MGE detailed information
MGE type: Conjugative plasmid MGE length: 136544 bp
Accession: NZ_CP117621 Location: 1..136544 Organism: Escherichia albertii strain BIA_24 Replicon: plasmid pEA24_1
Accession: NZ_CP117621 Location: 1..136544 Organism: Escherichia albertii strain BIA_24 Replicon: plasmid pEA24_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS039_RS23515 (1) | 1..1023 | + | 1023 | WP_256878410.1 | plasmid replication initiator RepA | - |
| PS039_RS23520 (2246) | 2246..2656 | - | 411 | WP_256878411.1 | subtilase family AB5 toxin binding subunit | - |
| PS039_RS23525 (2766) | 2766..3491 | - | 726 | WP_256878412.1 | enterotoxin A family protein | - |
| PS039_RS23530 (3814) | 3814..4942 | + | 1129 | Protein_3 | IS3 family transposase ISEc17 | Transposase |
| PS039_RS23535 (4972) | 4972..5178 | - | 207 | Protein_4 | IS3 family transposase IS2 | Transposase |
| PS039_RS23540 (5275) | 5275..5484 | + | 210 | Protein_5 | DUF4113 domain-containing protein | - |
| PS039_RS23545 (5486) | 5486..5902 | - | 417 | WP_273775112.1 | plasmid partitioning/stability family protein | - |
| PS039_RS23550 (5895) | 5895..6875 | - | 981 | WP_256878413.1 | plasmid segregation protein ParM | - |
| PS039_RS23555 (7287) | 7287..7595 | - | 309 | WP_000030204.1 | molecular chaperone GroEL | - |
| PS039_RS23560 (7682) | 7682..8326 | - | 645 | WP_001144036.1 | ParA family protein | - |
| PS039_RS23565 (8506) | 8506..9314 | - | 809 | Protein_10 | site-specific integrase | - |
| PS039_RS23570 (9315) | 9315..9620 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| PS039_RS23575 (9622) | 9622..9840 | - | 219 | WP_000813639.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| PS039_RS23580 (10313) | 10313..11441 | - | 1129 | Protein_13 | IS3 family transposase ISEc17 | Transposase |
| PS039_RS23585 (11671) | 11671..11844 | + | 174 | Protein_14 | transposase family protein | - |
| PS039_RS23590 (11805) | 11805..12772 | - | 968 | Protein_15 | integrase core domain-containing protein | - |
| PS039_RS23595 (13603) | 13603..14580 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| PS039_RS23600 (14859) | 14859..15599 | - | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| PS039_RS23605 (15720) | 15720..15842 | - | 123 | Protein_18 | hypothetical protein | - |
| PS039_RS23610 (15880) | 15880..16034 | + | 155 | Protein_19 | IS110 family transposase | - |
| PS039_RS23615 (16040) | 16040..16219 | - | 180 | Protein_20 | IS3 family transposase ISKpn38 | Transposase |
| PS039_RS23620 (16332) | 16332..17021 | - | 690 | Protein_21 | enterotoxin | - |
| PS039_RS23625 (17227) | 17227..26061 | - | 8835 | WP_273810603.1 | TcdA/TcdB catalytic glycosyltransferase domain-containing protein | - |
| PS039_RS23630 (26333) | 26333..26498 | - | 166 | Protein_23 | IS3 family transposase | - |
| PS039_RS23635 (26652) | 26652..27284 | + | 633 | Protein_24 | IS3 family transposase IS911 | Transposase |
| PS039_RS23640 (27362) | 27362..27520 | + | 159 | Protein_25 | IS66 family transposase IS682 | Transposase |
| PS039_RS23645 (27650) | 27650..28186 | + | 537 | Protein_26 | iron/manganese ABC transporter permease subunit SitD | - |
| PS039_RS23650 (28174) | 28174..28865 | + | 692 | Protein_27 | IS66 family transposase ISCro1 | Transposase |
| PS039_RS23655 (29043) | 29043..30236 | - | 1194 | WP_256878418.1 | MFS transporter | - |
| PS039_RS23660 (30372) | 30372..32096 | + | 1725 | WP_256878442.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| PS039_RS23665 (32097) | 32097..33044 | + | 948 | WP_256878419.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| PS039_RS23670 (33044) | 33044..34786 | + | 1743 | WP_256878420.1 | Aerobactin synthase | VF |
| PS039_RS23675 (34783) | 34783..36108 | + | 1326 | WP_256878421.1 | L-lysine N6-monooxygenase | VF |
| PS039_RS23680 (36114) | 36114..38309 | + | 2196 | WP_256878443.1 | Ferric aerobactin receptor | VF |
| PS039_RS23685 (38728) | 38728..40123 | + | 1396 | Protein_34 | IS3 family transposase ISKpn38 | Transposase |
| PS039_RS23690 (40196) | 40196..40771 | - | 576 | WP_256878422.1 | hypothetical protein | - |
| PS039_RS23695 (40759) | 40759..41028 | - | 270 | WP_097411212.1 | hypothetical protein | - |
| PS039_RS23700 (41228) | 41228..42455 | + | 1228 | Protein_37 | IS3 family transposase IS2 | Transposase |
| PS039_RS23705 (42466) | 42466..43416 | - | 951 | Protein_38 | translesion error-prone DNA polymerase V subunit UmuC | - |
| PS039_RS23710 (43416) | 43416..43802 | - | 387 | WP_273775005.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PS039_RS23715 (43850) | 43850..44098 | - | 249 | WP_032084478.1 | DinI-like family protein | - |
| PS039_RS23720 (44516) | 44516..45418 | + | 903 | WP_273775143.1 | DUF1281 domain-containing protein | - |
| PS039_RS23725 (45415) | 45415..45657 | + | 243 | WP_001503439.1 | hypothetical protein | - |
| PS039_RS23730 (45755) | 45755..46771 | + | 1017 | WP_000219394.1 | IS110 family transposase ISShdy1 | Transposase |
| PS039_RS23735 (47318) | 47318..47392 | + | 75 | Protein_44 | hypothetical protein | - |
| PS039_RS23740 (47468) | 47468..47539 | + | 72 | Protein_45 | adenine-specific DNA-methyltransferase | - |
| PS039_RS23745 (47621) | 47621..49321 | - | 1701 | WP_021579017.1 | group II intron reverse transcriptase/maturase | - |
| PS039_RS23750 (49943) | 49943..50554 | + | 612 | Protein_47 | DNA methylase | - |
| PS039_RS23755 (50555) | 50555..50776 | + | 222 | WP_059328770.1 | hypothetical protein | - |
| PS039_RS23760 (50670) | 50670..51222 | + | 553 | Protein_49 | DUF1380 family protein | - |
| PS039_RS23765 (51268) | 51268..52044 | + | 777 | WP_273810604.1 | hypothetical protein | - |
| PS039_RS23770 (52458) | 52458..52883 | + | 426 | WP_062859984.1 | antirestriction protein | - |
| PS039_RS23775 (52930) | 52930..53352 | + | 423 | WP_072664734.1 | DUF1380 family protein | - |
| PS039_RS23780 (53349) | 53349..53540 | + | 192 | WP_001027504.1 | hypothetical protein | - |
| PS039_RS23785 (53897) | 53897..54051 | - | 155 | Protein_54 | hypothetical protein | - |
| PS039_RS23790 (54568) | 54568..54798 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| PS039_RS23795 (54850) | 54850..56211 | + | 1362 | WP_273810605.1 | DUF3560 domain-containing protein | - |
| PS039_RS23800 (56259) | 56259..56822 | + | 564 | WP_105267018.1 | class I SAM-dependent methyltransferase | - |
| PS039_RS23805 (56908) | 56908..57368 | - | 461 | Protein_58 | hypothetical protein | - |
| PS039_RS23810 (57438) | 57438..57698 | + | 261 | WP_255803988.1 | single-stranded DNA-binding protein | - |
| PS039_RS23815 (57815) | 57815..58783 | - | 969 | WP_273810608.1 | IS110 family transposase IS1663 | Transposase |
| PS039_RS23820 (58874) | 58874..59293 | + | 420 | Protein_61 | single-stranded DNA-binding protein | - |
| PS039_RS23825 (59350) | 59350..59583 | + | 234 | WP_000006009.1 | DUF905 family protein | - |
| PS039_RS23830 (59649) | 59649..61592 | + | 1944 | Protein_63 | ParB/RepB/Spo0J family partition protein | - |
| PS039_RS23835 (61661) | 61661..62095 | + | 435 | WP_273784012.1 | conjugation system SOS inhibitor PsiB | - |
| PS039_RS23840 (62092) | 62092..62811 | + | 720 | WP_273810606.1 | plasmid SOS inhibition protein A | - |
| PS039_RS23845 (62808) | 62808..63122 | + | 315 | WP_273784016.1 | theronine dehydrogenase | - |
| - (63071) | 63071..63283 | + | 213 | NuclAT_0 | - | - |
| - (63071) | 63071..63283 | + | 213 | NuclAT_0 | - | - |
| - (63071) | 63071..63283 | + | 213 | NuclAT_0 | - | - |
| - (63071) | 63071..63283 | + | 213 | NuclAT_0 | - | - |
| PS039_RS23850 (63271) | 63271..63423 | + | 153 | Protein_67 | DUF5431 family protein | - |
| PS039_RS23855 (63368) | 63368..63490 | + | 123 | WP_223170659.1 | type I toxin-antitoxin system Hok family toxin | - |
| PS039_RS23860 (63889) | 63889..65556 | - | 1668 | WP_273810607.1 | group II intron reverse transcriptase/maturase | - |
| PS039_RS23865 (65601) | 65601..67193 | - | 1593 | WP_273810436.1 | IS66 family transposase ISEc23 | Transposase |
| PS039_RS23870 (67224) | 67224..67574 | - | 351 | WP_000624718.1 | IS66 family transposase ISEc47 | Transposase |
| PS039_RS23875 (67571) | 67571..67996 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| PS039_RS23880 (68336) | 68336..68914 | - | 579 | WP_256878398.1 | hypothetical protein | VF |
| PS039_RS23885 (69248) | 69248..69430 | + | 183 | WP_256878447.1 | IS3 family transposase ISEc17 | Transposase |
| PS039_RS23890 (69389) | 69389..69946 | - | 558 | Protein_75 | Putative type II secretion system L-type protein YghE | VF |
| PS039_RS23895 (70093) | 70093..70656 | - | 564 | WP_256878397.1 | Type II secretion system protein H | VF |
| PS039_RS23900 (70660) | 70660..71079 | - | 420 | WP_273784050.1 | Type II secretion system protein G | VF |
| PS039_RS23905 (71096) | 71096..71246 | - | 151 | Protein_78 | hypothetical protein | VF |
| PS039_RS23910 (71388) | 71388..71501 | - | 114 | Protein_79 | hypothetical protein | VF |
| PS039_RS23915 (71637) | 71637..72197 | - | 561 | WP_273810587.1 | fertility inhibition protein FinO | - |
| PS039_RS23920 (72252) | 72252..72998 | - | 747 | WP_273810588.1 | conjugal transfer pilus acetylase TraX | - |
| PS039_RS23925 (73018) | 73018..78288 | - | 5271 | WP_273810589.1 | Multifunctional conjugation protein TraI | Relaxase |
| PS039_RS23930 (78288) | 78288..80441 | - | 2154 | WP_273810590.1 | type IV conjugative transfer system coupling protein TraD | - |
| PS039_RS23935 (80695) | 80695..81426 | - | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| PS039_RS23940 (81458) | 81458..81961 | - | 504 | WP_000605510.1 | hypothetical protein | - |
| PS039_RS23945 (81976) | 81976..84798 | - | 2823 | WP_273810591.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| PS039_RS23950 (84795) | 84795..86168 | - | 1374 | WP_001137358.1 | conjugal transfer pilus assembly protein TraH | - |
| PS039_RS23955 (86168) | 86168..86530 | - | 363 | WP_174491168.1 | P-type conjugative transfer protein TrbJ | - |
| PS039_RS23960 (86460) | 86460..87005 | - | 546 | WP_000059833.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| PS039_RS23965 (86992) | 86992..87276 | - | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| PS039_RS23970 (87357) | 87357..87671 | + | 315 | WP_000415566.1 | protein ArtA | - |
| PS039_RS23975 (87673) | 87673..88020 | - | 348 | WP_001287910.1 | conjugal transfer protein TrbA | - |
| PS039_RS23980 (88036) | 88036..88779 | - | 744 | WP_001030377.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| PS039_RS23985 (88772) | 88772..89029 | - | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| PS039_RS23990 (89056) | 89056..90864 | - | 1809 | WP_273810592.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| PS039_RS23995 (90861) | 90861..91499 | - | 639 | WP_273810593.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| PS039_RS24000 (91527) | 91527..91793 | - | 267 | Protein_97 | hypothetical protein | - |
| PS039_RS24005 (91849) | 91849..92546 | + | 698 | WP_094096600.1 | IS1 family transposase IS1S | Transposase |
| PS039_RS24010 (92561) | 92561..92755 | - | 195 | Protein_99 | hypothetical protein | - |
| PS039_RS24015 (92748) | 92748..93063 | - | 316 | Protein_100 | hypothetical protein | - |
| PS039_RS24020 (93074) | 93074..93538 | - | 465 | WP_000277847.1 | hypothetical protein | - |
| PS039_RS24025 (93564) | 93564..94556 | - | 993 | WP_273810594.1 | conjugal transfer pilus assembly protein TraU | - |
| PS039_RS24030 (94553) | 94553..95185 | - | 633 | WP_001203749.1 | type-F conjugative transfer system protein TraW | - |
| PS039_RS24035 (95182) | 95182..95568 | - | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| PS039_RS24040 (95565) | 95565..98192 | - | 2628 | WP_273810595.1 | type IV secretion system protein TraC | - |
| PS039_RS24045 (98352) | 98352..98573 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| PS039_RS24050 (98708) | 98708..99223 | - | 516 | WP_273810596.1 | type IV conjugative transfer system lipoprotein TraV | - |
| PS039_RS24055 (99220) | 99220..99471 | - | 252 | WP_273810597.1 | conjugal transfer protein TrbG | - |
| PS039_RS24060 (99464) | 99464..99784 | - | 321 | WP_273810598.1 | conjugal transfer protein TrbD | - |
| PS039_RS24065 (99771) | 99771..100334 | - | 564 | WP_059320943.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| PS039_RS24070 (100324) | 100324..101775 | - | 1452 | WP_273810599.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| PS039_RS24075 (101775) | 101775..102503 | - | 729 | WP_001230809.1 | type-F conjugative transfer system secretin TraK | - |
| PS039_RS24080 (102490) | 102490..103056 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| PS039_RS24085 (103078) | 103078..103389 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| PS039_RS24090 (103404) | 103404..103769 | - | 366 | WP_273810600.1 | type IV conjugative transfer system pilin TraA | - |
| PS039_RS24095 (103803) | 103803..104030 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| PS039_RS24100 (104124) | 104124..104810 | - | 687 | WP_000332484.1 | PAS domain-containing protein | - |
| PS039_RS24105 (105001) | 105001..105384 | - | 384 | WP_000124981.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| PS039_RS24110 (105661) | 105661..106308 | + | 648 | WP_273810601.1 | hypothetical protein | VF |
| PS039_RS24115 (106604) | 106604..107424 | - | 821 | Protein_120 | DUF932 domain-containing protein | - |
| PS039_RS24120 (107543) | 107543..107830 | - | 288 | Protein_121 | hypothetical protein | - |
| PS039_RS24125 (108055) | 108055..108228 | + | 174 | Protein_122 | hypothetical protein | - |
| PS039_RS24130 (109036) | 109036..109461 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| PS039_RS24135 (109458) | 109458..109808 | + | 351 | WP_000624718.1 | IS66 family transposase ISEc47 | Transposase |
| PS039_RS24140 (109839) | 109839..111431 | + | 1593 | WP_273810436.1 | IS66 family transposase ISEc23 | Transposase |
| PS039_RS24145 (111454) | 111454..112252 | - | 799 | Protein_126 | IS110 family transposase ISPlu13 | Transposase |
| PS039_RS24150 (112301) | 112301..113257 | + | 957 | Protein_127 | IS3 family transposase | - |
| PS039_RS24155 (113658) | 113658..117776 | + | 4119 | WP_273810602.1 | Hemoglobin-binding protease hbp autotransporter | VF |
| PS039_RS24160 (117961) | 117961..118345 | + | 385 | Protein_129 | transposase | - |
| PS039_RS24165 (118474) | 118474..120043 | - | 1570 | Protein_130 | IS66 family transposase | - |
| PS039_RS24170 (120063) | 120063..120410 | - | 348 | WP_064160280.1 | IS66 family transposase ISCro1 | Transposase |
| PS039_RS24175 (120410) | 120410..121060 | - | 651 | Protein_132 | IS66 family transposase IS679 | Transposase |
| PS039_RS24180 (121142) | 121142..121549 | - | 408 | WP_256878400.1 | hypothetical protein | - |
| PS039_RS24185 (121777) | 121777..122013 | - | 237 | WP_273775018.1 | hypothetical protein | - |
| PS039_RS24190 (122038) | 122038..122169 | - | 132 | WP_273775146.1 | hypothetical protein | - |
| PS039_RS24195 (122283) | 122283..123038 | - | 756 | WP_001282649.1 | IS21 family transposase ISSso4 | Transposase |
| PS039_RS24200 (123055) | 123055..124590 | - | 1536 | WP_256878094.1 | IS21 family transposase ISSso4 | Transposase |
| PS039_RS24205 (124805) | 124805..125578 | - | 774 | WP_273775021.1 | UvrD-helicase domain-containing protein | - |
| PS039_RS24210 (125668) | 125668..126972 | + | 1305 | Protein_139 | ISL3 family transposase | - |
| PS039_RS24215 (127073) | 127073..127261 | + | 189 | Protein_140 | IS66 family transposase ISEc23 | Transposase |
| PS039_RS24220 (127474) | 127474..128514 | - | 1041 | WP_256878404.1 | IS481 family transposase ISErsp1 | Transposase |
| PS039_RS24225 (128609) | 128609..128824 | - | 216 | WP_256878405.1 | hypothetical protein | - |
| PS039_RS24230 (129107) | 129107..129569 | - | 463 | Protein_143 | integrase core domain-containing protein | - |
| PS039_RS24235 (129776) | 129776..129982 | + | 207 | Protein_144 | IS1 family transposase | - |
| PS039_RS24240 (130016) | 130016..132133 | - | 2118 | WP_256878406.1 | peptidase domain-containing ABC transporter | - |
| PS039_RS24245 (132133) | 132133..133353 | - | 1221 | WP_273775025.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| PS039_RS24250 (133953) | 133953..134525 | - | 573 | WP_256878408.1 | hypothetical protein | - |
| PS039_RS24255 (134699) | 134699..135354 | - | 656 | Protein_148 | IS1 family transposase IS1N | Transposase |
| PS039_RS24260 (135353) | 135353..135637 | - | 285 | Protein_149 | IS4 family transposase ISEc60 | Transposase |
| PS039_RS24265 (135988) | 135988..136245 | + | 258 | WP_256878409.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|