MGE detailed information
MGE type: Prophage MGE length: 62269 bp
Accession: NZ_CP117609 Location: 4227316..4289584 Organism: Escherichia albertii strain BIA_26 Replicon: chromosome
Accession: NZ_CP117609 Location: 4227316..4289584 Organism: Escherichia albertii strain BIA_26 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS038_RS20165 (4224737) | 4224737..4225930 | - | 1194 | WP_044709161.1 | aromatic amino acid transaminase | - |
| PS038_RS20170 (4226184) | 4226184..4227263 | - | 1080 | WP_001147294.1 | alanine racemase | - |
| PS038_RS20175 (4227316) | 4227316..4228731 | - | 1416 | WP_000918357.1 | replicative DNA helicase | - |
| PS038_RS20180 (4228814) | 4228814..4229797 | + | 984 | WP_000235499.1 | L-threonine 3-dehydrogenase | VF |
| PS038_RS20185 (4229962) | 4229962..4230204 | - | 243 | WP_000891397.1 | envelope stress response protein PspG | - |
| PS038_RS20190 (4230339) | 4230339..4231376 | - | 1038 | WP_273818189.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| PS038_RS20195 (4231465) | 4231465..4232562 | + | 1098 | WP_000332269.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PS038_RS20200 (4232624) | 4232624..4232872 | + | 249 | WP_001217541.1 | DinI-like family protein | - |
| PS038_RS20205 (4233033) | 4233033..4233602 | - | 570 | Protein_3950 | hypothetical protein | VF |
| PS038_RS20215 (4234933) | 4234933..4235010 | - | 78 | Protein_3952 | T3SS effector NleG | - |
| PS038_RS20220 (4235092) | 4235092..4235721 | - | 630 | WP_273818192.1 | hypothetical protein | VF |
| PS038_RS20225 (4235794) | 4235794..4236366 | - | 573 | WP_273818193.1 | hypothetical protein | VF |
| PS038_RS20230 (4236399) | 4236399..4236476 | - | 78 | Protein_3955 | tail assembly protein | - |
| PS038_RS20235 (4236478) | 4236478..4236747 | - | 270 | WP_191643998.1 | phage tail fiber C-terminal domain-containing protein | - |
| PS038_RS20240 (4236749) | 4236749..4238062 | - | 1314 | WP_273818195.1 | ISNCY family transposase KIS | Transposase |
| PS038_RS20245 (4238127) | 4238127..4238726 | - | 600 | WP_273818196.1 | hypothetical protein | VF |
| PS038_RS20250 (4238794) | 4238794..4242189 | - | 3396 | WP_273818197.1 | host specificity protein J | - |
| PS038_RS20255 (4242250) | 4242250..4242822 | - | 573 | WP_273818293.1 | tail assembly protein | - |
| PS038_RS20260 (4242819) | 4242819..4243562 | - | 744 | WP_065228166.1 | C40 family peptidase | - |
| PS038_RS20265 (4243568) | 4243568..4244266 | - | 699 | WP_001152619.1 | phage minor tail protein L | - |
| PS038_RS20270 (4244266) | 4244266..4244595 | - | 330 | WP_000847332.1 | phage tail protein | - |
| PS038_RS20275 (4244592) | 4244592..4247141 | - | 2550 | WP_137523246.1 | phage tail tape measure protein | - |
| PS038_RS20280 (4247134) | 4247134..4247568 | - | 435 | WP_001605279.1 | phage tail assembly protein T | - |
| PS038_RS20285 (4247550) | 4247550..4247963 | - | 414 | WP_273818199.1 | phage minor tail protein G | - |
| PS038_RS20290 (4247979) | 4247979..4248719 | - | 741 | WP_024222982.1 | phage tail protein | - |
| PS038_RS20295 (4248727) | 4248727..4249122 | - | 396 | WP_273818200.1 | phage minor tail U family protein | - |
| PS038_RS20300 (4249119) | 4249119..4249697 | - | 579 | WP_273818201.1 | phage tail protein | - |
| PS038_RS20305 (4249709) | 4249709..4250062 | - | 354 | WP_021559793.1 | head-tail joining protein | - |
| PS038_RS20310 (4250074) | 4250074..4250469 | - | 396 | WP_273818202.1 | DNA-packaging protein FI | - |
| PS038_RS20315 (4250511) | 4250511..4251536 | - | 1026 | WP_000063265.1 | major capsid protein | - |
| PS038_RS20320 (4251592) | 4251592..4251924 | - | 333 | WP_273818204.1 | head decoration protein | - |
| PS038_RS20325 (4251934) | 4251934..4253253 | - | 1320 | WP_273818205.1 | S49 family peptidase | - |
| PS038_RS20330 (4253234) | 4253234..4254835 | - | 1602 | WP_001367714.1 | phage portal protein | - |
| PS038_RS20335 (4254832) | 4254832..4255038 | - | 207 | WP_000198149.1 | gpW family protein | - |
| PS038_RS20340 (4255035) | 4255035..4256960 | - | 1926 | WP_273818207.1 | phage terminase large subunit family protein | - |
| PS038_RS20345 (4256935) | 4256935..4257480 | - | 546 | WP_000453587.1 | DNA-packaging protein | - |
| PS038_RS20350 (4257869) | 4257869..4258063 | + | 195 | WP_001443307.1 | YlcI/YnfO family protein | - |
| PS038_RS20355 (4258251) | 4258251..4258868 | - | 618 | WP_000881324.1 | Rha family transcriptional regulator | - |
| PS038_RS20360 (4259018) | 4259018..4259455 | - | 438 | WP_273818208.1 | lysis protein | - |
| PS038_RS20365 (4259452) | 4259452..4259985 | - | 534 | WP_059242542.1 | lysozyme | - |
| PS038_RS20370 (4260091) | 4260091..4260363 | + | 273 | WP_001315200.1 | hypothetical protein | - |
| PS038_RS20375 (4260329) | 4260329..4260673 | - | 345 | WP_032330228.1 | YdfR family protein | - |
| PS038_RS20380 (4260678) | 4260678..4260893 | - | 216 | WP_001382056.1 | class II holin family protein | - |
| PS038_RS20385 (4261115) | 4261115..4262965 | - | 1851 | WP_150003659.1 | DUF1737 domain-containing protein | - |
| PS038_RS20390 (4262985) | 4262985..4263062 | - | 78 | Protein_3987 | phage holin | - |
| PS038_RS20395 (4263130) | 4263130..4264182 | - | 1053 | WP_052933319.1 | site-specific DNA-methyltransferase | - |
| PS038_RS20400 (4264333) | 4264333..4264536 | - | 204 | WP_000917724.1 | hypothetical protein | - |
| PS038_RS20405 (4264789) | 4264789..4265541 | - | 753 | WP_029594008.1 | antitermination protein | - |
| PS038_RS20410 (4265555) | 4265555..4266544 | - | 990 | WP_273818209.1 | DUF968 domain-containing protein | - |
| PS038_RS20415 (4266552) | 4266552..4267361 | - | 810 | WP_001061445.1 | KilA-N domain-containing protein | - |
| PS038_RS20420 (4267381) | 4267381..4267770 | - | 390 | WP_112875663.1 | RusA family crossover junction endodeoxyribonuclease | - |
| PS038_RS20425 (4267767) | 4267767..4268093 | - | 327 | WP_000210187.1 | LexA family transcriptional regulator | - |
| PS038_RS20430 (4268090) | 4268090..4268743 | - | 654 | WP_000066917.1 | phage N-6-adenine-methyltransferase | - |
| PS038_RS20435 (4268743) | 4268743..4269237 | - | 495 | WP_273818210.1 | PerC family transcriptional regulator | - |
| PS038_RS20440 (4269234) | 4269234..4270175 | - | 942 | WP_273818211.1 | helix-turn-helix domain-containing protein | - |
| PS038_RS20445 (4270165) | 4270165..4270344 | - | 180 | WP_001188051.1 | DUF4222 domain-containing protein | - |
| PS038_RS20450 (4270520) | 4270520..4271104 | - | 585 | WP_000514174.1 | YmfL family putative regulatory protein | - |
| PS038_RS20455 (4271132) | 4271132..4271329 | - | 198 | WP_001231956.1 | Cro/CI family transcriptional regulator | - |
| PS038_RS20460 (4271425) | 4271425..4272078 | + | 654 | WP_000981537.1 | S24 family peptidase | - |
| PS038_RS20465 (4272536) | 4272536..4272898 | + | 363 | WP_000135680.1 | protein YfdP | - |
| PS038_RS20470 (4272964) | 4272964..4273788 | + | 825 | WP_000081280.1 | DUF2303 family protein | - |
| PS038_RS20475 (4273917) | 4273917..4274453 | + | 537 | WP_021563903.1 | 5'-deoxynucleotidase | - |
| PS038_RS20480 (4274444) | 4274444..4274794 | + | 351 | WP_001530592.1 | hypothetical protein | - |
| PS038_RS20485 (4274978) | 4274978..4275154 | + | 177 | WP_273818212.1 | hypothetical protein | - |
| PS038_RS20490 (4275151) | 4275151..4275339 | + | 189 | WP_273818213.1 | hypothetical protein | - |
| PS038_RS20495 (4275341) | 4275341..4275519 | + | 179 | Protein_4008 | hypothetical protein | - |
| PS038_RS20500 (4275816) | 4275816..4277435 | - | 1620 | WP_273818010.1 | ISL3 family transposase ISEc38 | Transposase |
| PS038_RS20505 (4277551) | 4277551..4278333 | - | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| PS038_RS20510 (4278330) | 4278330..4279352 | - | 1023 | WP_000255944.1 | IS21 family transposase IS100kyp | Transposase |
| PS038_RS20515 (4279543) | 4279543..4280109 | + | 567 | WP_273818214.1 | DUF551 domain-containing protein | - |
| PS038_RS20520 (4280109) | 4280109..4280681 | + | 573 | WP_273818294.1 | 3'-5' exonuclease | - |
| PS038_RS20525 (4280718) | 4280718..4280990 | + | 273 | WP_024237202.1 | pyocin activator PrtN family protein | - |
| PS038_RS20530 (4281024) | 4281024..4281572 | - | 549 | WP_053878051.1 | hypothetical protein | Toxin Detail |
| PS038_RS20535 (4281595) | 4281595..4282068 | - | 474 | WP_059242328.1 | DUF4065 domain-containing protein | Antitoxin Detail |
| PS038_RS20540 (4282591) | 4282591..4283106 | + | 516 | WP_002460756.1 | zinc uptake transcriptional repressor Zur | - |
| PS038_RS20545 (4283147) | 4283147..4283356 | - | 210 | WP_001030604.1 | CsbD family protein | - |
| PS038_RS20550 (4283472) | 4283472..4284797 | - | 1326 | WP_059218964.1 | MATE family efflux transporter DinF | - |
| PS038_RS20555 (4284872) | 4284872..4285480 | - | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| PS038_RS20560 (4285590) | 4285590..4285958 | - | 369 | WP_000002912.1 | diacylglycerol kinase | - |
| PS038_RS20565 (4286128) | 4286128..4288551 | + | 2424 | WP_054412939.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| PS038_RS20570 (4288712) | 4288712..4289584 | - | 873 | WP_000455238.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| PS038_RS20575 (4289597) | 4289597..4290094 | - | 498 | WP_000019225.1 | chorismate lyase | - |
| PS038_RS20580 (4290273) | 4290273..4291193 | - | 921 | WP_010341863.1 | maltose operon protein MalM | - |
| PS038_RS20585 (4291425) | 4291425..4292765 | - | 1341 | WP_000973652.1 | maltoporin LamB | - |
| PS038_RS20590 (4292836) | 4292836..4293951 | - | 1116 | WP_000179166.1 | maltose/maltodextrin ABC transporter ATP-binding protein MalK | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|