MGE detailed information
MGE type: Prophage MGE length: 52852 bp
Accession: NZ_CP117620 Location: 1787879..1840730 Organism: Escherichia albertii strain BIA_24 Replicon: chromosome
Accession: NZ_CP117620 Location: 1787879..1840730 Organism: Escherichia albertii strain BIA_24 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS039_RS08435 () | 1783787..1784986 | + | 1200 | WP_000284708.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| PS039_RS08440 () | 1784979..1785680 | + | 702 | WP_001059716.1 | lipoprotein-releasing ABC transporter ATP-binding protein LolD | - |
| PS039_RS08445 () | 1785680..1786924 | + | 1245 | WP_001251383.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| PS039_RS08450 () | 1786952..1787863 | + | 912 | WP_000291317.1 | N-acetylglucosamine kinase | - |
| PS039_RS08455 () | 1787879..1788700 | + | 822 | WP_273782198.1 | NAD-dependent protein deacylase | - |
| PS039_RS08460 () | 1788841..1789629 | - | 789 | Protein_1639 | TPM domain-containing protein | - |
| PS039_RS08465 () | 1789626..1790087 | - | 462 | WP_273810459.1 | DUF3592 domain-containing protein | - |
| PS039_RS08470 () | 1790145..1791191 | - | 1047 | WP_000759312.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| PS039_RS08475 () | 1791188..1791982 | - | 795 | WP_000580318.1 | spermidine/putrescine ABC transporter permease PotC | - |
| PS039_RS08480 () | 1792149..1793267 | - | 1119 | WP_059217629.1 | hypothetical protein ; Integrase | Integrase |
| PS039_RS08485 () | 1793236..1793505 | - | 270 | WP_000003742.1 | excisionase | - |
| PS039_RS08490 () | 1793567..1796032 | - | 2466 | WP_273810460.1 | exonuclease | - |
| PS039_RS08495 () | 1796125..1796315 | - | 191 | Protein_1646 | DUF1482 family protein | - |
| PS039_RS08500 () | 1796312..1796500 | - | 189 | WP_000449200.1 | cell division inhibition protein DicB | - |
| PS039_RS08505 () | 1797064..1797273 | + | 210 | WP_137651320.1 | hypothetical protein | - |
| PS039_RS08510 () | 1797274..1797912 | - | 639 | WP_059222115.1 | hypothetical protein | - |
| PS039_RS08515 () | 1797924..1798076 | - | 153 | WP_000379569.1 | DUF1391 family protein | - |
| PS039_RS08520 () | 1798393..1798869 | - | 477 | WP_059217914.1 | DNA-binding transcriptional repressor RacR | - |
| PS039_RS08525 () | 1798993..1799289 | + | 297 | WP_059217915.1 | toxin YdaS | - |
| PS039_RS08530 () | 1799312..1799737 | + | 426 | WP_059217916.1 | toxin YdaT family protein | - |
| PS039_RS08535 () | 1799761..1800693 | + | 933 | WP_273810461.1 | helix-turn-helix domain-containing protein | - |
| PS039_RS08540 () | 1800700..1801446 | + | 747 | WP_273810462.1 | ATP-binding protein | - |
| PS039_RS08545 () | 1801469..1802230 | + | 762 | WP_059217918.1 | DUF1627 domain-containing protein | - |
| PS039_RS08550 () | 1802238..1802648 | + | 411 | WP_137651310.1 | DUF977 family protein | - |
| PS039_RS08555 () | 1803005..1803778 | - | 774 | WP_059217920.1 | alpha/beta hydrolase | - |
| - | 1804313..1804371 | - | 59 | - | - | Antitoxin Detail |
| PS039_RS08560 () | 1804383..1804538 | + | 156 | WP_000813269.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| PS039_RS08565 () | 1804706..1804984 | + | 279 | WP_137651311.1 | hypothetical protein | - |
| PS039_RS08570 () | 1804986..1806041 | + | 1056 | WP_273810463.1 | DUF968 domain-containing protein | - |
| PS039_RS08575 () | 1806042..1806419 | + | 378 | Protein_1662 | RusA family crossover junction endodeoxyribonuclease | - |
| PS039_RS08580 () | 1806409..1806777 | + | 369 | WP_021526745.1 | antiterminator Q family protein | - |
| PS039_RS08585 () | 1806813..1807211 | - | 399 | WP_024190350.1 | hypothetical protein | - |
| PS039_RS08590 () | 1807201..1807464 | - | 264 | WP_021526743.1 | hypothetical protein | - |
| PS039_RS08595 () | 1807480..1808361 | - | 882 | WP_021526742.1 | hypothetical protein | - |
| PS039_RS08620 () | 1809259..1809336 | + | 78 | Protein_1667 | phage holin | - |
| PS039_RS08625 () | 1809886..1810092 | + | 207 | WP_137651312.1 | class II holin family protein | - |
| PS039_RS08630 () | 1810096..1810437 | + | 342 | WP_137651313.1 | YdfR family protein | - |
| PS039_RS08635 () | 1810406..1810678 | - | 273 | WP_059217952.1 | hypothetical protein | - |
| PS039_RS08640 () | 1810784..1811317 | + | 534 | WP_273810464.1 | lysozyme | - |
| PS039_RS08645 () | 1811834..1812040 | + | 207 | WP_123057736.1 | lysis system o-spanin lipoprotein Rz1 | - |
| PS039_RS08650 () | 1812231..1812848 | + | 618 | WP_273810465.1 | Rha family transcriptional regulator | - |
| PS039_RS08655 () | 1813342..1813887 | + | 546 | WP_000453587.1 | DNA-packaging protein | - |
| PS039_RS08660 () | 1813862..1815787 | + | 1926 | WP_273810466.1 | phage terminase large subunit family protein | - |
| PS039_RS08665 () | 1815784..1815990 | + | 207 | WP_000198149.1 | gpW family protein | - |
| PS039_RS08670 () | 1815987..1817588 | + | 1602 | WP_273810467.1 | phage portal protein | - |
| PS039_RS08675 () | 1817569..1818900 | + | 1332 | WP_273810468.1 | S49 family peptidase | - |
| PS039_RS08680 () | 1818910..1819242 | + | 333 | WP_033548197.1 | head decoration protein | - |
| PS039_RS08685 () | 1819298..1820323 | + | 1026 | WP_273810469.1 | major capsid protein | - |
| PS039_RS08690 () | 1820365..1820751 | + | 387 | WP_273810470.1 | DNA-packaging protein FI | - |
| PS039_RS08695 () | 1820763..1821116 | + | 354 | WP_000752994.1 | head-tail joining protein | - |
| PS039_RS08700 () | 1821128..1821706 | + | 579 | WP_045903848.1 | phage tail protein | - |
| PS039_RS08705 () | 1821703..1822098 | + | 396 | WP_000683141.1 | phage minor tail U family protein | - |
| PS039_RS08710 () | 1822106..1822846 | + | 741 | WP_059274995.1 | phage tail protein | - |
| PS039_RS08715 () | 1822862..1823284 | + | 423 | WP_032329098.1 | phage minor tail protein G | - |
| PS039_RS08720 () | 1823266..1823691 | + | 426 | WP_273810471.1 | phage tail assembly protein T | - |
| PS039_RS08725 () | 1823684..1826245 | + | 2562 | WP_273810472.1 | phage tail tape measure protein | - |
| PS039_RS08730 () | 1826242..1826571 | + | 330 | WP_001543782.1 | phage tail protein | - |
| PS039_RS08735 () | 1826571..1827269 | + | 699 | WP_137652057.1 | phage minor tail protein L | - |
| PS039_RS08740 () | 1827417..1828436 | + | 1020 | WP_137653597.1 | IS110 family transposase ISEc66 | Transposase |
| PS039_RS08745 () | 1828717..1829460 | + | 744 | WP_273810473.1 | C40 family peptidase | - |
| PS039_RS08750 () | 1829457..1830029 | + | 573 | WP_273807090.1 | tail assembly protein | - |
| PS039_RS08755 () | 1830090..1833503 | + | 3414 | WP_273810474.1 | host specificity protein J | - |
| PS039_RS08760 () | 1833573..1834172 | + | 600 | WP_273810475.1 | Outer membrane protein X | VF |
| PS039_RS08765 () | 1834237..1835550 | + | 1314 | WP_273810476.1 | ISNCY family transposase KIS | Transposase |
| PS039_RS08770 () | 1835552..1835821 | + | 270 | WP_273810477.1 | phage tail fiber C-terminal domain-containing protein | - |
| PS039_RS08775 () | 1835989..1837217 | + | 1229 | WP_273810478.1 | IS3 family transposase IS2 | Transposase |
| PS039_RS08780 () | 1837412..1838047 | + | 636 | WP_273810479.1 | hypothetical protein | VF |
| PS039_RS08785 () | 1838173..1839229 | - | 1057 | Protein_1700 | hypothetical protein | VF |
| PS039_RS08790 () | 1839330..1839956 | - | 627 | WP_273810480.1 | hypothetical protein | VF |
| PS039_RS08795 () | 1840140..1840730 | + | 591 | WP_273810481.1 | hypothetical protein | VF |
| PS039_RS08800 () | 1840753..1840838 | - | 86 | Protein_1703 | YkgJ family cysteine cluster protein | - |
| PS039_RS08805 () | 1840965..1841114 | + | 150 | Protein_1704 | tail fiber assembly protein | - |
| PS039_RS08810 () | 1841347..1842210 | - | 864 | WP_059217927.1 | spermidine/putrescine ABC transporter permease PotB | - |
| PS039_RS08815 () | 1842194..1843330 | - | 1137 | WP_273810482.1 | spermidine/putrescine ABC transporter ATP-binding protein PotA | - |
| PS039_RS08820 () | 1843580..1844809 | + | 1230 | WP_000359426.1 | peptidase T | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|