MGE detailed information
MGE type: Prophage MGE length: 97455 bp
Accession: NZ_CP117637 Location: 2121643..2219097 Organism: Escherichia albertii strain BIA_18 Replicon: chromosome
Accession: NZ_CP117637 Location: 2121643..2219097 Organism: Escherichia albertii strain BIA_18 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS040_RS10455 () | 2118691..2119662 | - | 972 | WP_000564757.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| PS040_RS10460 () | 2119659..2120402 | - | 744 | WP_000019620.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| PS040_RS10465 () | 2120443..2120838 | - | 396 | WP_002462319.1 | MAPEG family protein | - |
| PS040_RS10470 () | 2120891..2121661 | - | 771 | WP_059276194.1 | DUF72 domain-containing protein | - |
| PS040_RS10475 () | 2121643..2122956 | - | 1314 | WP_069197202.1 | Putative defective protein IntQ ; Integrase | Integrase |
| PS040_RS10480 () | 2123012..2123248 | - | 237 | WP_000528718.1 | excisionase family protein | - |
| PS040_RS10485 () | 2123257..2123403 | - | 147 | WP_032240805.1 | hypothetical protein | - |
| PS040_RS10490 () | 2123410..2123649 | - | 240 | Protein_2052 | DUF4222 domain-containing protein | - |
| PS040_RS10495 () | 2123654..2123776 | - | 123 | WP_021501359.1 | hypothetical protein | - |
| PS040_RS10500 () | 2123773..2124342 | - | 570 | WP_021501358.1 | hypothetical protein | - |
| PS040_RS10505 () | 2124339..2125088 | - | 750 | WP_273783610.1 | ORF6N domain-containing protein | - |
| PS040_RS10510 () | 2125132..2125959 | - | 828 | WP_000734576.1 | SPFH domain-containing protein | - |
| PS040_RS10515 () | 2126205..2126599 | - | 395 | Protein_2057 | hypothetical protein | - |
| PS040_RS10520 () | 2126596..2126814 | - | 219 | WP_001336513.1 | hypothetical protein | - |
| PS040_RS10525 () | 2126786..2127001 | - | 216 | WP_136750014.1 | hypothetical protein | - |
| PS040_RS10530 () | 2127001..2127360 | - | 360 | WP_000148631.1 | hypothetical protein | - |
| PS040_RS10535 () | 2127545..2127736 | - | 192 | WP_053264859.1 | hypothetical protein | - |
| PS040_RS10540 () | 2127733..2127924 | - | 192 | WP_000781553.1 | hypothetical protein | - |
| PS040_RS10545 () | 2127926..2128354 | - | 429 | WP_273783611.1 | helix-turn-helix transcriptional regulator | - |
| PS040_RS10550 () | 2128501..2129190 | - | 690 | WP_059332710.1 | LexA family transcriptional regulator | - |
| PS040_RS10555 () | 2129325..2129600 | + | 276 | WP_059332709.1 | YdaS family helix-turn-helix protein | - |
| PS040_RS10560 () | 2129610..2129918 | + | 309 | WP_273783614.1 | hypothetical protein | - |
| PS040_RS10565 () | 2130333..2131991 | + | 1659 | WP_273783616.1 | DEAD/DEAH box helicase | - |
| PS040_RS10570 () | 2131993..2132961 | + | 969 | WP_273783618.1 | toprim domain-containing protein | - |
| PS040_RS10575 () | 2132961..2133818 | + | 858 | WP_273783620.1 | helix-turn-helix domain-containing protein | - |
| PS040_RS10580 () | 2133818..2134648 | + | 831 | WP_273783622.1 | antitermination protein | - |
| PS040_RS10585 () | 2134900..2135682 | - | 783 | WP_273783624.1 | hypothetical protein | - |
| PS040_RS10590 () | 2136092..2136169 | + | 78 | Protein_2072 | phage holin | - |
| PS040_RS10595 () | 2136189..2138039 | + | 1851 | WP_150003659.1 | DUF1737 domain-containing protein | - |
| PS040_RS10600 () | 2138261..2138476 | + | 216 | WP_000284524.1 | class II holin family protein | - |
| PS040_RS10605 () | 2138476..2138973 | + | 498 | WP_000075132.1 | lysozyme RrrD | - |
| PS040_RS10610 () | 2138970..2139407 | + | 438 | WP_000092318.1 | lysis protein | - |
| PS040_RS10615 () | 2139665..2141200 | + | 1536 | WP_256878094.1 | IS21 family transposase ISSso4 | Transposase |
| PS040_RS10620 () | 2141217..2141972 | + | 756 | WP_001282649.1 | IS21 family transposase ISSso4 | Transposase |
| PS040_RS10625 () | 2142202..2142819 | + | 618 | WP_000881326.1 | Rha family transcriptional regulator | - |
| PS040_RS10630 () | 2142861..2143193 | + | 333 | WP_273783651.1 | hypothetical protein | - |
| PS040_RS10635 () | 2143315..2143824 | + | 510 | WP_000235446.1 | terminase small subunit | - |
| PS040_RS10640 () | 2143796..2145724 | + | 1929 | WP_273783652.1 | phage terminase large subunit family protein | - |
| PS040_RS10645 () | 2145708..2145914 | + | 207 | WP_000259002.1 | gpW family head-tail joining protein | - |
| PS040_RS10650 () | 2145911..2147503 | + | 1593 | WP_150003441.1 | phage portal protein | - |
| PS040_RS10655 () | 2147493..2148998 | + | 1506 | WP_052933362.1 | S49 family peptidase | - |
| PS040_RS10660 () | 2149035..2149382 | + | 348 | WP_273783660.1 | head decoration protein | - |
| PS040_RS10665 () | 2149440..2150468 | + | 1029 | WP_052933364.1 | major capsid protein | - |
| PS040_RS10670 () | 2150521..2150895 | + | 375 | WP_000201526.1 | DNA-packaging protein FI | - |
| PS040_RS10675 () | 2150888..2151241 | + | 354 | WP_001204540.1 | head-tail joining protein | - |
| PS040_RS10680 () | 2151253..2151831 | + | 579 | WP_032330265.1 | phage tail protein | - |
| PS040_RS10685 () | 2151828..2152223 | + | 396 | WP_032330264.1 | phage minor tail U family protein | - |
| PS040_RS10690 () | 2152231..2152971 | + | 741 | WP_032330267.1 | phage tail protein | - |
| PS040_RS10695 () | 2152987..2153409 | + | 423 | WP_032329098.1 | phage minor tail protein G | - |
| PS040_RS10700 () | 2153391..2153816 | + | 426 | WP_032329097.1 | phage tail assembly protein T | - |
| PS040_RS10705 () | 2153809..2156370 | + | 2562 | WP_101973023.1 | phage tail tape measure protein | - |
| PS040_RS10710 () | 2156367..2156696 | + | 330 | WP_000847401.1 | phage tail protein | - |
| PS040_RS10715 () | 2156696..2157394 | + | 699 | WP_273783673.1 | phage minor tail protein L | - |
| PS040_RS10720 () | 2157399..2158142 | + | 744 | WP_064759399.1 | C40 family peptidase | - |
| PS040_RS10725 () | 2158079..2158681 | + | 603 | WP_052931387.1 | tail assembly protein | - |
| PS040_RS10730 () | 2158742..2162239 | + | 3498 | WP_273783678.1 | host specificity protein J | - |
| PS040_RS10735 () | 2162309..2162908 | + | 600 | WP_273783681.1 | Outer membrane protein X | VF |
| PS040_RS10740 () | 2163105..2163563 | + | 459 | WP_000526113.1 | IS200-IS605 family transposase IS200C | Transposase |
| PS040_RS10745 () | 2163684..2164997 | + | 1314 | WP_273783686.1 | ISNCY family transposase KIS | Transposase |
| PS040_RS10750 () | 2164999..2165268 | + | 270 | WP_273783688.1 | phage tail fiber C-terminal domain-containing protein | - |
| PS040_RS10755 () | 2165321..2166511 | - | 1191 | WP_273783690.1 | IS4 family transposase ISEc60 | Transposase |
| PS040_RS10760 () | 2166678..2166765 | + | 88 | Protein_2106 | hypothetical protein | - |
| PS040_RS10765 () | 2166785..2169157 | + | 2373 | WP_273783692.1 | hypothetical protein | VF |
| PS040_RS10770 () | 2169526..2169735 | + | 210 | Protein_2108 | hypothetical protein | VF |
| PS040_RS10775 () | 2169846..2169959 | - | 114 | Protein_2109 | YkgJ family cysteine cluster protein | - |
| PS040_RS10780 () | 2170236..2170394 | + | 159 | Protein_2110 | tail fiber assembly protein | - |
| PS040_RS10785 () | 2170570..2171154 | + | 585 | WP_273783694.1 | hypothetical protein | VF |
| PS040_RS10790 () | 2171227..2171856 | + | 630 | Protein_2112 | hypothetical protein | VF |
| PS040_RS10795 () | 2171938..2172114 | + | 177 | Protein_2113 | T3SS effector NleG | - |
| PS040_RS10800 () | 2172205..2173433 | + | 1229 | WP_273783696.1 | IS3 family transposase IS2 | Transposase |
| PS040_RS10805 () | 2173445..2173915 | + | 471 | Protein_2115 | hypothetical protein | VF |
| PS040_RS10810 () | 2174077..2174325 | - | 249 | WP_273783699.1 | DinI-like family protein | - |
| PS040_RS10815 () | 2174588..2174683 | - | 96 | Protein_2117 | hypothetical protein | - |
| PS040_RS10820 () | 2174680..2175246 | - | 567 | WP_000891645.1 | hydrolase | - |
| PS040_RS10825 () | 2175557..2177329 | + | 1773 | WP_273783701.1 | aspartate--tRNA ligase | - |
| PS040_RS10830 () | 2177447..2177899 | + | 453 | WP_010338146.1 | dihydroneopterin triphosphate diphosphatase | - |
| PS040_RS10835 () | 2177929..2178669 | + | 741 | WP_273783703.1 | putative transcriptional regulatory protein YebC | VF |
| PS040_RS10840 () | 2178704..2179225 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| PS040_RS10845 () | 2179227..2179829 | - | 603 | WP_001024933.1 | YebB family permuted papain-like enzyme | - |
| PS040_RS10850 () | 2180138..2180824 | + | 687 | WP_054411264.1 | hypothetical protein | - |
| PS040_RS10855 () | 2180920..2181531 | + | 612 | WP_000580343.1 | Holliday junction branch migration protein RuvA | - |
| PS040_RS10860 () | 2181540..2182550 | + | 1011 | WP_000568517.1 | Holliday junction branch migration DNA helicase RuvB | - |
| PS040_RS10865 () | 2182698..2183483 | - | 786 | WP_000571487.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| PS040_RS10870 () | 2183480..2184235 | - | 756 | WP_025238861.1 | Zinc import ATP-binding protein ZnuC | VF |
| PS040_RS10875 () | 2184314..2185246 | + | 933 | WP_273783705.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| PS040_RS10880 () | 2185262..2186584 | + | 1323 | WP_273783707.1 | murein DD-endopeptidase MepM | - |
| PS040_RS10885 () | 2186702..2187676 | + | 975 | WP_002462315.1 | Lipid A biosynthesis myristoyltransferase | VF |
| PS040_RS10890 () | 2187819..2189261 | - | 1443 | WP_000091143.1 | pyruvate kinase | - |
| PS040_RS10895 () | 2189388..2190257 | - | 870 | WP_001056700.1 | DNA-binding transcriptional regulator HexR | - |
| PS040_RS10900 () | 2190280..2190498 | + | 219 | WP_044709413.1 | hypothetical protein | - |
| PS040_RS10905 () | 2190605..2192080 | + | 1476 | WP_000301734.1 | glucose-6-phosphate dehydrogenase | - |
| PS040_RS10910 () | 2192315..2194126 | + | 1812 | WP_001069473.1 | phosphogluconate dehydratase | - |
| PS040_RS10915 () | 2194165..2194806 | + | 642 | WP_059234878.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| PS040_RS10920 () | 2194861..2196039 | - | 1179 | WP_059234876.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| PS040_RS10925 () | 2196173..2196463 | + | 291 | WP_000257733.1 | DNA damage-inducible protein YebG | - |
| PS040_RS10930 () | 2196530..2196886 | + | 357 | WP_010343965.1 | protein YebF | - |
| PS040_RS10935 () | 2197200..2199257 | + | 2058 | WP_059215732.1 | oligopeptidase B | - |
| PS040_RS10940 () | 2199254..2199916 | - | 663 | WP_000944295.1 | exodeoxyribonuclease X | - |
| PS040_RS10945 () | 2199940..2200152 | - | 213 | Protein_2143 | carbon-nitrogen hydrolase family protein YobB | - |
| PS040_RS10950 () | 2200318..2200548 | - | 231 | WP_000916758.1 | DNA polymerase III subunit theta | - |
| PS040_RS10955 () | 2200687..2201064 | + | 378 | WP_000741562.1 | CopC domain-containing protein YobA | - |
| PS040_RS10960 () | 2201068..2201940 | + | 873 | WP_059234872.1 | copper homeostasis membrane protein CopD | - |
| PS040_RS10965 () | 2201953..2202294 | + | 342 | WP_000976487.1 | DUF2511 domain-containing protein | - |
| - | 2202324..2202556 | - | 233 | - | - | Antitoxin Detail |
| - | 2202451..2202554 | + | 104 | - | - | Toxin Detail |
| PS040_RS10970 () | 2204298..2204618 | + | 321 | WP_054411012.1 | hypothetical protein | - |
| PS040_RS10975 () | 2204691..2206148 | + | 1458 | WP_273783877.1 | Trk system potassium transporter TrkG | - |
| PS040_RS10980 () | 2206468..2207259 | - | 792 | WP_231932500.1 | hypothetical protein | - |
| PS040_RS10985 () | 2207261..2208250 | - | 990 | WP_273783710.1 | hypothetical protein | - |
| PS040_RS10990 () | 2208578..2209312 | - | 735 | WP_000962058.1 | hypothetical protein | - |
| PS040_RS10995 () | 2209574..2210230 | - | 657 | WP_059242108.1 | hypothetical protein | VF |
| PS040_RS11000 () | 2210435..2210869 | + | 435 | WP_059234869.1 | Effector protein NleF | VF |
| PS040_RS11005 () | 2210963..2211619 | + | 657 | WP_025238869.1 | protein-serine/threonine phosphatase | - |
| PS040_RS11010 () | 2211620..2211811 | - | 192 | WP_025238870.1 | YebW family protein | - |
| PS040_RS11015 () | 2211917..2212153 | - | 237 | WP_059223937.1 | DUF1480 family protein | - |
| PS040_RS11020 () | 2212271..2213710 | - | 1440 | WP_059218705.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| PS040_RS11025 () | 2213790..2216423 | - | 2634 | WP_059234865.1 | Intermembrane transport protein YebT | VF |
| PS040_RS11030 () | 2216392..2217675 | - | 1284 | WP_001207285.1 | membrane integrity lipid transport subunit YebS | - |
| PS040_RS11035 () | 2217805..2218302 | + | 498 | WP_001043893.1 | L-methionine (R)-S-oxide reductase | - |
| PS040_RS11040 () | 2218399..2219097 | + | 699 | WP_000431383.1 | RNA chaperone ProQ | - |
| PS040_RS11045 () | 2219117..2221165 | + | 2049 | WP_001055803.1 | carboxy terminal-processing peptidase | - |
| PS040_RS11050 () | 2221357..2222238 | + | 882 | WP_000984517.1 | protease HtpX | - |
| PS040_RS11055 () | 2222283..2223656 | - | 1374 | WP_059220018.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|