MGE detailed information
MGE type: Genomic_island MGE length: 49082 bp
Accession: NZ_CP117637 Location: 4363926..4413007 Organism: Escherichia albertii strain BIA_18 Replicon: chromosome
Accession: NZ_CP117637 Location: 4363926..4413007 Organism: Escherichia albertii strain BIA_18 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS040_RS21525 (4359264) | 4359264..4359839 | + | 576 | WP_010339918.1 | transcriptional regulator | - |
| PS040_RS21535 (4360185) | 4360185..4361444 | + | 1260 | Protein_4210 | integrase arm-type DNA-binding domain-containing protein | - |
| PS040_RS21540 (4361477) | 4361477..4361614 | - | 138 | WP_157999942.1 | hypothetical protein | - |
| PS040_RS21545 (4361635) | 4361635..4362516 | - | 882 | WP_273782480.1 | integrase domain-containing protein | - |
| PS040_RS21550 (4363466) | 4363466..4363687 | - | 222 | WP_024165420.1 | helix-turn-helix transcriptional regulator | - |
| PS040_RS21555 (4363690) | 4363690..4364162 | - | 473 | Protein_4214 | hypothetical protein | - |
| PS040_RS21560 (4364650) | 4364650..4365375 | + | 726 | WP_273782481.1 | hypothetical protein | - |
| PS040_RS21565 (4365300) | 4365300..4365851 | + | 552 | WP_273782482.1 | hypothetical protein | - |
| PS040_RS21570 (4365854) | 4365854..4366342 | + | 489 | WP_273782483.1 | DUF6521 family protein | - |
| PS040_RS21575 (4366339) | 4366339..4366878 | + | 540 | WP_273782484.1 | hypothetical protein | - |
| PS040_RS21580 (4366894) | 4366894..4368330 | + | 1437 | WP_273782485.1 | DUF3732 domain-containing protein | - |
| PS040_RS21585 (4368411) | 4368411..4369211 | - | 801 | WP_000356512.1 | hypothetical protein | - |
| PS040_RS21590 (4369252) | 4369252..4370121 | - | 870 | WP_000547574.1 | hypothetical protein | - |
| PS040_RS21595 (4370270) | 4370270..4371052 | + | 783 | WP_024165421.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| PS040_RS21600 (4371039) | 4371039..4371968 | + | 930 | WP_273782486.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| PS040_RS21605 (4373136) | 4373136..4373414 | - | 279 | WP_032279169.1 | hypothetical protein | VF |
| PS040_RS21610 (4373472) | 4373472..4374836 | - | 1365 | WP_273782487.1 | hypothetical protein | VF |
| PS040_RS21615 (4375128) | 4375128..4375766 | - | 639 | WP_059258007.1 | hypothetical protein | VF |
| PS040_RS21620 (4375964) | 4375964..4376548 | + | 585 | WP_273782488.1 | hypothetical protein | VF |
| PS040_RS21625 (4376862) | 4376862..4377626 | - | 765 | WP_273782489.1 | Secreted effector protein EspF(U) | VF |
| PS040_RS21630 (4377842) | 4377842..4378120 | - | 279 | WP_000245867.1 | hypothetical protein | VF |
| PS040_RS21635 (4378126) | 4378126..4378347 | - | 222 | WP_001053840.1 | hypothetical protein | VF |
| PS040_RS21640 (4378384) | 4378384..4378791 | - | 408 | WP_273782490.1 | hypothetical protein | VF |
| PS040_RS21645 (4378798) | 4378798..4379742 | - | 945 | WP_001092012.1 | Protein EaeB | VF |
| PS040_RS21650 (4379763) | 4379763..4380905 | - | 1143 | WP_000935770.1 | hypothetical protein | VF |
| PS040_RS21655 (4380918) | 4380918..4381496 | - | 579 | WP_273782491.1 | hypothetical protein | VF |
| PS040_RS21660 (4381554) | 4381554..4382609 | - | 1056 | WP_024228462.1 | hypothetical protein | VF |
| PS040_RS21665 (4382752) | 4382752..4383972 | + | 1221 | WP_059236113.1 | hypothetical protein | VF |
| PS040_RS21670 (4384174) | 4384174..4386993 | - | 2820 | WP_263305403.1 | Intimin | VF |
| PS040_RS21675 (4387054) | 4387054..4387524 | - | 471 | WP_000098786.1 | Tir chaperone | VF |
| PS040_RS21680 (4387657) | 4387657..4389273 | - | 1617 | WP_273782492.1 | Translocated intimin receptor Tir | VF |
| PS040_RS21685 (4389722) | 4389722..4390333 | - | 612 | WP_273782493.1 | hypothetical protein | VF |
| PS040_RS21690 (4390584) | 4390584..4390943 | + | 360 | WP_273782494.1 | hypothetical protein | VF |
| PS040_RS21695 (4391162) | 4391162..4391677 | - | 516 | WP_001374266.1 | hypothetical protein | VF |
| PS040_RS21700 (4391708) | 4391708..4392625 | - | 918 | WP_149450482.1 | hypothetical protein | VF |
| PS040_RS21705 (4392588) | 4392588..4393004 | - | 417 | WP_001443671.1 | hypothetical protein | VF |
| PS040_RS21710 (4392997) | 4392997..4393317 | - | 321 | WP_001062953.1 | hypothetical protein | VF |
| PS040_RS21715 (4393377) | 4393377..4394717 | - | 1341 | WP_033803154.1 | putative ATP synthase YscN | VF |
| PS040_RS21720 (4394701) | 4394701..4396728 | - | 2028 | WP_059273689.1 | Secretion system apparatus protein SsaV | VF |
| PS040_RS21725 (4396725) | 4396725..4397078 | - | 354 | WP_001050414.1 | hypothetical protein | VF |
| PS040_RS21730 (4397262) | 4397262..4397564 | + | 303 | WP_000338350.1 | hypothetical protein | VF |
| PS040_RS21735 (4397648) | 4397648..4398025 | + | 378 | WP_001059795.1 | hypothetical protein | VF |
| PS040_RS21740 (4398028) | 4398028..4398600 | + | 573 | WP_000759951.1 | Yop proteins translocation lipoprotein J | VF |
| PS040_RS21745 (4398606) | 4398606..4399061 | + | 456 | WP_054411713.1 | hypothetical protein | VF |
| PS040_RS21750 (4399061) | 4399061..4400599 | + | 1539 | WP_273782495.1 | Type 3 secretion system secretin | VF |
| PS040_RS21755 (4400613) | 4400613..4401068 | + | 456 | WP_000087469.1 | hypothetical protein | VF |
| PS040_RS21760 (4401456) | 4401456..4401869 | - | 414 | WP_256878760.1 | type III secretion system LEE transcriptional regulator GrlA | - |
| PS040_RS21765 (4401945) | 4401945..4402301 | - | 357 | WP_000605357.1 | negative regulator GrlR | - |
| PS040_RS21770 (4402498) | 4402498..4402956 | + | 459 | WP_033803165.1 | hypothetical protein | VF |
| PS040_RS21775 (4402953) | 4402953..4403990 | - | 1038 | WP_054411716.1 | Yop proteins translocation protein U | VF |
| PS040_RS21780 (4403983) | 4403983..4404759 | - | 777 | WP_001002808.1 | hypothetical protein | VF |
| PS040_RS21785 (4404759) | 4404759..4405028 | - | 270 | WP_000447503.1 | hypothetical protein | VF |
| PS040_RS21790 (4405028) | 4405028..4405681 | - | 654 | WP_001299990.1 | Surface presentation of antigens protein SpaP | VF |
| PS040_RS21795 (4405686) | 4405686..4406339 | - | 654 | WP_000780744.1 | hypothetical protein | VF |
| PS040_RS21800 (4406326) | 4406326..4406925 | - | 600 | WP_000154002.1 | hypothetical protein | VF |
| PS040_RS21805 (4406922) | 4406922..4407236 | - | 315 | WP_273782496.1 | hypothetical protein | VF |
| PS040_RS21810 (4407249) | 4407249..4407467 | - | 219 | WP_000628726.1 | hypothetical protein | VF |
| PS040_RS21815 (4407482) | 4407482..4407853 | - | 372 | WP_273782497.1 | type III secretion system LEE master regulator Ler | - |
| PS040_RS21820 (4409062) | 4409062..4410207 | + | 1146 | WP_000606969.1 | hypothetical protein | VF |
| PS040_RS21825 (4410354) | 4410354..4411172 | + | 819 | WP_273782498.1 | SdiA-regulated domain-containing protein | - |
| PS040_RS21830 (4411378) | 4411378..4412253 | + | 876 | WP_273782499.1 | hypothetical protein | VF |
| PS040_RS21835 (4412493) | 4412493..4412765 | - | 273 | WP_044711008.1 | GNAT family N-acetyltransferase | - |
| PS040_RS21840 (4412777) | 4412777..4413007 | - | 231 | WP_273782500.1 | 4Fe-4S mono-cluster protein YjdI | - |
| PS040_RS21845 (4413175) | 4413175..4414806 | + | 1632 | WP_273782501.1 | sensor histidine kinase | - |
| PS040_RS21850 (4414803) | 4414803..4415522 | + | 720 | WP_000611293.1 | two-component system response regulator DcuR | - |
| PS040_RS21855 (4416093) | 4416093..4417433 | + | 1341 | WP_059215478.1 | anaerobic C4-dicarboxylate transporter DcuB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|