MGE detailed information
MGE type: Conjugative plasmid MGE length: 144030 bp
Accession: NZ_CP117638 Location: 1..144030 Organism: Escherichia albertii strain BIA_18 Replicon: plasmid pEA18_1
Accession: NZ_CP117638 Location: 1..144030 Organism: Escherichia albertii strain BIA_18 Replicon: plasmid pEA18_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS040_RS23960 (1) | 1..1023 | + | 1023 | WP_256878410.1 | plasmid replication initiator RepA | - |
| PS040_RS23965 (2246) | 2246..2656 | - | 411 | WP_256878411.1 | subtilase family AB5 toxin binding subunit | - |
| PS040_RS23970 (2766) | 2766..3491 | - | 726 | WP_256878412.1 | enterotoxin A family protein | - |
| PS040_RS23975 (3813) | 3813..4941 | + | 1129 | Protein_3 | IS3 family transposase ISEc17 | Transposase |
| PS040_RS23980 (5414) | 5414..5632 | + | 219 | WP_000813639.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| PS040_RS23985 (5634) | 5634..5939 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| PS040_RS23990 (5940) | 5940..6748 | + | 809 | Protein_6 | site-specific integrase | - |
| PS040_RS23995 (6928) | 6928..7572 | + | 645 | WP_001144036.1 | ParA family protein | - |
| PS040_RS24000 (7659) | 7659..7967 | + | 309 | WP_000030204.1 | molecular chaperone GroEL | - |
| PS040_RS24005 (8379) | 8379..9359 | + | 981 | WP_256878413.1 | plasmid segregation protein ParM | - |
| PS040_RS24010 (9352) | 9352..9768 | + | 417 | WP_273775112.1 | plasmid partitioning/stability family protein | - |
| PS040_RS24015 (9770) | 9770..9979 | - | 210 | Protein_11 | DUF4113 domain-containing protein | - |
| PS040_RS24020 (10224) | 10224..11759 | + | 1536 | WP_256878094.1 | IS21 family transposase ISSso4 | Transposase |
| PS040_RS24025 (11776) | 11776..12531 | + | 756 | WP_001282649.1 | IS21 family transposase ISSso4 | Transposase |
| PS040_RS24030 (12719) | 12719..12925 | + | 207 | Protein_14 | IS3 family transposase IS2 | Transposase |
| PS040_RS24035 (12955) | 12955..14083 | - | 1129 | Protein_15 | IS3 family transposase ISEc17 | Transposase |
| PS040_RS24040 (14313) | 14313..14486 | + | 174 | Protein_16 | transposase family protein | - |
| PS040_RS24045 (14447) | 14447..15414 | - | 968 | Protein_17 | integrase core domain-containing protein | - |
| PS040_RS24050 (16245) | 16245..17222 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| PS040_RS24055 (17501) | 17501..18241 | - | 741 | WP_158136703.1 | tyrosine-type recombinase/integrase | - |
| PS040_RS24060 (18362) | 18362..18484 | - | 123 | Protein_20 | hypothetical protein | - |
| PS040_RS24065 (18522) | 18522..18676 | + | 155 | Protein_21 | IS110 family transposase | - |
| PS040_RS24070 (18682) | 18682..18861 | - | 180 | Protein_22 | IS3 family transposase ISKpn38 | Transposase |
| PS040_RS24075 (18974) | 18974..19662 | - | 689 | Protein_23 | enterotoxin | - |
| PS040_RS24080 (19868) | 19868..28582 | - | 8715 | WP_273784066.1 | TcdA/TcdB catalytic glycosyltransferase domain-containing protein | - |
| PS040_RS24085 (28971) | 28971..29136 | - | 166 | Protein_25 | IS3 family transposase | - |
| PS040_RS24090 (29321) | 29321..29923 | + | 603 | Protein_26 | IS3 family transposase IS911 | Transposase |
| PS040_RS24095 (30001) | 30001..30159 | + | 159 | Protein_27 | IS66 family transposase IS682 | Transposase |
| PS040_RS24100 (30289) | 30289..30825 | + | 537 | Protein_28 | iron/manganese ABC transporter permease subunit SitD | - |
| PS040_RS24105 (30813) | 30813..31504 | + | 692 | Protein_29 | IS66 family transposase ISCro1 | Transposase |
| PS040_RS24110 (31682) | 31682..32875 | - | 1194 | WP_256878418.1 | MFS transporter | - |
| PS040_RS24115 (33011) | 33011..34735 | + | 1725 | WP_256878442.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| PS040_RS24120 (34736) | 34736..35683 | + | 948 | WP_256878419.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| PS040_RS24125 (35683) | 35683..37425 | + | 1743 | WP_256878420.1 | Aerobactin synthase | VF |
| PS040_RS24130 (37422) | 37422..38747 | + | 1326 | WP_256878421.1 | L-lysine N6-monooxygenase | VF |
| PS040_RS24135 (38753) | 38753..40948 | + | 2196 | WP_256878443.1 | Ferric aerobactin receptor | VF |
| PS040_RS24140 (41367) | 41367..42762 | + | 1396 | Protein_36 | IS3 family transposase ISKpn38 | Transposase |
| PS040_RS24145 (42835) | 42835..43410 | - | 576 | WP_256878422.1 | hypothetical protein | - |
| PS040_RS24150 (43398) | 43398..43667 | - | 270 | WP_097411212.1 | hypothetical protein | - |
| PS040_RS24155 (43867) | 43867..45093 | + | 1227 | Protein_39 | IS3 family transposase IS2 | Transposase |
| PS040_RS24160 (45104) | 45104..45928 | - | 825 | Protein_40 | translesion error-prone DNA polymerase V subunit UmuC | - |
| PS040_RS24165 (45991) | 45991..46989 | + | 999 | WP_032325769.1 | IS91 family transposase ISMno24 | Transposase |
| PS040_RS24170 (46986) | 46986..49196 | + | 2211 | WP_273784067.1 | tyrosine-type recombinase/integrase | - |
| PS040_RS24175 (49243) | 49243..49761 | - | 519 | WP_000993248.1 | hypothetical protein | - |
| PS040_RS24180 (49774) | 49774..50628 | - | 855 | WP_256878423.1 | WYL domain-containing protein | - |
| PS040_RS24185 (50764) | 50764..51945 | + | 1182 | WP_032325773.1 | hypothetical protein | - |
| PS040_RS24190 (51942) | 51942..54170 | + | 2229 | WP_089557487.1 | ThiF family adenylyltransferase | - |
| PS040_RS24195 (54215) | 54215..54343 | - | 129 | Protein_47 | protein ImpB | - |
| PS040_RS24200 (54343) | 54343..54729 | - | 387 | WP_256878425.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PS040_RS24205 (54777) | 54777..55025 | - | 249 | WP_032084478.1 | DinI-like family protein | - |
| PS040_RS24210 (55433) | 55433..56335 | + | 903 | WP_273784072.1 | DUF1281 domain-containing protein | - |
| PS040_RS24215 (56332) | 56332..56574 | + | 243 | WP_001503439.1 | hypothetical protein | - |
| PS040_RS24220 (56672) | 56672..57688 | + | 1017 | WP_000219394.1 | IS110 family transposase ISShdy1 | Transposase |
| PS040_RS24225 (58235) | 58235..58309 | + | 75 | Protein_53 | hypothetical protein | - |
| PS040_RS24230 (58385) | 58385..58456 | + | 72 | Protein_54 | adenine-specific DNA-methyltransferase | - |
| PS040_RS24235 (58538) | 58538..60236 | - | 1699 | Protein_55 | group II intron reverse transcriptase/maturase | - |
| PS040_RS24240 (60858) | 60858..61469 | + | 612 | Protein_56 | DNA methylase | - |
| PS040_RS24245 (61470) | 61470..61691 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| PS040_RS24250 (61621) | 61621..62139 | + | 519 | WP_273784073.1 | DUF1380 family protein | - |
| PS040_RS24255 (62184) | 62184..62954 | + | 771 | WP_273784068.1 | hypothetical protein | - |
| PS040_RS24260 (63367) | 63367..63792 | + | 426 | WP_273784069.1 | antirestriction protein | - |
| PS040_RS24265 (63839) | 63839..64261 | + | 423 | WP_273784070.1 | hypothetical protein | - |
| PS040_RS24270 (64258) | 64258..64449 | + | 192 | WP_023278050.1 | hypothetical protein | - |
| PS040_RS24275 (65426) | 65426..65656 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| PS040_RS24280 (65708) | 65708..67069 | + | 1362 | WP_089697241.1 | DUF3560 domain-containing protein | - |
| PS040_RS24285 (67116) | 67116..67679 | + | 564 | WP_273784071.1 | class I SAM-dependent methyltransferase | - |
| PS040_RS24290 (67765) | 67765..68208 | - | 444 | Protein_66 | hypothetical protein | - |
| PS040_RS24295 (68278) | 68278..68538 | + | 261 | WP_244463895.1 | single-stranded DNA-binding protein | - |
| PS040_RS24300 (68631) | 68631..69623 | - | 993 | WP_273784074.1 | IS110 family transposase IS1663 | Transposase |
| PS040_RS24305 (69714) | 69714..70133 | + | 420 | Protein_69 | single-stranded DNA-binding protein | - |
| PS040_RS24310 (70190) | 70190..70423 | + | 234 | WP_000006009.1 | DUF905 family protein | - |
| PS040_RS24315 (70489) | 70489..72445 | + | 1957 | Protein_71 | ParB/RepB/Spo0J family partition protein | - |
| PS040_RS24320 (72514) | 72514..72948 | + | 435 | WP_273784012.1 | conjugation system SOS inhibitor PsiB | - |
| PS040_RS24325 (72945) | 72945..73664 | + | 720 | WP_273784014.1 | plasmid SOS inhibition protein A | - |
| PS040_RS24330 (73661) | 73661..73975 | + | 315 | WP_273784016.1 | theronine dehydrogenase | - |
| - (73924) | 73924..74136 | + | 213 | NuclAT_0 | - | - |
| - (73924) | 73924..74136 | + | 213 | NuclAT_0 | - | - |
| - (73924) | 73924..74136 | + | 213 | NuclAT_0 | - | - |
| - (73924) | 73924..74136 | + | 213 | NuclAT_0 | - | - |
| PS040_RS24335 (74124) | 74124..74276 | + | 153 | Protein_75 | DUF5431 family protein | - |
| PS040_RS24340 (74221) | 74221..74343 | + | 123 | WP_223170659.1 | type I toxin-antitoxin system Hok family toxin | - |
| PS040_RS24345 (74742) | 74742..76096 | - | 1355 | Protein_77 | group II intron reverse transcriptase/maturase | - |
| PS040_RS24350 (76825) | 76825..76998 | - | 174 | Protein_78 | hypothetical protein | - |
| PS040_RS24355 (77068) | 77068..77226 | + | 159 | WP_273784018.1 | hypothetical protein | - |
| PS040_RS24360 (77223) | 77223..77510 | + | 288 | Protein_80 | hypothetical protein | - |
| PS040_RS24365 (77629) | 77629..78449 | + | 821 | Protein_81 | DUF932 domain-containing protein | - |
| PS040_RS24370 (78745) | 78745..79347 | - | 603 | WP_273784019.1 | hypothetical protein | VF |
| PS040_RS24375 (79667) | 79667..80050 | + | 384 | WP_046788507.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| PS040_RS24380 (80237) | 80237..80926 | + | 690 | WP_273784024.1 | conjugal transfer transcriptional regulator TraJ | - |
| PS040_RS24385 (81019) | 81019..81420 | + | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| PS040_RS24390 (81453) | 81453..81812 | + | 360 | WP_000994781.1 | type IV conjugative transfer system pilin TraA | - |
| PS040_RS24395 (81827) | 81827..82138 | + | 312 | WP_071940841.1 | type IV conjugative transfer system protein TraL | - |
| PS040_RS24400 (82160) | 82160..82726 | + | 567 | WP_001378930.1 | type IV conjugative transfer system protein TraE | - |
| PS040_RS24405 (82713) | 82713..83441 | + | 729 | WP_273784029.1 | type-F conjugative transfer system secretin TraK | - |
| PS040_RS24410 (83441) | 83441..84892 | + | 1452 | WP_273784031.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| PS040_RS24415 (84882) | 84882..85442 | + | 561 | WP_273784033.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| PS040_RS24420 (85429) | 85429..85749 | + | 321 | WP_001057293.1 | conjugal transfer protein TrbD | - |
| PS040_RS24425 (85742) | 85742..85993 | + | 252 | WP_001038344.1 | conjugal transfer protein TrbG | - |
| PS040_RS24430 (85990) | 85990..86505 | + | 516 | WP_273784037.1 | type IV conjugative transfer system lipoprotein TraV | - |
| PS040_RS24435 (86640) | 86640..86861 | + | 222 | WP_001278700.1 | conjugal transfer protein TraR | - |
| PS040_RS24440 (86854) | 86854..87327 | + | 474 | WP_273784041.1 | hypothetical protein | - |
| PS040_RS24445 (87407) | 87407..87622 | + | 216 | WP_024217748.1 | hypothetical protein | - |
| PS040_RS24450 (87650) | 87650..88012 | + | 363 | WP_273784075.1 | hypothetical protein | - |
| PS040_RS24455 (88138) | 88138..90189 | + | 2052 | Protein_99 | type IV secretion system protein TraC | - |
| PS040_RS24460 (90220) | 90220..91812 | - | 1593 | WP_048237919.1 | IS66 family transposase ISEc23 | Transposase |
| PS040_RS24465 (91843) | 91843..92193 | - | 351 | WP_000624718.1 | IS66 family transposase ISEc47 | Transposase |
| PS040_RS24470 (92190) | 92190..92615 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| PS040_RS24475 (92955) | 92955..93533 | - | 579 | WP_256878398.1 | hypothetical protein | VF |
| PS040_RS24480 (93867) | 93867..94049 | + | 183 | WP_256878447.1 | IS3 family transposase ISEc17 | Transposase |
| PS040_RS24485 (94008) | 94008..94565 | - | 558 | Protein_105 | Putative type II secretion system L-type protein YghE | VF |
| PS040_RS24490 (94712) | 94712..95275 | - | 564 | WP_256878397.1 | Type II secretion system protein H | VF |
| PS040_RS24495 (95279) | 95279..95698 | - | 420 | WP_273784050.1 | Type II secretion system protein G | VF |
| PS040_RS24500 (95715) | 95715..95865 | - | 151 | Protein_108 | hypothetical protein | VF |
| PS040_RS24505 (96007) | 96007..96120 | - | 114 | Protein_109 | hypothetical protein | VF |
| PS040_RS24510 (96255) | 96255..96815 | - | 561 | WP_273784053.1 | fertility inhibition protein FinO | - |
| PS040_RS24515 (96869) | 96869..97615 | - | 747 | WP_273784055.1 | conjugal transfer pilus acetylase TraX | - |
| PS040_RS24520 (97635) | 97635..102905 | - | 5271 | Protein_112 | conjugative transfer relaxase/helicase TraI | - |
| PS040_RS24525 (102905) | 102905..105076 | - | 2172 | WP_273784057.1 | type IV conjugative transfer system coupling protein TraD | - |
| PS040_RS24530 (105328) | 105328..106059 | - | 732 | WP_273784059.1 | conjugal transfer complement resistance protein TraT | - |
| PS040_RS24535 (106073) | 106073..106483 | - | 411 | WP_244493347.1 | conjugal transfer entry exclusion protein TraS | - |
| PS040_RS24540 (106589) | 106589..109414 | - | 2826 | WP_089606830.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| PS040_RS24545 (109411) | 109411..110784 | - | 1374 | WP_273784063.1 | conjugal transfer pilus assembly protein TraH | - |
| PS040_RS24550 (110771) | 110771..111163 | - | 393 | WP_000662237.1 | F-type conjugal transfer protein TrbF | - |
| PS040_RS24555 (111150) | 111150..111491 | - | 342 | WP_071528036.1 | P-type conjugative transfer protein TrbJ | - |
| PS040_RS24560 (111421) | 111421..111966 | - | 546 | WP_054191927.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| PS040_RS24565 (111953) | 111953..112189 | - | 237 | WP_273784076.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| PS040_RS24570 (112350) | 112350..113093 | - | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| PS040_RS24575 (113086) | 113086..113343 | - | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| PS040_RS24580 (113370) | 113370..115232 | - | 1863 | WP_273784064.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| PS040_RS24585 (115468) | 115468..115848 | - | 381 | WP_187181029.1 | hypothetical protein | - |
| PS040_RS24590 (115845) | 115845..116483 | - | 639 | WP_273784077.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| PS040_RS24595 (116492) | 116492..117484 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| PS040_RS24600 (117481) | 117481..118113 | - | 633 | WP_273784065.1 | type-F conjugative transfer system protein TraW | - |
| PS040_RS24605 (118110) | 118110..118496 | - | 387 | WP_000214096.1 | type-F conjugative transfer system protein TrbI | - |
| PS040_RS24610 (118493) | 118493..119080 | - | 588 | Protein_130 | hypothetical protein | - |
| PS040_RS24615 (119165) | 119165..119590 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| PS040_RS24620 (119587) | 119587..119937 | + | 351 | WP_000624718.1 | IS66 family transposase ISEc47 | Transposase |
| PS040_RS24625 (119968) | 119968..121560 | + | 1593 | WP_048237919.1 | IS66 family transposase ISEc23 | Transposase |
| PS040_RS24630 (121583) | 121583..122381 | - | 799 | Protein_134 | IS110 family transposase ISPlu13 | Transposase |
| PS040_RS24635 (122430) | 122430..123386 | + | 957 | Protein_135 | IS3 family transposase | - |
| PS040_RS24640 (123786) | 123786..127904 | + | 4119 | WP_256878399.1 | Hemoglobin-binding protease hbp autotransporter | VF |
| PS040_RS24645 (128089) | 128089..128473 | + | 385 | Protein_137 | transposase | - |
| PS040_RS24650 (128602) | 128602..130171 | - | 1570 | Protein_138 | IS66 family transposase | - |
| PS040_RS24655 (130191) | 130191..130538 | - | 348 | WP_064160280.1 | IS66 family transposase ISCro1 | Transposase |
| PS040_RS24660 (130538) | 130538..131188 | - | 651 | Protein_140 | IS66 family transposase IS679 | Transposase |
| PS040_RS24665 (131270) | 131270..131677 | - | 408 | WP_256878400.1 | hypothetical protein | - |
| PS040_RS24670 (131905) | 131905..132141 | - | 237 | WP_256878401.1 | hypothetical protein | - |
| PS040_RS24675 (132166) | 132166..133062 | - | 897 | WP_256878402.1 | UvrD-helicase domain-containing protein | - |
| PS040_RS24680 (133152) | 133152..134456 | + | 1305 | Protein_144 | ISL3 family transposase | - |
| PS040_RS24685 (134609) | 134609..134908 | + | 300 | WP_256878403.1 | IS66 family transposase IS682 | Transposase |
| PS040_RS24690 (134959) | 134959..135999 | - | 1041 | WP_256878404.1 | IS481 family transposase ISErsp1 | Transposase |
| PS040_RS24695 (136094) | 136094..136309 | - | 216 | WP_256878405.1 | hypothetical protein | - |
| PS040_RS24700 (136592) | 136592..137054 | - | 463 | Protein_148 | integrase core domain-containing protein | - |
| PS040_RS24705 (137261) | 137261..137467 | + | 207 | Protein_149 | IS1 family transposase | - |
| PS040_RS24710 (137501) | 137501..139618 | - | 2118 | WP_256878406.1 | peptidase domain-containing ABC transporter | - |
| PS040_RS24715 (139618) | 139618..140838 | - | 1221 | WP_273775025.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| PS040_RS24720 (141438) | 141438..142010 | - | 573 | WP_256878408.1 | hypothetical protein | - |
| PS040_RS24725 (142185) | 142185..142840 | - | 656 | Protein_153 | IS1 family transposase IS1N | Transposase |
| PS040_RS24730 (142839) | 142839..143123 | - | 285 | Protein_154 | IS4 family transposase ISEc60 | Transposase |
| PS040_RS24735 (143474) | 143474..143731 | + | 258 | WP_256878409.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|