MGE detailed information
MGE type: Genomic_island MGE length: 36377 bp
Accession: NZ_CP117568 Location: 1726102..1762478 Organism: Escherichia albertii strain BIA_5-2 Replicon: chromosome
Accession: NZ_CP117568 Location: 1726102..1762478 Organism: Escherichia albertii strain BIA_5-2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS053_RS08350 (1722239) | 1722239..1722583 | + | 345 | WP_025238538.1 | outer membrane protein assembly factor BamE | - |
| PS053_RS08355 (1722629) | 1722629..1722919 | - | 291 | WP_000014564.1 | RnfH family protein | - |
| PS053_RS08360 (1722909) | 1722909..1723346 | - | 438 | WP_024164737.1 | type II toxin-antitoxin system toxin RatA | - |
| PS053_RS08365 (1723517) | 1723517..1723999 | + | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| PS053_RS08375 (1724780) | 1724780..1726021 | + | 1242 | WP_256879410.1 | integrase | - |
| PS053_RS08380 (1726102) | 1726102..1726809 | - | 708 | WP_256879409.1 | RNA ligase family protein | - |
| PS053_RS08385 (1726809) | 1726809..1727348 | - | 540 | WP_256879408.1 | hypothetical protein | - |
| PS053_RS08390 (1727345) | 1727345..1728628 | - | 1284 | WP_256879407.1 | DUF3696 domain-containing protein | - |
| PS053_RS08395 (1728921) | 1728921..1729250 | - | 330 | WP_256879406.1 | hypothetical protein | - |
| PS053_RS08400 (1729377) | 1729377..1732994 | - | 3618 | WP_256879405.1 | hypothetical protein | - |
| PS053_RS08405 (1733355) | 1733355..1734143 | + | 789 | WP_256879404.1 | hypothetical protein | - |
| PS053_RS08410 (1734140) | 1734140..1737010 | + | 2871 | WP_256879403.1 | NERD domain-containing protein | - |
| PS053_RS08415 (1737165) | 1737165..1737455 | + | 291 | WP_256879402.1 | hypothetical protein | - |
| PS053_RS08420 (1737891) | 1737891..1741742 | + | 3852 | WP_256879401.1 | hypothetical protein | - |
| PS053_RS08425 (1741788) | 1741788..1742390 | + | 603 | WP_273774863.1 | hypothetical protein | - |
| PS053_RS08430 (1742417) | 1742417..1744009 | - | 1593 | WP_048237919.1 | IS66 family transposase ISEc23 | Transposase |
| PS053_RS08435 (1744040) | 1744040..1744390 | - | 351 | WP_000624718.1 | IS66 family transposase ISEc47 | Transposase |
| PS053_RS08440 (1744387) | 1744387..1744812 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| PS053_RS08445 (1745039) | 1745039..1745218 | + | 180 | WP_000925811.1 | hypothetical protein | - |
| PS053_RS08450 (1745487) | 1745487..1746368 | - | 882 | WP_256879399.1 | hypothetical protein | - |
| PS053_RS08455 (1746482) | 1746482..1746721 | + | 240 | WP_072011107.1 | AlpA family phage regulatory protein | - |
| PS053_RS08460 (1746815) | 1746815..1747927 | + | 1113 | WP_256879398.1 | IS4 family transposase IS421 | Transposase |
| PS053_RS08465 (1748237) | 1748237..1749121 | + | 885 | WP_256879397.1 | 50S ribosome-binding GTPase | - |
| PS053_RS08470 (1749358) | 1749358..1750074 | + | 717 | WP_256879396.1 | WYL domain-containing protein | - |
| PS053_RS08475 (1750136) | 1750136..1750606 | + | 471 | WP_256879395.1 | hypothetical protein | - |
| PS053_RS08480 (1750683) | 1750683..1751402 | + | 720 | WP_256879394.1 | hypothetical protein | - |
| PS053_RS08485 (1751499) | 1751499..1751777 | - | 279 | WP_256879393.1 | helix-turn-helix transcriptional regulator | - |
| PS053_RS08490 (1752041) | 1752041..1752475 | - | 435 | WP_256921800.1 | DUF3987 domain-containing protein | - |
| PS053_RS08495 (1752469) | 1752469..1753452 | - | 984 | WP_256921792.1 | DUF3987 domain-containing protein | - |
| PS053_RS08500 (1753772) | 1753772..1754443 | - | 672 | WP_256879392.1 | inovirus Gp2 family protein | - |
| PS053_RS08505 (1754841) | 1754841..1755659 | + | 819 | WP_256879391.1 | DUF932 domain-containing protein | - |
| PS053_RS08510 (1755692) | 1755692..1756165 | + | 474 | WP_256879390.1 | DNA repair protein RadC | - |
| PS053_RS08515 (1756173) | 1756173..1756394 | + | 222 | WP_256879389.1 | DUF987 family protein | - |
| PS053_RS08520 (1756412) | 1756412..1756732 | + | 321 | WP_256879388.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| PS053_RS08525 (1756770) | 1756770..1757093 | + | 324 | WP_256879418.1 | TA system toxin CbtA family protein | Toxin Detail |
| PS053_RS08530 (1757410) | 1757410..1757502 | + | 93 | Protein_1674 | integrase | - |
| PS053_RS08535 (1758087) | 1758087..1758188 | + | 102 | WP_256879387.1 | small membrane protein YkgR | - |
| PS053_RS08540 (1758219) | 1758219..1758512 | - | 294 | WP_125282434.1 | hypothetical protein | - |
| PS053_RS08545 (1758650) | 1758650..1758916 | + | 267 | WP_000812362.1 | type B 50S ribosomal protein L31 | - |
| PS053_RS08550 (1758913) | 1758913..1759053 | + | 141 | WP_000866440.1 | type B 50S ribosomal protein L36 | - |
| PS053_RS08560 (1760262) | 1760262..1762478 | + | 2217 | WP_256879386.1 | alpha-amylase family glycosyl hydrolase | - |
| PS053_RS08565 (1762793) | 1762793..1763770 | + | 978 | WP_107192824.1 | glutarate dioxygenase GlaH | - |
| PS053_RS08570 (1763790) | 1763790..1765058 | + | 1269 | WP_256879417.1 | L-2-hydroxyglutarate oxidase | - |
| PS053_RS08575 (1765081) | 1765081..1766529 | + | 1449 | WP_000772851.1 | NADP-dependent succinate-semialdehyde dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|