MGE detailed information
MGE type: Conjugative plasmid MGE length: 84891 bp
Accession: NZ_CP117631 Location: 1..84891 Organism: Escherichia albertii strain BIA_22 Replicon: plasmid pEA22_3
Accession: NZ_CP117631 Location: 1..84891 Organism: Escherichia albertii strain BIA_22 Replicon: plasmid pEA22_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS041_RS25745 (1) | 1..858 | + | 858 | WP_273810623.1 | incFII family plasmid replication initiator RepA | - |
| PS041_RS25750 (1768) | 1768..1905 | + | 138 | Protein_1 | XRE family transcriptional regulator | - |
| PS041_RS25755 (1925) | 1925..2188 | + | 264 | WP_001089474.1 | hypothetical protein | - |
| PS041_RS25760 (2178) | 2178..2477 | + | 300 | WP_000119542.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PS041_RS25765 (2835) | 2835..3110 | + | 276 | WP_000877662.1 | bacteriocin immunity protein | - |
| PS041_RS25770 (3188) | 3188..4375 | - | 1188 | WP_025999368.1 | MFS transporter | - |
| PS041_RS25775 (4432) | 4432..5193 | - | 762 | WP_000020504.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| PS041_RS25780 (5193) | 5193..6230 | - | 1038 | WP_032241771.1 | Hemin transport system permease protein HmuU | VF |
| PS041_RS25785 (6230) | 6230..7228 | - | 999 | WP_004175650.1 | ABC transporter substrate-binding protein | - |
| PS041_RS25790 (7378) | 7378..7482 | - | 105 | Protein_9 | integrase core domain-containing protein | - |
| PS041_RS25795 (7572) | 7572..7997 | + | 426 | WP_032279819.1 | IS66 family transposase ISEc23 | Transposase |
| PS041_RS25800 (7994) | 7994..8344 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| PS041_RS25805 (8375) | 8375..9988 | + | 1614 | WP_075211705.1 | IS66 family transposase ISEc23 | Transposase |
| PS041_RS25810 (10386) | 10386..10973 | + | 588 | WP_032280144.1 | serine acetyltransferase | - |
| PS041_RS25815 (11255) | 11255..11848 | - | 594 | WP_032280163.1 | ProQ/FINO family protein | - |
| PS041_RS25820 (11967) | 11967..12224 | - | 258 | WP_075207891.1 | hypothetical protein | - |
| PS041_RS25825 (12346) | 12346..12936 | - | 591 | WP_032280054.1 | hypothetical protein | - |
| PS041_RS25830 (12936) | 12936..13169 | - | 234 | WP_032280055.1 | hypothetical protein | - |
| PS041_RS25835 (13498) | 13498..13950 | + | 453 | WP_000670960.1 | acyltransferase | - |
| PS041_RS25840 (13982) | 13982..15514 | - | 1533 | WP_001017349.1 | NAD(P)-binding domain-containing protein | - |
| PS041_RS25845 (15511) | 15511..15780 | - | 270 | WP_000379710.1 | SemiSWEET transporter | - |
| PS041_RS25850 (15782) | 15782..16798 | - | 1017 | WP_032280058.1 | Gfo/Idh/MocA family oxidoreductase | - |
| PS041_RS25855 (16801) | 16801..17628 | - | 828 | WP_000154003.1 | HAD-IIB family hydrolase | - |
| PS041_RS25860 (17612) | 17612..18850 | - | 1239 | WP_012006540.1 | 3-oxo-glucose-6-phosphate:glutamate aminotransferase | VF |
| PS041_RS25865 (19390) | 19390..20523 | + | 1134 | WP_126755948.1 | DUF3800 domain-containing protein | - |
| PS041_RS25870 (20543) | 20543..20827 | + | 285 | WP_000642771.1 | hypothetical protein | - |
| PS041_RS25875 (20824) | 20824..21021 | - | 198 | WP_000215657.1 | hypothetical protein | - |
| PS041_RS25880 (21331) | 21331..21822 | + | 492 | WP_000528930.1 | HEPN family nuclease | - |
| PS041_RS25885 (21834) | 21834..22592 | + | 759 | WP_023063772.1 | hypothetical protein | - |
| PS041_RS25890 (22814) | 22814..24406 | + | 1593 | WP_001350003.1 | hypothetical protein | - |
| PS041_RS25895 (24441) | 24441..25565 | + | 1125 | WP_032174239.1 | DUF4238 domain-containing protein | - |
| PS041_RS25900 (25565) | 25565..25855 | + | 291 | WP_000648897.1 | hypothetical protein | - |
| PS041_RS25905 (26645) | 26645..27058 | + | 414 | WP_000465040.1 | hypothetical protein | - |
| PS041_RS25910 (27060) | 27060..27841 | + | 782 | Protein_33 | site-specific integrase | - |
| PS041_RS25915 (28014) | 28014..28367 | + | 354 | WP_000864812.1 | colicin M immunity protein | - |
| PS041_RS25920 (28417) | 28417..29232 | - | 816 | WP_000449473.1 | lipid II-degrading bacteriocin colicin M | - |
| PS041_RS25925 (29475) | 29475..30002 | + | 528 | WP_273810645.1 | colicin B immunity protein | - |
| PS041_RS25930 (30020) | 30020..30961 | - | 942 | Protein_37 | colicin-like bacteriocin tRNase domain-containing protein | - |
| PS041_RS25935 (31017) | 31017..31714 | + | 698 | WP_094096600.1 | IS1 family transposase IS1A | Transposase |
| PS041_RS25940 (32094) | 32094..32444 | - | 351 | WP_273810647.1 | plasmid partitioning/stability family protein | - |
| PS041_RS25945 (32447) | 32447..33409 | - | 963 | WP_000959880.1 | plasmid segregation protein ParM | - |
| PS041_RS25950 (33557) | 33557..33775 | + | 219 | Protein_41 | hypothetical protein | - |
| PS041_RS25955 (33879) | 33879..34895 | + | 1017 | WP_000219394.1 | IS110 family transposase ISShdy1 | Transposase |
| PS041_RS25960 (35442) | 35442..35516 | + | 75 | Protein_43 | hypothetical protein | - |
| PS041_RS25965 (35593) | 35593..36276 | + | 684 | WP_000085940.1 | DNA methylase | - |
| PS041_RS25970 (36277) | 36277..36498 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| PS041_RS25975 (36428) | 36428..36946 | + | 519 | WP_223174655.1 | DUF1380 family protein | - |
| PS041_RS25980 (36991) | 36991..37761 | + | 771 | WP_001006200.1 | hypothetical protein | - |
| PS041_RS25985 (38174) | 38174..38599 | + | 426 | WP_024214837.1 | antirestriction protein | - |
| PS041_RS25990 (38646) | 38646..39068 | + | 423 | WP_001587500.1 | DUF1380 family protein | - |
| PS041_RS25995 (39065) | 39065..39256 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| PS041_RS26000 (40294) | 40294..40524 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| PS041_RS26005 (40576) | 40576..41937 | + | 1362 | WP_001825120.1 | DUF3560 domain-containing protein | - |
| PS041_RS26010 (41985) | 41985..42548 | + | 564 | WP_256878427.1 | class I SAM-dependent methyltransferase | - |
| PS041_RS26015 (42545) | 42545..42763 | + | 219 | WP_071588970.1 | hypothetical protein | - |
| PS041_RS26020 (42700) | 42700..42933 | + | 234 | WP_071588969.1 | hypothetical protein | - |
| PS041_RS26025 (43174) | 43174..43434 | + | 261 | WP_042046747.1 | hypothetical protein | - |
| PS041_RS26030 (43551) | 43551..44537 | - | 987 | WP_273810655.1 | IS110 family transposase IS1663 | Transposase |
| PS041_RS26040 (46118) | 46118..46405 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| PS041_RS26045 (46523) | 46523..47344 | + | 822 | WP_001234426.1 | DUF932 domain-containing protein | - |
| PS041_RS26050 (47641) | 47641..48288 | - | 648 | WP_155953419.1 | hypothetical protein | VF |
| PS041_RS26055 (48564) | 48564..48947 | + | 384 | WP_001151530.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| PS041_RS26060 (49139) | 49139..49786 | + | 648 | WP_096040777.1 | transcriptional regulator TraJ family protein | - |
| PS041_RS26065 (49906) | 49906..50133 | + | 228 | WP_000589558.1 | conjugal transfer relaxosome protein TraY | - |
| PS041_RS26070 (50167) | 50167..50559 | + | 393 | WP_024127870.1 | type IV conjugative transfer system pilin TraA | - |
| PS041_RS26075 (50574) | 50574..50885 | + | 312 | WP_001585108.1 | type IV conjugative transfer system protein TraL | - |
| PS041_RS26080 (50907) | 50907..51473 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| PS041_RS26085 (51460) | 51460..52188 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| PS041_RS26090 (52188) | 52188..53615 | + | 1428 | WP_273825561.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| PS041_RS26095 (53605) | 53605..54195 | + | 591 | WP_001376242.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| PS041_RS26100 (54182) | 54182..54379 | + | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
| PS041_RS26105 (54392) | 54392..54643 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| PS041_RS26110 (54640) | 54640..55155 | + | 516 | WP_016241856.1 | type IV conjugative transfer system lipoprotein TraV | - |
| PS041_RS26115 (55290) | 55290..55511 | + | 222 | WP_001278685.1 | conjugal transfer protein TraR | - |
| PS041_RS26120 (55671) | 55671..58298 | + | 2628 | WP_181668576.1 | type IV secretion system protein TraC | - |
| PS041_RS26125 (58295) | 58295..58681 | + | 387 | WP_181668575.1 | type-F conjugative transfer system protein TrbI | - |
| PS041_RS26130 (58678) | 58678..59310 | + | 633 | WP_001203749.1 | type-F conjugative transfer system protein TraW | - |
| PS041_RS26135 (59307) | 59307..60299 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| PS041_RS26140 (60325) | 60325..60789 | + | 465 | WP_096948751.1 | hypothetical protein | - |
| PS041_RS26145 (60800) | 60800..61115 | + | 316 | Protein_80 | hypothetical protein | - |
| PS041_RS26150 (61108) | 61108..61560 | + | 453 | WP_001349502.1 | hypothetical protein | - |
| PS041_RS26155 (61588) | 61588..62226 | + | 639 | WP_273810593.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| PS041_RS26160 (62223) | 62223..64031 | + | 1809 | WP_273810592.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| PS041_RS26165 (64058) | 64058..64315 | + | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| PS041_RS26170 (64308) | 64308..65051 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| PS041_RS26175 (65067) | 65067..65414 | + | 348 | WP_001287677.1 | conjugal transfer protein TrbA | - |
| PS041_RS26180 (65416) | 65416..65730 | - | 315 | WP_000415566.1 | protein ArtA | - |
| PS041_RS26185 (65811) | 65811..66095 | + | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| PS041_RS26190 (66082) | 66082..66627 | + | 546 | WP_000059833.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| PS041_RS26195 (66557) | 66557..66919 | + | 363 | WP_174491168.1 | P-type conjugative transfer protein TrbJ | - |
| PS041_RS26200 (66919) | 66919..68292 | + | 1374 | WP_001137358.1 | conjugal transfer pilus assembly protein TraH | - |
| PS041_RS26205 (68289) | 68289..71111 | + | 2823 | WP_273810591.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| PS041_RS26210 (71126) | 71126..71629 | + | 504 | WP_000605510.1 | hypothetical protein | - |
| PS041_RS26215 (71661) | 71661..72392 | + | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| PS041_RS26220 (72644) | 72644..74869 | + | 2226 | WP_273825582.1 | type IV conjugative transfer system coupling protein TraD | - |
| PS041_RS26225 (74869) | 74869..80126 | + | 5258 | Protein_96 | Multifunctional conjugation protein TraI | Relaxase |
| PS041_RS26230 (80146) | 80146..80892 | + | 747 | WP_273825583.1 | conjugal transfer pilus acetylase TraX | - |
| PS041_RS26235 (80947) | 80947..81507 | + | 561 | WP_273825584.1 | fertility inhibition protein FinO | - |
| PS041_RS26240 (81643) | 81643..81855 | + | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| PS041_RS26245 (82101) | 82101..82562 | + | 462 | WP_000978818.1 | thermonuclease family protein | - |
| PS041_RS26250 (82608) | 82608..82817 | + | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| PS041_RS26255 (83011) | 83011..83421 | + | 411 | WP_273810621.1 | hypothetical protein | - |
| - (83792) | 83792..83853 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (83792) | 83792..83853 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (83792) | 83792..83853 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (83792) | 83792..83853 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| PS041_RS26260 (83897) | 83897..84046 | + | 150 | WP_001336447.1 | Hok/Gef family protein | Toxin Detail |
| PS041_RS26265 (84330) | 84330..84590 | + | 261 | WP_021536205.1 | replication regulatory protein RepA | - |
| PS041_RS26270 (84694) | 84694..84879 | + | 186 | WP_273810622.1 | plasmid copy control protein CopA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|