MGE detailed information
MGE type: Prophage MGE length: 47927 bp
Accession: NZ_CP117586 Location: 2837130..2885056 Organism: Escherichia albertii strain BIA_40 Replicon: chromosome
Accession: NZ_CP117586 Location: 2837130..2885056 Organism: Escherichia albertii strain BIA_40 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS042_RS14090 () | 2832189..2833310 | + | 1122 | WP_010341001.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| PS042_RS14095 () | 2833435..2834664 | - | 1230 | WP_105175555.1 | peptidase T | - |
| PS042_RS14100 () | 2834914..2836050 | + | 1137 | WP_000531605.1 | spermidine/putrescine ABC transporter ATP-binding protein PotA | - |
| PS042_RS14105 () | 2836034..2836897 | + | 864 | WP_044709952.1 | spermidine/putrescine ABC transporter permease PotB | - |
| PS042_RS14110 () | 2837130..2837711 | - | 582 | WP_227918134.1 | tail fiber assembly protein | - |
| PS042_RS14115 () | 2837711..2841124 | - | 3414 | WP_273775707.1 | prophage tail fiber N-terminal domain-containing protein | - |
| PS042_RS14120 () | 2841189..2841788 | - | 600 | WP_001233114.1 | Outer membrane protein X | VF |
| PS042_RS14125 () | 2841856..2845335 | - | 3480 | WP_273775709.1 | host specificity protein J | - |
| PS042_RS14130 () | 2845395..2846042 | - | 648 | WP_032149916.1 | tail assembly protein | - |
| PS042_RS14135 () | 2845940..2846683 | - | 744 | WP_038347027.1 | C40 family peptidase | - |
| PS042_RS14140 () | 2846689..2847387 | - | 699 | WP_038347031.1 | phage minor tail protein L | - |
| PS042_RS14145 () | 2847387..2847743 | - | 357 | WP_001330090.1 | phage tail protein | - |
| PS042_RS14150 () | 2847721..2850948 | - | 3228 | WP_273775720.1 | phage tail tape measure protein | - |
| PS042_RS14155 () | 2850995..2851273 | - | 279 | WP_000978930.1 | DUF4035 domain-containing protein | - |
| PS042_RS14160 () | 2851297..2851668 | - | 372 | WP_000164661.1 | phage tail assembly chaperone | - |
| PS042_RS14165 () | 2851683..2852387 | - | 705 | WP_256904038.1 | immunoglobulin domain-containing protein | - |
| PS042_RS14170 () | 2852448..2852792 | - | 345 | WP_001441849.1 | DUF3168 domain-containing protein | - |
| PS042_RS14175 () | 2852789..2853238 | - | 450 | WP_256904039.1 | HK97 gp10 family phage protein | - |
| PS042_RS14180 () | 2853235..2853573 | - | 339 | WP_001147814.1 | phage head closure protein | - |
| PS042_RS14185 () | 2853582..2853899 | - | 318 | WP_000719066.1 | head-tail connector protein | - |
| PS042_RS14190 () | 2853976..2855193 | - | 1218 | WP_256904040.1 | phage major capsid protein | - |
| PS042_RS14195 () | 2855208..2855807 | - | 600 | WP_000999828.1 | HK97 family phage prohead protease | - |
| PS042_RS14200 () | 2855800..2857026 | - | 1227 | WP_000923129.1 | phage portal protein | - |
| PS042_RS14205 () | 2857016..2857177 | - | 162 | WP_000811487.1 | hypothetical protein | - |
| PS042_RS14210 () | 2857174..2858931 | - | 1758 | WP_001140892.1 | terminase large subunit | - |
| PS042_RS14215 () | 2858931..2859413 | - | 483 | WP_001333563.1 | phage terminase small subunit P27 family | - |
| PS042_RS14220 () | 2859561..2859911 | - | 351 | WP_001111090.1 | HNH endonuclease signature motif containing protein | - |
| PS042_RS14225 () | 2860050..2860589 | + | 540 | WP_000351660.1 | YfbU family protein | - |
| PS042_RS14230 () | 2860595..2860861 | - | 267 | WP_001100260.1 | hypothetical protein | - |
| PS042_RS14235 () | 2861079..2861264 | - | 186 | WP_001228685.1 | Rz1 family lipoprotein | - |
| PS042_RS14240 () | 2861481..2862014 | - | 534 | WP_000992100.1 | lysozyme | - |
| PS042_RS14245 () | 2862078..2862428 | - | 351 | WP_000193280.1 | YdfR family protein | - |
| PS042_RS14250 () | 2862433..2862648 | - | 216 | WP_000839572.1 | class II holin family protein | - |
| PS042_RS14275 () | 2863460..2864149 | - | 690 | WP_001064896.1 | bacteriophage antitermination protein Q | - |
| PS042_RS14280 () | 2864146..2864511 | - | 366 | WP_000139992.1 | RusA family crossover junction endodeoxyribonuclease | - |
| PS042_RS14285 () | 2864512..2865567 | - | 1056 | WP_024188444.1 | DUF968 domain-containing protein | - |
| PS042_RS14290 () | 2865569..2865847 | - | 279 | WP_024175747.1 | hypothetical protein | - |
| PS042_RS14295 () | 2866144..2866536 | - | 393 | WP_000737636.1 | hypothetical protein | - |
| PS042_RS14300 () | 2866680..2866835 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - | 2866847..2866905 | + | 59 | - | - | Antitoxin Detail |
| PS042_RS14305 () | 2867422..2868447 | - | 1026 | WP_029397198.1 | DUF5677 domain-containing protein | - |
| PS042_RS14310 () | 2868675..2869100 | - | 426 | WP_046080786.1 | DUF977 family protein | - |
| PS042_RS14315 () | 2869141..2870211 | - | 1071 | WP_256904042.1 | phage replisome organizer | - |
| PS042_RS14320 () | 2870283..2870708 | - | 426 | WP_000693850.1 | toxin YdaT family protein | - |
| PS042_RS14325 () | 2870705..2870920 | - | 216 | WP_060615121.1 | Cro/CI family transcriptional regulator | - |
| PS042_RS14330 () | 2871012..2871686 | + | 675 | WP_223737828.1 | S24 family peptidase | - |
| PS042_RS14335 () | 2871959..2872114 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| PS042_RS14340 () | 2872116..2872244 | + | 129 | WP_000344928.1 | protein YdfB | - |
| PS042_RS14345 () | 2872274..2872492 | + | 219 | WP_001171946.1 | protein YdfC | - |
| PS042_RS14350 () | 2872515..2872844 | + | 330 | WP_029397859.1 | hypothetical protein | - |
| PS042_RS14355 () | 2872813..2873250 | - | 438 | WP_001317923.1 | hypothetical protein | - |
| PS042_RS14360 () | 2873655..2873876 | + | 222 | WP_000560212.1 | cell division protein FtsZ | - |
| PS042_RS14365 () | 2874000..2876471 | + | 2472 | WP_256904000.1 | exonuclease | - |
| PS042_RS14370 () | 2876533..2876802 | + | 270 | WP_000003742.1 | excisionase | - |
| PS042_RS14375 () | 2876771..2877889 | + | 1119 | WP_000074992.1 | hypothetical protein ; Integrase | Integrase |
| PS042_RS14380 () | 2878056..2878850 | + | 795 | WP_000580318.1 | spermidine/putrescine ABC transporter permease PotC | - |
| PS042_RS14385 () | 2878847..2879893 | + | 1047 | WP_000759312.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| PS042_RS14390 () | 2879951..2880412 | + | 462 | WP_010340997.1 | DUF3592 domain-containing protein | - |
| PS042_RS14395 () | 2880409..2881197 | + | 789 | WP_000720231.1 | TPM domain-containing protein | - |
| PS042_RS14400 () | 2881335..2882156 | - | 822 | WP_000952753.1 | NAD-dependent protein deacylase | - |
| PS042_RS14405 () | 2882172..2883083 | - | 912 | WP_000291317.1 | N-acetylglucosamine kinase | - |
| PS042_RS14410 () | 2883111..2884355 | - | 1245 | WP_001251373.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| PS042_RS14415 () | 2884355..2885056 | - | 702 | WP_001059716.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| PS042_RS14420 () | 2885049..2886248 | - | 1200 | WP_000284708.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| PS042_RS14425 () | 2886571..2890017 | + | 3447 | WP_059235820.1 | transcription-repair coupling factor | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|