MGE detailed information
MGE type: Genomic_island MGE length: 51422 bp
Accession: NZ_CP117643 Location: 4328765..4380186 Organism: Escherichia albertii strain BIA_17 Replicon: chromosome
Accession: NZ_CP117643 Location: 4328765..4380186 Organism: Escherichia albertii strain BIA_17 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS043_RS21715 (4324031) | 4324031..4324816 | + | 786 | WP_161537420.1 | hypothetical protein | - |
| PS043_RS21720 (4325019) | 4325019..4325237 | - | 219 | WP_273816597.1 | AlpA family phage regulatory protein | - |
| PS043_RS21725 (4325355) | 4325355..4325969 | - | 615 | WP_161537419.1 | inovirus Gp2 family protein | - |
| PS043_RS21730 (4326562) | 4326562..4327206 | + | 645 | WP_237579909.1 | hypothetical protein | - |
| PS043_RS21735 (4327266) | 4327266..4327466 | + | 201 | WP_273816598.1 | hypothetical protein | - |
| PS043_RS21740 (4327749) | 4327749..4328567 | + | 819 | WP_161537418.1 | DUF932 domain-containing protein | - |
| PS043_RS21745 (4328597) | 4328597..4329070 | + | 474 | Protein_4258 | DNA repair protein RadC | - |
| PS043_RS21750 (4329070) | 4329070..4329405 | + | 336 | WP_000939437.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| PS043_RS21755 (4329436) | 4329436..4329777 | + | 342 | WP_161537416.1 | TA system toxin CbtA family protein | Toxin Detail |
| PS043_RS21760 (4329892) | 4329892..4330725 | + | 834 | WP_161537415.1 | DUF4942 domain-containing protein | - |
| PS043_RS21765 (4330802) | 4330802..4331050 | + | 249 | WP_024187601.1 | ribbon-helix-helix domain-containing protein | - |
| PS043_RS21770 (4331054) | 4331054..4331329 | + | 276 | WP_161537414.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PS043_RS21775 (4331448) | 4331448..4332239 | + | 792 | WP_161537413.1 | hypothetical protein | VF |
| PS043_RS21780 (4332511) | 4332511..4333494 | + | 984 | WP_161537412.1 | restriction endonuclease | - |
| PS043_RS21785 (4334255) | 4334255..4334938 | + | 684 | WP_273816599.1 | hypothetical protein | - |
| PS043_RS21790 (4335331) | 4335331..4336113 | - | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| PS043_RS21795 (4336277) | 4336277..4336702 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| PS043_RS21800 (4336699) | 4336699..4337049 | + | 351 | WP_000624718.1 | IS66 family transposase ISEc47 | Transposase |
| PS043_RS21805 (4337080) | 4337080..4338669 | + | 1590 | Protein_4270 | IS66 family transposase ISEc23 | Transposase |
| PS043_RS21810 (4338656) | 4338656..4339648 | - | 993 | WP_273816600.1 | IS21 family transposase IS100kyp | Transposase |
| PS043_RS21815 (4339974) | 4339974..4340252 | - | 279 | WP_032279169.1 | hypothetical protein | - |
| PS043_RS21820 (4340310) | 4340310..4341674 | - | 1365 | WP_273816601.1 | hypothetical protein | VF |
| PS043_RS21825 (4341966) | 4341966..4342604 | - | 639 | WP_001145629.1 | hypothetical protein | VF |
| PS043_RS21830 (4342802) | 4342802..4343386 | + | 585 | WP_001111206.1 | hypothetical protein | VF |
| PS043_RS21835 (4343701) | 4343701..4343874 | - | 174 | WP_001298737.1 | Secreted effector protein EspF(U) | VF |
| PS043_RS21840 (4343851) | 4343851..4344606 | - | 756 | Protein_4277 | Secreted effector protein EspF(U) | VF |
| PS043_RS21845 (4344822) | 4344822..4345100 | - | 279 | WP_000245867.1 | hypothetical protein | VF |
| PS043_RS21850 (4345106) | 4345106..4345327 | - | 222 | WP_001053840.1 | hypothetical protein | VF |
| PS043_RS21855 (4345364) | 4345364..4345771 | - | 408 | WP_000228587.1 | hypothetical protein | VF |
| PS043_RS21860 (4345778) | 4345778..4346722 | - | 945 | WP_001092012.1 | Protein EaeB | VF |
| PS043_RS21865 (4346743) | 4346743..4347885 | - | 1143 | WP_273816602.1 | hypothetical protein | VF |
| PS043_RS21870 (4347898) | 4347898..4348476 | - | 579 | WP_059224490.1 | hypothetical protein | VF |
| PS043_RS21875 (4348534) | 4348534..4349589 | - | 1056 | WP_001273459.1 | hypothetical protein | VF |
| PS043_RS21880 (4349732) | 4349732..4350952 | + | 1221 | WP_059224492.1 | hypothetical protein | VF |
| PS043_RS21885 (4351331) | 4351331..4354177 | - | 2847 | WP_033803159.1 | Intimin | VF |
| PS043_RS21890 (4354238) | 4354238..4354708 | - | 471 | WP_000098786.1 | Tir chaperone | VF |
| PS043_RS21895 (4354841) | 4354841..4356457 | - | 1617 | WP_131109232.1 | Translocated intimin receptor Tir | VF |
| PS043_RS21900 (4356907) | 4356907..4357518 | - | 612 | WP_273816605.1 | hypothetical protein | VF |
| PS043_RS21905 (4357769) | 4357769..4358128 | + | 360 | WP_131109230.1 | hypothetical protein | VF |
| PS043_RS21910 (4358344) | 4358344..4358859 | - | 516 | WP_001360071.1 | hypothetical protein | VF |
| PS043_RS21915 (4358890) | 4358890..4359807 | - | 918 | WP_033803155.1 | hypothetical protein | VF |
| PS043_RS21920 (4359770) | 4359770..4360186 | - | 417 | WP_001443671.1 | hypothetical protein | VF |
| PS043_RS21925 (4360179) | 4360179..4360499 | - | 321 | WP_001062953.1 | hypothetical protein | VF |
| PS043_RS21930 (4360559) | 4360559..4361899 | - | 1341 | WP_033803154.1 | putative ATP synthase YscN | VF |
| PS043_RS21935 (4361883) | 4361883..4363910 | - | 2028 | WP_033803153.1 | Secretion system apparatus protein SsaV | VF |
| PS043_RS21940 (4363907) | 4363907..4364260 | - | 354 | WP_001050414.1 | hypothetical protein | VF |
| PS043_RS21945 (4364444) | 4364444..4364746 | + | 303 | WP_273817090.1 | hypothetical protein | VF |
| PS043_RS21950 (4364830) | 4364830..4365207 | + | 378 | WP_001059792.1 | hypothetical protein | VF |
| PS043_RS21955 (4365210) | 4365210..4365782 | + | 573 | WP_033803151.1 | Yop proteins translocation lipoprotein J | VF |
| PS043_RS21960 (4365788) | 4365788..4366243 | + | 456 | WP_001063688.1 | hypothetical protein | VF |
| PS043_RS21965 (4366243) | 4366243..4367781 | + | 1539 | WP_000723928.1 | Type 3 secretion system secretin | VF |
| PS043_RS21970 (4367795) | 4367795..4368250 | + | 456 | WP_273816607.1 | hypothetical protein | VF |
| PS043_RS21975 (4368637) | 4368637..4369050 | - | 414 | WP_273816608.1 | type III secretion system LEE transcriptional regulator GrlA | - |
| PS043_RS21980 (4369126) | 4369126..4369482 | - | 357 | WP_000605357.1 | negative regulator GrlR | - |
| PS043_RS21985 (4369679) | 4369679..4370137 | + | 459 | WP_273817092.1 | hypothetical protein | VF |
| PS043_RS21990 (4370134) | 4370134..4371171 | - | 1038 | WP_001291686.1 | Yop proteins translocation protein U | VF |
| PS043_RS21995 (4371164) | 4371164..4371940 | - | 777 | WP_001002808.1 | hypothetical protein | VF |
| PS043_RS22000 (4371940) | 4371940..4372209 | - | 270 | WP_000447503.1 | hypothetical protein | VF |
| PS043_RS22005 (4372209) | 4372209..4372862 | - | 654 | WP_001299990.1 | Surface presentation of antigens protein SpaP | VF |
| PS043_RS22010 (4372867) | 4372867..4373520 | - | 654 | WP_000780744.1 | hypothetical protein | VF |
| PS043_RS22015 (4373507) | 4373507..4374106 | - | 600 | WP_000154002.1 | hypothetical protein | VF |
| PS043_RS22020 (4374103) | 4374103..4374417 | - | 315 | WP_000084152.1 | hypothetical protein | VF |
| PS043_RS22025 (4374430) | 4374430..4374648 | - | 219 | WP_000628726.1 | hypothetical protein | VF |
| PS043_RS22030 (4374663) | 4374663..4375034 | - | 372 | WP_059220633.1 | type III secretion system LEE master regulator Ler | - |
| PS043_RS22035 (4376241) | 4376241..4377386 | + | 1146 | WP_123059807.1 | hypothetical protein | VF |
| PS043_RS22040 (4377533) | 4377533..4378351 | + | 819 | WP_054411720.1 | SdiA-regulated domain-containing protein | - |
| PS043_RS22045 (4378557) | 4378557..4379432 | + | 876 | WP_161538006.1 | hypothetical protein | VF |
| PS043_RS22050 (4379672) | 4379672..4379944 | - | 273 | WP_000402405.1 | GNAT family N-acetyltransferase | - |
| PS043_RS22055 (4379956) | 4379956..4380186 | - | 231 | WP_161538007.1 | 4Fe-4S mono-cluster protein YjdI | - |
| PS043_RS22060 (4380354) | 4380354..4381985 | + | 1632 | WP_107192611.1 | sensor histidine kinase | - |
| PS043_RS22065 (4381982) | 4381982..4382701 | + | 720 | WP_000611295.1 | two-component system response regulator DcuR | - |
| PS043_RS22070 (4383272) | 4383272..4384612 | + | 1341 | WP_000899519.1 | anaerobic C4-dicarboxylate transporter DcuB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|