MGE detailed information
MGE type: Conjugative plasmid MGE length: 96063 bp
Accession: NZ_CP117617 Location: 1..96063 Organism: Escherichia albertii strain BIA_25 Replicon: plasmid pEA25_2
Accession: NZ_CP117617 Location: 1..96063 Organism: Escherichia albertii strain BIA_25 Replicon: plasmid pEA25_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS046_RS23815 (1) | 1..858 | + | 858 | WP_273810623.1 | incFII family plasmid replication initiator RepA | - |
| PS046_RS23820 (1767) | 1767..1904 | + | 138 | Protein_1 | XRE family transcriptional regulator | - |
| PS046_RS23825 (1924) | 1924..2187 | + | 264 | WP_001089474.1 | hypothetical protein | - |
| PS046_RS23830 (2177) | 2177..2476 | + | 300 | WP_000119542.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PS046_RS23835 (2935) | 2935..4677 | - | 1743 | WP_001513513.1 | ABC transporter ATP-binding protein | - |
| PS046_RS23840 (4680) | 4680..6221 | - | 1542 | WP_273810624.1 | lasso peptide isopeptide bond-forming cyclase | - |
| PS046_RS23845 (6224) | 6224..6850 | - | 627 | WP_001513515.1 | lasso peptide biosynthesis B2 protein | - |
| PS046_RS23850 (7189) | 7189..7365 | + | 177 | WP_001513516.1 | lasso peptide microcin J25 | - |
| PS046_RS23855 (7586) | 7586..7681 | - | 96 | WP_000609144.1 | DinQ-like type I toxin DqlB | - |
| PS046_RS23860 (8181) | 8181..8450 | + | 270 | WP_242795561.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PS046_RS23865 (8808) | 8808..9083 | + | 276 | WP_000877662.1 | bacteriocin immunity protein | - |
| PS046_RS23870 (9161) | 9161..10348 | - | 1188 | WP_025999368.1 | MFS transporter | - |
| PS046_RS23875 (10405) | 10405..11166 | - | 762 | WP_000020504.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| PS046_RS23880 (11166) | 11166..12203 | - | 1038 | WP_032241771.1 | Hemin transport system permease protein HmuU | VF |
| PS046_RS23885 (12203) | 12203..13201 | - | 999 | WP_004175650.1 | ABC transporter substrate-binding protein | - |
| PS046_RS23890 (13351) | 13351..13455 | - | 105 | Protein_15 | integrase core domain-containing protein | - |
| PS046_RS23895 (13545) | 13545..13970 | + | 426 | WP_032279819.1 | IS66 family transposase ISEc23 | Transposase |
| PS046_RS23900 (13967) | 13967..14317 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| PS046_RS23905 (14348) | 14348..15961 | + | 1614 | WP_075211705.1 | IS66 family transposase ISEc23 | Transposase |
| PS046_RS23910 (16359) | 16359..16946 | + | 588 | WP_032280144.1 | serine acetyltransferase | - |
| PS046_RS23915 (17228) | 17228..17821 | - | 594 | WP_032280163.1 | ProQ/FINO family protein | - |
| PS046_RS23920 (17940) | 17940..18197 | - | 258 | WP_075207891.1 | hypothetical protein | - |
| PS046_RS23925 (18319) | 18319..18909 | - | 591 | WP_032280054.1 | hypothetical protein | - |
| PS046_RS23930 (18909) | 18909..19142 | - | 234 | WP_032280055.1 | hypothetical protein | - |
| PS046_RS23935 (19471) | 19471..19923 | + | 453 | WP_000670960.1 | acyltransferase | - |
| PS046_RS23940 (19955) | 19955..20608 | - | 654 | WP_260834564.1 | hypothetical protein | - |
| PS046_RS23945 (20685) | 20685..22256 | - | 1572 | WP_273811869.1 | IS66 family transposase ISCro1 | Transposase |
| PS046_RS23950 (22276) | 22276..22623 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| PS046_RS23955 (22623) | 22623..23300 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| PS046_RS23960 (23337) | 23337..24194 | - | 858 | WP_273813386.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| PS046_RS23965 (24286) | 24286..24963 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| PS046_RS23970 (24963) | 24963..25310 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| PS046_RS23975 (25330) | 25330..26901 | + | 1572 | WP_273811898.1 | IS66 family transposase ISCro1 | Transposase |
| PS046_RS23980 (26928) | 26928..27167 | - | 240 | WP_273813389.1 | SemiSWEET transporter | - |
| PS046_RS23985 (27169) | 27169..28185 | - | 1017 | WP_032280058.1 | Gfo/Idh/MocA family oxidoreductase | - |
| PS046_RS23990 (28188) | 28188..29015 | - | 828 | WP_000154003.1 | HAD-IIB family hydrolase | - |
| PS046_RS23995 (28999) | 28999..30237 | - | 1239 | WP_012006540.1 | 3-oxo-glucose-6-phosphate:glutamate aminotransferase | VF |
| PS046_RS24000 (30777) | 30777..31910 | + | 1134 | WP_126755948.1 | DUF3800 domain-containing protein | - |
| PS046_RS24005 (31930) | 31930..32214 | + | 285 | WP_000642771.1 | hypothetical protein | - |
| PS046_RS24010 (32211) | 32211..32408 | - | 198 | WP_000215657.1 | hypothetical protein | - |
| PS046_RS24015 (33013) | 33013..33426 | + | 414 | WP_000465040.1 | hypothetical protein | - |
| PS046_RS24020 (33428) | 33428..34210 | + | 783 | WP_021533580.1 | site-specific integrase | - |
| PS046_RS24025 (34382) | 34382..35137 | - | 756 | WP_001282649.1 | IS21 family transposase ISSso4 | Transposase |
| PS046_RS24030 (35154) | 35154..36689 | - | 1536 | WP_256878094.1 | IS21 family transposase ISSso4 | Transposase |
| PS046_RS24035 (37028) | 37028..37381 | + | 354 | WP_000864812.1 | colicin M immunity protein | - |
| PS046_RS24040 (37431) | 37431..38246 | - | 816 | WP_000449473.1 | lipid II-degrading bacteriocin colicin M | - |
| PS046_RS24045 (38489) | 38489..39016 | + | 528 | WP_273810645.1 | colicin B immunity protein | - |
| PS046_RS24050 (39034) | 39034..39975 | - | 942 | Protein_47 | colicin-like bacteriocin tRNase domain-containing protein | - |
| PS046_RS24055 (40031) | 40031..40728 | + | 698 | WP_094096600.1 | IS1 family transposase IS1A | Transposase |
| PS046_RS24060 (41108) | 41108..41458 | - | 351 | WP_273810647.1 | plasmid partitioning/stability family protein | - |
| PS046_RS24065 (41461) | 41461..42423 | - | 963 | WP_000959880.1 | plasmid segregation protein ParM | - |
| PS046_RS24070 (42571) | 42571..42864 | + | 294 | WP_273813396.1 | hypothetical protein | - |
| PS046_RS24075 (42941) | 42941..43624 | + | 684 | WP_000085940.1 | DNA methylase | - |
| PS046_RS24080 (43625) | 43625..43846 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| PS046_RS24085 (43776) | 43776..44294 | + | 519 | WP_223174655.1 | DUF1380 family protein | - |
| PS046_RS24090 (44339) | 44339..45109 | + | 771 | WP_001006200.1 | hypothetical protein | - |
| PS046_RS24095 (45212) | 45212..46402 | + | 1191 | WP_273783690.1 | IS4 family transposase ISEc60 | Transposase |
| PS046_RS24100 (46826) | 46826..47251 | + | 426 | WP_024214837.1 | antirestriction protein | - |
| PS046_RS24105 (47298) | 47298..47720 | + | 423 | WP_001587500.1 | DUF1380 family protein | - |
| PS046_RS24110 (47717) | 47717..47908 | + | 192 | WP_106668543.1 | hypothetical protein | - |
| PS046_RS24115 (48946) | 48946..49176 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| PS046_RS24120 (49228) | 49228..50589 | + | 1362 | WP_001825120.1 | DUF3560 domain-containing protein | - |
| PS046_RS24125 (50637) | 50637..51200 | + | 564 | WP_256878427.1 | class I SAM-dependent methyltransferase | - |
| PS046_RS24130 (51197) | 51197..51415 | + | 219 | WP_071588970.1 | hypothetical protein | - |
| PS046_RS24135 (51352) | 51352..51585 | + | 234 | WP_071588969.1 | hypothetical protein | - |
| PS046_RS24140 (51826) | 51826..52086 | + | 261 | WP_042046747.1 | hypothetical protein | - |
| PS046_RS24145 (52203) | 52203..53189 | - | 987 | WP_273810655.1 | IS110 family transposase IS1663 | Transposase |
| PS046_RS24155 (54770) | 54770..55057 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| PS046_RS24160 (55175) | 55175..55996 | + | 822 | WP_001234426.1 | DUF932 domain-containing protein | - |
| PS046_RS24165 (56293) | 56293..56940 | - | 648 | WP_155953419.1 | hypothetical protein | VF |
| PS046_RS24170 (57216) | 57216..57599 | + | 384 | WP_001151530.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| PS046_RS24175 (57791) | 57791..58438 | + | 648 | WP_096040777.1 | transcriptional regulator TraJ family protein | - |
| PS046_RS24180 (58558) | 58558..58785 | + | 228 | WP_000589558.1 | conjugal transfer relaxosome protein TraY | - |
| PS046_RS24185 (58819) | 58819..59211 | + | 393 | WP_024127870.1 | type IV conjugative transfer system pilin TraA | - |
| PS046_RS24190 (59226) | 59226..59537 | + | 312 | WP_001585108.1 | type IV conjugative transfer system protein TraL | - |
| PS046_RS24195 (59559) | 59559..60125 | + | 567 | WP_059259957.1 | type IV conjugative transfer system protein TraE | - |
| PS046_RS24200 (60138) | 60138..60839 | + | 702 | WP_273813362.1 | type-F conjugative transfer system secretin TraK | - |
| PS046_RS24205 (60839) | 60839..62266 | + | 1428 | WP_273813366.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| PS046_RS24210 (62256) | 62256..62846 | + | 591 | WP_001376242.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| PS046_RS24215 (62833) | 62833..63030 | + | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
| PS046_RS24220 (63043) | 63043..63294 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| PS046_RS24225 (63291) | 63291..63806 | + | 516 | WP_016241856.1 | type IV conjugative transfer system lipoprotein TraV | - |
| PS046_RS24230 (63941) | 63941..64162 | + | 222 | WP_001278685.1 | conjugal transfer protein TraR | - |
| PS046_RS24235 (64322) | 64322..66949 | + | 2628 | WP_181668576.1 | type IV secretion system protein TraC | - |
| PS046_RS24240 (66946) | 66946..67332 | + | 387 | WP_181668575.1 | type-F conjugative transfer system protein TrbI | - |
| PS046_RS24245 (67329) | 67329..67961 | + | 633 | WP_001203749.1 | type-F conjugative transfer system protein TraW | - |
| PS046_RS24250 (67958) | 67958..68950 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| PS046_RS24255 (68976) | 68976..69440 | + | 465 | WP_096948751.1 | hypothetical protein | - |
| PS046_RS24260 (69451) | 69451..69766 | + | 316 | Protein_89 | hypothetical protein | - |
| PS046_RS24265 (69759) | 69759..70211 | + | 453 | WP_001349502.1 | hypothetical protein | - |
| PS046_RS24270 (70239) | 70239..70877 | + | 639 | WP_273810593.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| PS046_RS24275 (70874) | 70874..72682 | + | 1809 | WP_042973378.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| PS046_RS24280 (72709) | 72709..72966 | + | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| PS046_RS24285 (72959) | 72959..73702 | + | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| PS046_RS24290 (73718) | 73718..74065 | + | 348 | WP_042973381.1 | conjugal transfer protein TrbA | - |
| PS046_RS24295 (74067) | 74067..74381 | - | 315 | WP_000415566.1 | protein ArtA | - |
| PS046_RS24300 (74462) | 74462..74746 | + | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| PS046_RS24305 (74733) | 74733..75278 | + | 546 | WP_000059833.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| PS046_RS24310 (75208) | 75208..75570 | + | 363 | WP_174491168.1 | P-type conjugative transfer protein TrbJ | - |
| PS046_RS24315 (75570) | 75570..76943 | + | 1374 | WP_001137358.1 | conjugal transfer pilus assembly protein TraH | - |
| PS046_RS24320 (76940) | 76940..79762 | + | 2823 | WP_001007026.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| PS046_RS24325 (79777) | 79777..80202 | + | 426 | WP_273813374.1 | surface exclusion protein | - |
| PS046_RS24330 (80317) | 80317..81858 | + | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| PS046_RS24335 (81873) | 81873..82619 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| PS046_RS24340 (82756) | 82756..82866 | + | 111 | WP_273813397.1 | hypothetical protein | - |
| PS046_RS24345 (82898) | 82898..83629 | + | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| PS046_RS24350 (83881) | 83881..86034 | + | 2154 | WP_273813376.1 | type IV conjugative transfer system coupling protein TraD | - |
| PS046_RS24355 (86034) | 86034..91304 | + | 5271 | WP_273813378.1 | Multifunctional conjugation protein TraI | Relaxase |
| PS046_RS24360 (91324) | 91324..92064 | + | 741 | WP_273813380.1 | conjugal transfer pilus acetylase TraX | - |
| PS046_RS24365 (92119) | 92119..92679 | + | 561 | WP_273813382.1 | fertility inhibition protein FinO | - |
| PS046_RS24370 (92815) | 92815..93027 | + | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| PS046_RS24375 (93273) | 93273..93734 | + | 462 | WP_000978818.1 | thermonuclease family protein | - |
| PS046_RS24380 (93780) | 93780..93989 | + | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| PS046_RS24385 (94183) | 94183..94593 | + | 411 | WP_273810621.1 | hypothetical protein | - |
| - (94964) | 94964..95025 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (94964) | 94964..95025 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (94964) | 94964..95025 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (94964) | 94964..95025 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| PS046_RS24390 (95069) | 95069..95218 | + | 150 | WP_001336447.1 | Hok/Gef family protein | Toxin Detail |
| PS046_RS24395 (95502) | 95502..95762 | + | 261 | WP_021536205.1 | replication regulatory protein RepA | - |
| PS046_RS24400 (95866) | 95866..96051 | + | 186 | WP_273810622.1 | plasmid copy control protein CopA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|