MGE detailed information
MGE type: Conjugative plasmid MGE length: 81187 bp
Accession: NZ_CP117603 Location: 1..81187 Organism: Escherichia albertii strain BIA_32 Replicon: plasmid pEA32_3
Accession: NZ_CP117603 Location: 1..81187 Organism: Escherichia albertii strain BIA_32 Replicon: plasmid pEA32_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS047_RS25145 (1) | 1..858 | + | 858 | WP_273823901.1 | incFII family plasmid replication initiator RepA | - |
| PS047_RS25150 (1798) | 1798..2127 | + | 330 | WP_086258293.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PS047_RS25155 (2108) | 2108..2389 | + | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| PS047_RS25160 (2488) | 2488..3348 | - | 861 | Protein_4 | IS3 family transposase | - |
| PS047_RS25165 (3404) | 3404..4206 | + | 803 | Protein_5 | transposase | - |
| PS047_RS25170 (4224) | 4224..4802 | - | 579 | WP_059236323.1 | hypothetical protein | VF |
| PS047_RS25175 (5427) | 5427..7550 | - | 2124 | WP_175072543.1 | peptidase domain-containing ABC transporter | - |
| PS047_RS25180 (7550) | 7550..8770 | - | 1221 | WP_175072544.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| PS047_RS25185 (9385) | 9385..9957 | - | 573 | WP_059236318.1 | hypothetical protein | - |
| PS047_RS25190 (10214) | 10214..11135 | + | 922 | Protein_10 | DDE-type integrase/transposase/recombinase | - |
| PS047_RS25195 (11739) | 11739..12224 | - | 486 | WP_175072545.1 | heme-binding protein | - |
| PS047_RS25200 (12278) | 12278..13782 | + | 1505 | Protein_12 | amidohydrolase | - |
| PS047_RS25205 (14044) | 14044..14151 | + | 108 | Protein_13 | hypothetical protein | - |
| PS047_RS25210 (14771) | 14771..15304 | - | 534 | Protein_14 | transposase | - |
| PS047_RS25215 (15640) | 15640..19779 | + | 4140 | WP_175072546.1 | Hemoglobin-binding protease hbp autotransporter | VF |
| PS047_RS25220 (19902) | 19902..20484 | + | 583 | Protein_16 | ISL3 family transposase | - |
| PS047_RS25225 (20583) | 20583..20783 | + | 201 | Protein_17 | transposase | - |
| PS047_RS25235 (22586) | 22586..22804 | + | 219 | WP_000813639.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| PS047_RS25240 (22806) | 22806..23111 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| PS047_RS25245 (23112) | 23112..23918 | + | 807 | WP_273823988.1 | site-specific integrase | - |
| PS047_RS25250 (24098) | 24098..24742 | + | 645 | WP_001144035.1 | ParA family protein | - |
| PS047_RS25255 (24829) | 24829..25152 | + | 324 | WP_273823990.1 | molecular chaperone GroEL | - |
| PS047_RS25260 (25577) | 25577..26557 | + | 981 | WP_273823992.1 | plasmid segregation protein ParM | - |
| PS047_RS25265 (26550) | 26550..26966 | + | 417 | WP_273823994.1 | plasmid partitioning/stability family protein | - |
| PS047_RS25270 (26968) | 26968..28231 | - | 1264 | Protein_26 | translesion error-prone DNA polymerase V subunit UmuC | - |
| PS047_RS25275 (28231) | 28231..28668 | - | 438 | WP_273823995.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PS047_RS25280 (28665) | 28665..28913 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| PS047_RS25285 (29133) | 29133..29936 | + | 804 | Protein_29 | DUF1281 domain-containing protein | - |
| PS047_RS25290 (29933) | 29933..30244 | + | 312 | WP_273823996.1 | hypothetical protein | - |
| PS047_RS25295 (30320) | 30320..31003 | + | 684 | WP_268597467.1 | DNA methylase | - |
| PS047_RS25300 (31004) | 31004..31225 | + | 222 | WP_273823998.1 | hypothetical protein | - |
| PS047_RS25305 (31206) | 31206..31672 | + | 467 | Protein_33 | DUF1380 family protein | - |
| PS047_RS25310 (31717) | 31717..32493 | + | 777 | WP_273823999.1 | hypothetical protein | - |
| PS047_RS25315 (32906) | 32906..33331 | + | 426 | WP_096961372.1 | antirestriction protein | - |
| PS047_RS25320 (33378) | 33378..33800 | + | 423 | WP_273824002.1 | hypothetical protein | - |
| PS047_RS25325 (33797) | 33797..33988 | + | 192 | WP_096964308.1 | hypothetical protein | - |
| PS047_RS25330 (34199) | 34199..34453 | - | 255 | Protein_38 | hypothetical protein | - |
| PS047_RS25335 (34970) | 34970..35200 | + | 231 | WP_096961404.1 | hypothetical protein | - |
| PS047_RS25340 (35252) | 35252..36613 | + | 1362 | WP_273824004.1 | DUF3560 domain-containing protein | - |
| PS047_RS25345 (36660) | 36660..37223 | + | 564 | WP_096037668.1 | class I SAM-dependent methyltransferase | - |
| PS047_RS25350 (37309) | 37309..37758 | - | 450 | WP_273824008.1 | hypothetical protein | - |
| PS047_RS25355 (38060) | 38060..38587 | + | 528 | WP_273824009.1 | single-stranded DNA-binding protein | - |
| PS047_RS25360 (38645) | 38645..38878 | + | 234 | WP_023181060.1 | DUF905 family protein | - |
| PS047_RS25365 (38942) | 38942..40900 | + | 1959 | WP_273824011.1 | ParB/RepB/Spo0J family partition protein | - |
| PS047_RS25370 (40955) | 40955..41389 | + | 435 | WP_053001960.1 | conjugation system SOS inhibitor PsiB | - |
| PS047_RS25375 (41386) | 41386..42123 | + | 738 | Protein_47 | plasmid SOS inhibition protein A | - |
| - (42094) | 42094..42309 | + | 216 | NuclAT_0 | - | - |
| - (42094) | 42094..42309 | + | 216 | NuclAT_0 | - | - |
| - (42094) | 42094..42309 | + | 216 | NuclAT_0 | - | - |
| - (42094) | 42094..42309 | + | 216 | NuclAT_0 | - | - |
| PS047_RS25380 (42297) | 42297..42449 | + | 153 | Protein_48 | DUF5431 family protein | - |
| PS047_RS25385 (42394) | 42394..42516 | + | 123 | WP_223200913.1 | Hok/Gef family protein | - |
| PS047_RS25390 (42823) | 42823..43119 | - | 297 | Protein_50 | hypothetical protein | - |
| PS047_RS25395 (43420) | 43420..43707 | + | 288 | Protein_51 | hypothetical protein | - |
| PS047_RS25400 (43829) | 43829..44650 | + | 822 | Protein_52 | DUF932 domain-containing protein | - |
| PS047_RS25405 (44946) | 44946..45548 | - | 603 | WP_000243701.1 | hypothetical protein | VF |
| PS047_RS25410 (45848) | 45848..46231 | + | 384 | WP_149450799.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| PS047_RS25415 (46422) | 46422..47108 | + | 687 | WP_273823913.1 | PAS domain-containing protein | - |
| PS047_RS25420 (47202) | 47202..47429 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| PS047_RS25425 (47463) | 47463..47828 | + | 366 | WP_273823912.1 | type IV conjugative transfer system pilin TraA | - |
| PS047_RS25430 (47843) | 47843..48154 | + | 312 | WP_000012118.1 | type IV conjugative transfer system protein TraL | - |
| PS047_RS25435 (48176) | 48176..48742 | + | 567 | WP_273823911.1 | type IV conjugative transfer system protein TraE | - |
| PS047_RS25440 (48729) | 48729..49457 | + | 729 | WP_273823910.1 | type-F conjugative transfer system secretin TraK | - |
| PS047_RS25445 (49457) | 49457..50884 | + | 1428 | WP_273823909.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| PS047_RS25450 (50874) | 50874..51464 | + | 591 | WP_000002784.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| PS047_RS25455 (51451) | 51451..51771 | + | 321 | WP_001057305.1 | conjugal transfer protein TrbD | - |
| PS047_RS25460 (51768) | 51768..52283 | + | 516 | WP_000809874.1 | type IV conjugative transfer system lipoprotein TraV | - |
| PS047_RS25465 (52418) | 52418..52639 | + | 222 | WP_001278978.1 | conjugal transfer protein TraR | - |
| PS047_RS25470 (52632) | 52632..53105 | + | 474 | WP_114011942.1 | hypothetical protein | - |
| PS047_RS25475 (53185) | 53185..53403 | + | 219 | WP_000556751.1 | hypothetical protein | - |
| PS047_RS25480 (53431) | 53431..53793 | + | 363 | WP_029400175.1 | hypothetical protein | - |
| PS047_RS25485 (53919) | 53919..56549 | + | 2631 | WP_106907105.1 | type IV secretion system protein TraC | - |
| PS047_RS25490 (56546) | 56546..56932 | + | 387 | WP_000214098.1 | type-F conjugative transfer system protein TrbI | - |
| PS047_RS25495 (56929) | 56929..57561 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| PS047_RS25500 (57558) | 57558..58550 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| PS047_RS25505 (58559) | 58559..59197 | + | 639 | WP_000777692.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| PS047_RS25510 (59194) | 59194..61002 | + | 1809 | WP_273823908.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| PS047_RS25515 (61029) | 61029..61286 | + | 258 | WP_273823938.1 | conjugal transfer protein TrbE | - |
| PS047_RS25520 (61279) | 61279..62022 | + | 744 | WP_059219324.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| PS047_RS25525 (62038) | 62038..62385 | + | 348 | WP_114011940.1 | conjugal transfer protein TrbA | - |
| PS047_RS25530 (62504) | 62504..62788 | + | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| PS047_RS25535 (62775) | 62775..63320 | + | 546 | Protein_79 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| PS047_RS25540 (63310) | 63310..63590 | + | 281 | Protein_80 | P-type conjugative transfer protein TrbJ | - |
| PS047_RS25545 (63577) | 63577..63969 | + | 393 | WP_040072248.1 | F-type conjugal transfer protein TrbF | - |
| PS047_RS25550 (63956) | 63956..65329 | + | 1374 | WP_273823937.1 | conjugal transfer pilus assembly protein TraH | - |
| PS047_RS25555 (65326) | 65326..68151 | + | 2826 | WP_001007030.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| PS047_RS25560 (68148) | 68148..68657 | + | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| PS047_RS25565 (68671) | 68671..69402 | + | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| PS047_RS25570 (69655) | 69655..71808 | + | 2154 | WP_273823907.1 | type IV conjugative transfer system coupling protein TraD | - |
| PS047_RS25575 (71808) | 71808..77078 | + | 5271 | WP_273823906.1 | Multifunctional conjugation protein TraI | Relaxase |
| PS047_RS25580 (77098) | 77098..77844 | + | 747 | WP_273823905.1 | conjugal transfer pilus acetylase TraX | - |
| PS047_RS25585 (77899) | 77899..78459 | + | 561 | WP_273823904.1 | fertility inhibition protein FinO | - |
| PS047_RS25590 (78595) | 78595..78807 | + | 213 | WP_059278122.1 | hypothetical protein | - |
| PS047_RS25595 (79053) | 79053..79514 | + | 462 | WP_000978818.1 | thermonuclease family protein | - |
| PS047_RS25600 (79560) | 79560..79769 | + | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| PS047_RS25605 (79808) | 79808..80398 | + | 591 | WP_000766816.1 | DUF2726 domain-containing protein | - |
| PS047_RS25610 (80638) | 80638..80898 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|