucleosidase | - |
| PS054_RS06205 () | 1176204..1177690 | + | 1487 | Protein_1220 | EmmdR/YeeO family multidrug/toxin efflux MATE transporter | - |
| PS054_RS06215 () | 1178023..1178547 | + | 525 | Protein_1221 | hypothetical protein ; Integrase | Integrase |
| PS054_RS06220 () | 1178548..1179001 | - | 454 | Protein_1222 | integrase domain-containing protein | - |
| PS054_RS06225 () | 1179287..1180222 | - | 936 | WP_124866051.1 | L,D-transpeptidase | - |
| PS054_RS06230 () | 1180395..1181138 | - | 744 | WP_000040008.1 | adenosylcobinamide-GDP ribazoletransferase | - |
| PS054_RS06235 () | 1181168..1181513 | - | 346 | Protein_1225 | bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | - |
| PS054_RS06240 () | 1181661..1182095 | - | 435 | WP_059222079.1 | hypothetical protein | - |
| PS054_RS06245 () | 1182572..1183486 | - | 915 | WP_000622051.1 | regulatory protein PocR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|