MGE detailed information
MGE type: Prophage MGE length: 23710 bp
Accession: NZ_CP117647 Location: 2055882..2079591 Organism: Escherichia albertii strain BIA_16-3 Replicon: chromosome
Accession: NZ_CP117647 Location: 2055882..2079591 Organism: Escherichia albertii strain BIA_16-3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS048_RS09950 () | 2052024..2053835 | + | 1812 | WP_001069473.1 | phosphogluconate dehydratase | - |
| PS048_RS09955 () | 2053874..2054515 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| PS048_RS09960 () | 2054570..2055748 | - | 1179 | WP_044708624.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| PS048_RS09965 () | 2055882..2056172 | + | 291 | WP_000257735.1 | DNA damage-inducible protein YebG | - |
| PS048_RS09970 () | 2056239..2056595 | + | 357 | WP_273786321.1 | protein YebF | - |
| PS048_RS09975 () | 2056909..2058966 | + | 2058 | WP_273786322.1 | oligopeptidase B | - |
| PS048_RS09980 () | 2058963..2059625 | - | 663 | WP_000944295.1 | exodeoxyribonuclease X | - |
| PS048_RS09985 () | 2059649..2059861 | - | 213 | Protein_1946 | carbon-nitrogen hydrolase family protein YobB | - |
| PS048_RS09990 () | 2060026..2060256 | - | 231 | WP_000916758.1 | DNA polymerase III subunit theta | - |
| PS048_RS09995 () | 2060395..2060772 | + | 378 | WP_137649720.1 | CopC domain-containing protein YobA | - |
| PS048_RS10000 () | 2060776..2061648 | + | 873 | WP_044708630.1 | copper homeostasis membrane protein CopD | - |
| PS048_RS10005 () | 2061661..2062002 | + | 342 | WP_072249985.1 | YebY family protein | - |
| - | 2062032..2062264 | - | 233 | - | - | Antitoxin Detail |
| - | 2062159..2062262 | + | 104 | - | - | Toxin Detail |
| PS048_RS10010 () | 2064018..2064338 | + | 321 | WP_273786325.1 | hypothetical protein | - |
| PS048_RS10015 () | 2064411..2065868 | + | 1458 | WP_024165002.1 | Trk system potassium transporter TrkG | - |
| PS048_RS10020 () | 2066187..2066978 | - | 792 | WP_273786327.1 | hypothetical protein | - |
| PS048_RS10025 () | 2066980..2067969 | - | 990 | WP_231932499.1 | hypothetical protein | - |
| PS048_RS10030 () | 2068297..2068743 | - | 447 | WP_273786329.1 | hypothetical protein | - |
| PS048_RS10035 () | 2068803..2069500 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| PS048_RS10040 () | 2069515..2069808 | - | 294 | Protein_1957 | hypothetical protein | - |
| PS048_RS10045 () | 2070069..2070725 | - | 657 | WP_273786331.1 | hypothetical protein | VF |
| PS048_RS10050 () | 2070930..2071364 | + | 435 | WP_273786333.1 | Effector protein NleF | VF |
| PS048_RS10055 () | 2071458..2072114 | + | 657 | WP_273786335.1 | protein-serine/threonine phosphatase | - |
| PS048_RS10060 () | 2072115..2072306 | - | 192 | WP_025238870.1 | YebW family protein | - |
| PS048_RS10065 () | 2072412..2072648 | - | 237 | WP_002462308.1 | DUF1480 family protein | - |
| PS048_RS10070 () | 2072765..2074204 | - | 1440 | WP_161983806.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| PS048_RS10075 () | 2074284..2076917 | - | 2634 | WP_273786337.1 | Intermembrane transport protein YebT | VF |
| PS048_RS10080 () | 2076886..2078169 | - | 1284 | WP_001207285.1 | membrane integrity lipid transport subunit YebS | - |
| PS048_RS10085 () | 2078299..2078796 | + | 498 | WP_059271755.1 | L-methionine (R)-S-oxide reductase | - |
| PS048_RS10090 () | 2078893..2079591 | + | 699 | WP_000431383.1 | RNA chaperone ProQ | - |
| PS048_RS10095 () | 2079611..2081659 | + | 2049 | WP_001055803.1 | carboxy terminal-processing peptidase | - |
| PS048_RS10100 () | 2081851..2082732 | + | 882 | WP_000984517.1 | protease HtpX | - |
| PS048_RS10105 () | 2082777..2084150 | - | 1374 | WP_059253330.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|