MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 43357 bp
Accession: NZ_CP117562 Location: 4260381..4303737 Organism: Escherichia albertii strain BIA_7 Replicon: chromosome
Accession: NZ_CP117562 Location: 4260381..4303737 Organism: Escherichia albertii strain BIA_7 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PS049_RS21000 (4255693) | 4255693..4256280 | - | 588 | WP_054410897.1 | hydrogenase 1 maturation protease | - |
| PS049_RS21005 (4256277) | 4256277..4256984 | - | 708 | WP_001156755.1 | Ni/Fe-hydrogenase b-type cytochrome subunit | - |
| PS049_RS21010 (4257003) | 4257003..4258796 | - | 1794 | WP_273782222.1 | Ni/Fe-hydrogenase large subunit | - |
| PS049_RS21015 (4258793) | 4258793..4259911 | - | 1119 | WP_002461900.1 | hydrogenase 1 small subunit | - |
| PS049_RS21025 (4261043) | 4261043..4261774 | + | 732 | Protein_4092 | Secreted effector protein EspF(U) | VF |
| PS049_RS21030 (4261920) | 4261920..4262189 | - | 270 | WP_001101710.1 | phage tail fiber C-terminal domain-containing protein | - |
| PS049_RS21035 (4262191) | 4262191..4263504 | - | 1314 | WP_273819913.1 | ISNCY family transposase KIS | Transposase |
| PS049_RS21040 (4263569) | 4263569..4264168 | - | 600 | WP_085440544.1 | Outer membrane protein X | VF |
| PS049_RS21045 (4264235) | 4264235..4267708 | - | 3474 | WP_273819914.1 | host specificity protein J | - |
| PS049_RS21050 (4267944) | 4267944..4268525 | - | 582 | WP_029397890.1 | tail assembly protein | - |
| PS049_RS21055 (4268522) | 4268522..4269265 | - | 744 | WP_001432971.1 | C40 family peptidase | - |
| PS049_RS21060 (4269276) | 4269276..4269974 | - | 699 | WP_029397891.1 | phage minor tail protein L | - |
| PS049_RS21065 (4269974) | 4269974..4270303 | - | 330 | WP_000847298.1 | phage tail protein | - |
| PS049_RS21070 (4270300) | 4270300..4272945 | - | 2646 | WP_273819915.1 | phage tail tape measure protein | - |
| PS049_RS21075 (4272995) | 4272995..4273297 | - | 303 | Protein_4102 | phage tail assembly protein T | - |
| PS049_RS21080 (4273324) | 4273324..4273746 | - | 423 | WP_089550592.1 | phage minor tail protein G | - |
| PS049_RS21085 (4273760) | 4273760..4274512 | - | 753 | WP_000235090.1 | Ig domain-containing protein | - |
| PS049_RS21090 (4274520) | 4274520..4274918 | - | 399 | WP_000682716.1 | phage tail terminator protein | - |
| PS049_RS21095 (4274931) | 4274931..4275554 | - | 624 | WP_000974958.1 | phage tail protein | - |
| PS049_RS21100 (4275557) | 4275557..4275838 | - | 282 | WP_001281348.1 | DNA breaking-rejoining protein | - |
| PS049_RS21105 (4275831) | 4275831..4276157 | - | 327 | WP_001097065.1 | DUF2190 family protein | - |
| PS049_RS21110 (4276245) | 4276245..4278269 | - | 2025 | WP_001114424.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| PS049_RS21115 (4278214) | 4278214..4279716 | - | 1503 | WP_000974564.1 | phage portal protein | - |
| PS049_RS21120 (4279716) | 4279716..4279928 | - | 213 | WP_000102415.1 | hypothetical protein | - |
| PS049_RS21125 (4279925) | 4279925..4282048 | - | 2124 | WP_001077625.1 | phage terminase large subunit family protein | - |
| PS049_RS21130 (4282045) | 4282045..4282521 | - | 477 | WP_000373410.1 | DUF1441 family protein | - |
| PS049_RS21135 (4282998) | 4282998..4283183 | - | 186 | WP_122986183.1 | Rz1 family lipoprotein | - |
| PS049_RS21140 (4283400) | 4283400..4283933 | - | 534 | WP_075362709.1 | lysozyme | - |
| PS049_RS21145 (4283997) | 4283997..4284348 | - | 352 | Protein_4116 | YdfR family protein | - |
| PS049_RS21150 (4284353) | 4284353..4284568 | - | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| PS049_RS21155 (4284636) | 4284636..4285688 | - | 1053 | WP_089553594.1 | site-specific DNA-methyltransferase | - |
| PS049_RS21160 (4285839) | 4285839..4286036 | - | 198 | WP_000917767.1 | hypothetical protein | - |
| PS049_RS21165 (4286265) | 4286265..4287086 | - | 822 | WP_089521780.1 | antitermination protein | - |
| PS049_RS21170 (4287083) | 4287083..4287463 | - | 381 | WP_089521778.1 | RusA family crossover junction endodeoxyribonuclease | - |
| PS049_RS21175 (4287464) | 4287464..4288522 | - | 1059 | WP_089521776.1 | DUF968 domain-containing protein | - |
| PS049_RS21180 (4288524) | 4288524..4288802 | - | 279 | WP_001341388.1 | hypothetical protein | - |
| PS049_RS21185 (4288970) | 4288970..4289125 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| PS049_RS21190 (4289372) | 4289372..4289476 | - | 105 | WP_001278450.1 | hypothetical protein | - |
| PS049_RS21195 (4289592) | 4289592..4289915 | - | 324 | WP_269537498.1 | DUF551 domain-containing protein | - |
| PS049_RS21200 (4289961) | 4289961..4290422 | - | 462 | Protein_4127 | Eaa protein | - |
| PS049_RS21205 (4290419) | 4290419..4290628 | - | 210 | WP_000951717.1 | hypothetical protein | - |
| PS049_RS21210 (4290630) | 4290630..4291400 | - | 771 | WP_273819922.1 | ead/Ea22-like family protein | - |
| PS049_RS21215 (4291397) | 4291397..4292080 | - | 684 | WP_059239299.1 | hypothetical protein | - |
| PS049_RS21220 (4292077) | 4292077..4292367 | - | 291 | WP_069723346.1 | DUF4752 family protein | - |
| PS049_RS21225 (4292364) | 4292364..4293065 | - | 702 | WP_059239302.1 | ead/Ea22-like family protein | - |
| PS049_RS21230 (4293052) | 4293052..4293804 | - | 753 | WP_089521819.1 | DUF1627 domain-containing protein | - |
| PS049_RS21235 (4293827) | 4293827..4294573 | - | 747 | WP_273819928.1 | ATP-binding protein | - |
| PS049_RS21240 (4294580) | 4294580..4295545 | - | 966 | WP_106121408.1 | hypothetical protein | - |
| PS049_RS21245 (4295526) | 4295526..4296047 | - | 522 | WP_087205716.1 | toxin YdaT family protein | - |
| PS049_RS21250 (4296031) | 4296031..4296309 | - | 279 | WP_089569460.1 | YdaS family helix-turn-helix protein | - |
| PS049_RS21255 (4296426) | 4296426..4296824 | + | 399 | WP_032214971.1 | helix-turn-helix domain-containing protein | - |
| PS049_RS21260 (4296854) | 4296854..4297042 | + | 189 | WP_087205714.1 | stability determinant | Antitoxin Detail |
| PS049_RS21265 (4297046) | 4297046..4297327 | + | 282 | WP_087205712.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PS049_RS21270 (4297607) | 4297607..4297762 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| PS049_RS21275 (4297764) | 4297764..4297892 | + | 129 | WP_000344964.1 | protein YdfB | - |
| PS049_RS21280 (4297922) | 4297922..4298140 | + | 219 | WP_001171946.1 | protein YdfC | - |
| PS049_RS21285 (4298163) | 4298163..4298492 | + | 330 | WP_000394536.1 | hypothetical protein | - |
| PS049_RS21290 (4298461) | 4298461..4298736 | - | 276 | WP_000505224.1 | hypothetical protein | - |
| PS049_RS21295 (4299297) | 4299297..4299485 | + | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| PS049_RS21300 (4299482) | 4299482..4299673 | + | 192 | WP_001090200.1 | DUF1482 family protein | - |
| PS049_RS21305 (4299766) | 4299766..4302225 | + | 2460 | WP_273819934.1 | exonuclease | - |
| PS049_RS21310 (4302292) | 4302292..4302543 | + | 252 | WP_024237931.1 | DUF4224 domain-containing protein | - |
| PS049_RS21315 (4302512) | 4302512..4303531 | + | 1020 | WP_002462357.1 | hypothetical protein ; Integrase | Integrase |
| PS049_RS21320 (4303940) | 4303940..4304599 | + | 660 | WP_000375136.1 | FtsH protease modulator YccA | - |
| PS049_RS21325 (4304691) | 4304691..4305020 | + | 330 | WP_024164819.1 | sulfurtransferase TusE | - |
| PS049_RS21330 (4305017) | 4305017..4305295 | - | 279 | WP_000048219.1 | acylphosphatase | - |
| PS049_RS21335 (4305389) | 4305389..4306579 | + | 1191 | WP_000116313.1 | 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI | - |
| PS049_RS21340 (4306637) | 4306637..4306954 | + | 318 | WP_001295356.1 | heat shock protein HspQ | - |
| PS049_RS21345 (4306999) | 4306999..4307412 | - | 414 | WP_002462360.1 | CoA-binding protein | - |
| PS049_RS21350 (4307585) | 4307585..4308247 | + | 663 | WP_000847777.1 | DUF2057 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|