MGE detailed information
MGE type: Prophage MGE length: 48658 bp
Accession: NZ_CP117647 Location: 1906242..1954899 Organism: Escherichia albertii strain BIA_16-3 Replicon: chromosome
Accession: NZ_CP117647 Location: 1906242..1954899 Organism: Escherichia albertii strain BIA_16-3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS048_RS09080 () | 1903802..1903960 | - | 159 | Protein_1775 | Arm DNA-binding domain-containing protein | - |
| PS048_RS09090 () | 1904525..1904959 | + | 435 | Protein_1776 | LysR family transcriptional regulator | - |
| PS048_RS09095 () | 1905077..1906027 | + | 951 | WP_273786265.1 | HTH-type transcriptional regulator Cbl | - |
| PS048_RS09105 () | 1906242..1907039 | - | 798 | WP_024164886.1 | DgsA anti-repressor MtfA | - |
| PS048_RS09115 () | 1907250..1908300 | - | 1051 | Protein_1779 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PS048_RS09120 () | 1908300..1908503 | - | 204 | WP_000096344.1 | DUF4224 domain-containing protein | - |
| PS048_RS09125 () | 1908562..1911033 | - | 2472 | WP_262932756.1 | exonuclease | - |
| PS048_RS09130 () | 1911157..1911378 | - | 222 | WP_000560212.1 | cell division protein FtsZ | - |
| PS048_RS09135 () | 1911947..1912156 | + | 210 | WP_001133037.1 | hypothetical protein | - |
| PS048_RS09140 () | 1912157..1912795 | - | 639 | WP_059222115.1 | hypothetical protein | - |
| PS048_RS09145 () | 1912807..1912959 | - | 153 | WP_000379569.1 | DUF1391 family protein | - |
| PS048_RS09150 () | 1913229..1913903 | - | 675 | WP_232529580.1 | S24 family peptidase | - |
| PS048_RS09155 () | 1913995..1914210 | + | 216 | WP_000471549.1 | Cro/CI family transcriptional regulator | - |
| PS048_RS09160 () | 1914207..1914632 | + | 426 | WP_059260010.1 | toxin YdaT family protein | - |
| PS048_RS09165 () | 1914704..1915774 | + | 1071 | WP_062860011.1 | hypothetical protein | - |
| PS048_RS09170 () | 1915815..1916237 | + | 423 | WP_054413023.1 | DUF977 family protein | - |
| PS048_RS09175 () | 1916480..1917064 | + | 585 | WP_021559922.1 | XRE family transcriptional regulator | - |
| PS048_RS09180 () | 1917085..1917528 | - | 444 | WP_054413021.1 | acetyltransferase | - |
| - | 1918158..1918216 | - | 59 | - | - | Antitoxin Detail |
| PS048_RS09185 () | 1918228..1918383 | + | 156 | WP_001406737.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| PS048_RS09190 () | 1918551..1918829 | + | 279 | WP_059225803.1 | hypothetical protein | - |
| PS048_RS09195 () | 1918831..1919886 | + | 1056 | WP_059259435.1 | DUF968 domain-containing protein | - |
| PS048_RS09200 () | 1919887..1920252 | + | 366 | WP_054413016.1 | RusA family crossover junction endodeoxyribonuclease | - |
| PS048_RS09205 () | 1920249..1920938 | + | 690 | WP_062860010.1 | bacteriophage antitermination protein Q | - |
| PS048_RS09230 () | 1921622..1922185 | - | 564 | WP_024246368.1 | DUF1440 domain-containing protein | - |
| PS048_RS09235 () | 1922871..1923086 | + | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| PS048_RS09240 () | 1923086..1923583 | + | 498 | WP_032274775.1 | lysozyme RrrD | - |
| PS048_RS09245 () | 1923800..1923985 | + | 186 | WP_123059795.1 | Rz1 family lipoprotein | - |
| PS048_RS09250 () | 1924551..1924865 | + | 315 | WP_059222289.1 | PerC family transcriptional regulator | - |
| PS048_RS09255 () | 1925034..1925171 | - | 138 | WP_059222288.1 | DUF3950 domain-containing protein | - |
| PS048_RS09260 () | 1925569..1926114 | + | 546 | WP_059222287.1 | DNA-packaging protein | - |
| PS048_RS09265 () | 1926089..1928014 | + | 1926 | WP_273786279.1 | phage terminase large subunit family protein | - |
| PS048_RS09270 () | 1928011..1928223 | + | 213 | WP_000198151.1 | gpW family head-tail joining protein | - |
| PS048_RS09275 () | 1928220..1929821 | + | 1602 | WP_273786281.1 | phage portal protein | - |
| PS048_RS09280 () | 1929802..1931121 | + | 1320 | WP_024233963.1 | S49 family peptidase | - |
| PS048_RS09285 () | 1931131..1931463 | + | 333 | WP_001552791.1 | head decoration protein | - |
| PS048_RS09290 () | 1931519..1932544 | + | 1026 | WP_024233962.1 | major capsid protein | - |
| PS048_RS09295 () | 1932586..1932981 | + | 396 | WP_262931997.1 | DNA-packaging protein FI | - |
| PS048_RS09300 () | 1932993..1933346 | + | 354 | WP_000752996.1 | head-tail joining protein | - |
| PS048_RS09305 () | 1933358..1933891 | + | 534 | WP_262932859.1 | phage tail protein | - |
| PS048_RS09310 () | 1933888..1934283 | + | 396 | WP_054413053.1 | phage minor tail U family protein | - |
| PS048_RS09315 () | 1934291..1935031 | + | 741 | WP_059222291.1 | phage tail protein | - |
| PS048_RS09320 () | 1935047..1935469 | + | 423 | WP_032329098.1 | phage minor tail protein G | - |
| PS048_RS09325 () | 1935451..1935876 | + | 426 | WP_059222279.1 | phage tail assembly protein T | - |
| PS048_RS09330 () | 1935869..1938448 | + | 2580 | WP_273786289.1 | phage tail tape measure protein | - |
| PS048_RS09335 () | 1938445..1938774 | + | 330 | WP_000847335.1 | phage tail protein | - |
| PS048_RS09340 () | 1938774..1939472 | + | 699 | WP_024241847.1 | phage minor tail protein L | - |
| PS048_RS09345 () | 1939620..1940639 | + | 1020 | WP_262932869.1 | IS110 family transposase ISEc66 | Transposase |
| PS048_RS09350 () | 1940919..1941662 | + | 744 | WP_273786292.1 | C40 family peptidase | - |
| PS048_RS09355 () | 1941599..1942201 | + | 603 | WP_023149564.1 | tail assembly protein | - |
| PS048_RS09360 () | 1942244..1942765 | - | 522 | WP_025238684.1 | Superoxide dismutase [Cu-Zn] 1 | VF |
| PS048_RS09365 () | 1942899..1946312 | + | 3414 | WP_273786296.1 | host specificity protein J | - |
| PS048_RS09370 () | 1946373..1947686 | + | 1314 | WP_273786297.1 | ISNCY family transposase KIS | Transposase |
| PS048_RS09375 () | 1947688..1947957 | + | 270 | WP_062859942.1 | phage tail fiber C-terminal domain-containing protein | - |
| PS048_RS09380 () | 1948167..1948757 | + | 591 | WP_062859941.1 | hypothetical protein | VF |
| PS048_RS09385 () | 1948808..1951177 | + | 2370 | WP_273786299.1 | hypothetical protein | VF |
| PS048_RS09390 () | 1951404..1952423 | + | 1020 | WP_136503155.1 | hypothetical protein | VF |
| PS048_RS09395 () | 1952770..1953921 | - | 1152 | WP_273786300.1 | Secreted effector protein EspF(U) | VF |
| PS048_RS09400 () | 1954246..1954899 | - | 654 | WP_054411339.1 | hypothetical protein | VF |
| PS048_RS09405 () | 1956031..1956681 | - | 651 | WP_000235605.1 | metal-binding protein ZinT | - |
| PS048_RS09410 () | 1956810..1957445 | - | 636 | WP_273786301.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| PS048_RS09415 () | 1957446..1958450 | - | 1005 | WP_273786302.1 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
| PS048_RS09420 () | 1958559..1958972 | - | 414 | WP_000920114.1 | hydroxyisourate hydrolase | - |
| PS048_RS09425 () | 1959104..1959775 | + | 672 | WP_000698220.1 | response regulator transcription factor HprR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|