MGE detailed information
MGE type: Prophage MGE length: 56897 bp
Accession: NZ_CP117600 Location: 1033543..1090439 Organism: Escherichia albertii strain BIA_32 Replicon: chromosome
Accession: NZ_CP117600 Location: 1033543..1090439 Organism: Escherichia albertii strain BIA_32 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS047_RS05260 () | 1028820..1029470 | + | 651 | WP_000235605.1 | metal-binding protein ZinT | - |
| PS047_RS05265 () | 1030602..1031255 | + | 654 | WP_054411339.1 | type III secretion system effector ADP-ribosyltransferase EspJ | - |
| PS047_RS05270 () | 1031580..1032590 | + | 1011 | WP_273823729.1 | EspF repeat-containing protein | - |
| PS047_RS05275 () | 1032937..1033530 | - | 594 | Protein_1042 | type III secretion system effector zinc metalloprotease NleC | - |
| PS047_RS05285 () | 1034786..1035208 | - | 423 | Protein_1044 | M85 family metallopeptidase | - |
| PS047_RS05290 () | 1035435..1037807 | - | 2373 | WP_059222305.1 | type III secretion system effector HECT-type E3 ubiquitin transferase | - |
| PS047_RS05295 () | 1037858..1038448 | - | 591 | WP_001298831.1 | T3SS effector NleG family protein | - |
| PS047_RS05300 () | 1038658..1038927 | - | 270 | WP_001023428.1 | phage tail fiber C-terminal domain-containing protein | - |
| PS047_RS05305 () | 1038929..1039981 | - | 1053 | WP_273823730.1 | prophage tail fiber N-terminal domain-containing protein | - |
| PS047_RS05310 () | 1040042..1043539 | - | 3498 | WP_273823731.1 | host specificity protein J | - |
| PS047_RS05315 () | 1043673..1044194 | + | 522 | WP_025238684.1 | superoxide dismutase family protein | - |
| PS047_RS05320 () | 1044237..1044839 | - | 603 | WP_059274999.1 | tail assembly protein | - |
| PS047_RS05325 () | 1044776..1045513 | - | 738 | WP_149508399.1 | C40 family peptidase | - |
| PS047_RS05330 () | 1045518..1046216 | - | 699 | WP_024241847.1 | phage minor tail protein L | - |
| PS047_RS05335 () | 1046216..1046545 | - | 330 | WP_000847354.1 | phage tail protein | - |
| PS047_RS05340 () | 1046542..1048551 | - | 2010 | Protein_1055 | phage tail tape measure protein | - |
| PS047_RS05345 () | 1048608..1049773 | + | 1166 | WP_149012869.1 | hypothetical protein ; Integrase | Integrase |
| PS047_RS05350 () | 1049789..1050376 | - | 588 | Protein_1057 | phage tail length tape measure family protein | - |
| PS047_RS05355 () | 1050369..1050794 | - | 426 | WP_059222279.1 | phage tail assembly protein T | - |
| PS047_RS05360 () | 1050776..1051198 | - | 423 | WP_273823554.1 | phage minor tail protein G | - |
| PS047_RS05365 () | 1051214..1051954 | - | 741 | WP_273823553.1 | phage tail protein | - |
| PS047_RS05370 () | 1051962..1052357 | - | 396 | WP_000683112.1 | phage minor tail U family protein | - |
| PS047_RS05375 () | 1052354..1052932 | - | 579 | WP_059272229.1 | phage tail protein | - |
| PS047_RS05380 () | 1052944..1053297 | - | 354 | WP_149508068.1 | head-tail joining protein | - |
| PS047_RS05385 () | 1053309..1053695 | - | 387 | WP_124782142.1 | DNA-packaging protein FI | - |
| PS047_RS05390 () | 1053737..1054762 | - | 1026 | WP_000118194.1 | major capsid protein | - |
| PS047_RS05395 () | 1054818..1055150 | - | 333 | WP_059269040.1 | head decoration protein | - |
| PS047_RS05400 () | 1055160..1056491 | - | 1332 | WP_149508067.1 | S49 family peptidase | - |
| PS047_RS05405 () | 1056472..1058073 | - | 1602 | WP_273823732.1 | phage portal protein | - |
| PS047_RS05410 () | 1058070..1058282 | - | 213 | WP_000198151.1 | gpW family head-tail joining protein | - |
| PS047_RS05415 () | 1058279..1060204 | - | 1926 | WP_273823733.1 | phage terminase large subunit family protein | - |
| PS047_RS05420 () | 1060179..1060724 | - | 546 | WP_262937477.1 | terminase small subunit | - |
| PS047_RS05425 () | 1061123..1061260 | + | 138 | WP_059222288.1 | DUF3950 domain-containing protein | - |
| PS047_RS05430 () | 1061429..1061743 | - | 315 | WP_059222289.1 | PerC family transcriptional regulator | - |
| PS047_RS05435 () | 1062271..1062455 | - | 185 | Protein_1074 | Rz1 family lipoprotein | - |
| PS047_RS05440 () | 1062382..1062675 | - | 294 | Protein_1075 | lysis protein | - |
| PS047_RS05445 () | 1062672..1063169 | - | 498 | WP_032274775.1 | lysozyme RrrD | - |
| PS047_RS05450 () | 1063169..1063384 | - | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| PS047_RS05455 () | 1064100..1064663 | + | 564 | WP_024246368.1 | DUF1440 domain-containing protein | - |
| PS047_RS05480 () | 1065401..1066090 | - | 690 | WP_059222310.1 | bacteriophage antitermination protein Q | - |
| PS047_RS05485 () | 1066087..1066452 | - | 366 | WP_054413016.1 | RusA family crossover junction endodeoxyribonuclease | - |
| PS047_RS05490 () | 1066453..1067508 | - | 1056 | WP_059276899.1 | DUF968 domain-containing protein | - |
| PS047_RS05495 () | 1067510..1067788 | - | 279 | WP_072254332.1 | hypothetical protein | - |
| PS047_RS05500 () | 1067956..1068111 | - | 156 | WP_001406737.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - | 1068123..1068181 | + | 59 | - | - | Antitoxin Detail |
| PS047_RS05505 () | 1068662..1068859 | - | 198 | Protein_1084 | DUF551 domain-containing protein | - |
| PS047_RS05510 () | 1068839..1069009 | - | 171 | Protein_1085 | hypothetical protein | - |
| PS047_RS05515 () | 1069006..1069413 | - | 408 | WP_137654438.1 | hypothetical protein | - |
| PS047_RS05520 () | 1069572..1069987 | - | 416 | Protein_1087 | DUF977 family protein | - |
| PS047_RS05525 () | 1069995..1070756 | - | 762 | WP_149508055.1 | DUF1627 domain-containing protein | - |
| PS047_RS05530 () | 1070780..1071526 | - | 747 | WP_059227627.1 | ATP-binding protein | - |
| PS047_RS05535 () | 1071533..1072495 | - | 963 | WP_273823734.1 | helix-turn-helix domain-containing protein | - |
| PS047_RS05540 () | 1072519..1072944 | - | 426 | WP_273819617.1 | toxin YdaT family protein | - |
| PS047_RS05545 () | 1072967..1073263 | - | 297 | WP_059217915.1 | toxin YdaS | - |
| PS047_RS05550 () | 1073387..1073863 | + | 477 | WP_059222065.1 | DNA-binding transcriptional repressor RacR | - |
| PS047_RS05555 () | 1074180..1074332 | + | 153 | WP_000379569.1 | DUF1391 family protein | - |
| PS047_RS05560 () | 1074344..1074982 | + | 639 | WP_059222115.1 | hypothetical protein | - |
| PS047_RS05565 () | 1074983..1075192 | - | 210 | WP_001133037.1 | hypothetical protein | - |
| PS047_RS05570 () | 1075761..1075982 | + | 222 | WP_000560212.1 | cell division protein FtsZ | - |
| PS047_RS05575 () | 1076106..1078577 | + | 2472 | WP_059222068.1 | exonuclease | - |
| PS047_RS05580 () | 1078636..1078839 | + | 204 | WP_000096344.1 | DUF4224 domain-containing protein | - |
| PS047_RS05585 () | 1078839..1079889 | + | 1051 | Protein_1100 | hypothetical protein ; Integrase | Integrase |
| PS047_RS05595 () | 1080100..1080897 | + | 798 | WP_024164886.1 | DgsA anti-repressor MtfA | - |
| PS047_RS05605 () | 1081113..1082063 | - | 951 | WP_059222070.1 | HTH-type transcriptional regulator Cbl | - |
| PS047_RS05610 () | 1082181..1082615 | - | 435 | Protein_1103 | LysR family transcriptional regulator | - |
| PS047_RS05620 () | 1083187..1083357 | + | 171 | Protein_1104 | Arm DNA-binding domain-containing protein | - |
| PS047_RS05625 () | 1083677..1084372 | + | 696 | Protein_1105 | DUF6531 domain-containing protein | - |
| PS047_RS05630 () | 1084780..1086093 | + | 1314 | WP_059222073.1 | shikimate transporter | - |
| PS047_RS05635 () | 1086195..1087649 | + | 1455 | WP_025238820.1 | AMP nucleosidase | - |
| PS047_RS05645 () | 1087954..1089440 | + | 1487 | Protein_1108 | EmmdR/YeeO family multidrug/toxin efflux MATE transporter | - |
| PS047_RS05655 () | 1089771..1090295 | + | 525 | Protein_1109 | hypothetical protein ; Integrase | Integrase |
| PS047_RS05660 () | 1090296..1090749 | - | 454 | Protein_1110 | integrase domain-containing protein | - |
| PS047_RS05665 () | 1091033..1091968 | - | 936 | WP_124866051.1 | L,D-transpeptidase | - |
| PS047_RS05670 () | 1092141..1092884 | - | 744 | WP_000040008.1 | adenosylcobinamide-GDP ribazoletransferase | - |
| PS047_RS05675 () | 1092914..1093259 | - | 346 | Protein_1113 | bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | - |
| PS047_RS05680 () | 1093407..1093841 | - | 435 | WP_059222079.1 | hypothetical protein | - |
| PS047_RS05685 () | 1094318..1095232 | - | 915 | WP_000622051.1 | regulatory protein PocR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|