MGE detailed information
MGE type: IScluster/Tn MGE length: 5908 bp
Accession: NZ_CP117473 Location: 14037..19944 Organism: Sphingobium sp. YC-XJ3 Replicon: plasmid unnamed2
Accession: NZ_CP117473 Location: 14037..19944 Organism: Sphingobium sp. YC-XJ3 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PO876_RS26545 (PO876_26545) | 9440..10348 | + | 909 | WP_011607941.1 | LysR family transcriptional regulator | - |
| PO876_RS26550 (PO876_26550) | 10352..11125 | - | 774 | WP_011607940.1 | IclR family transcriptional regulator C-terminal domain-containing protein | - |
| PO876_RS26555 (PO876_26555) | 11233..11919 | + | 687 | WP_011607939.1 | 3-oxoacid CoA-transferase subunit A | - |
| PO876_RS26560 (PO876_26560) | 11937..12590 | + | 654 | WP_011607938.1 | 3-oxoacid CoA-transferase subunit B | - |
| PO876_RS26565 (PO876_26565) | 12590..13798 | + | 1209 | WP_011607937.1 | 3-oxoadipyl-CoA thiolase | - |
| PO876_RS26570 (PO876_26570) | 14037..14801 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| PO876_RS26575 (PO876_26575) | 14941..16761 | + | 1821 | Protein_16 | Tn3 family transposase TnpA_ISMpo10 | Transposase |
| PO876_RS26580 (PO876_26580) | 16780..17034 | - | 255 | WP_013041563.1 | hypothetical protein | - |
| PO876_RS26585 (PO876_26585) | 17456..17830 | + | 375 | WP_013041565.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PO876_RS26590 (PO876_26590) | 17827..18153 | + | 327 | WP_006964370.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| PO876_RS26595 (PO876_26595) | 18153..18395 | + | 243 | WP_013041566.1 | hypothetical protein | - |
| PO876_RS26600 (PO876_26600) | 18611..19396 | - | 786 | WP_004213209.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| PO876_RS26605 (PO876_26605) | 19393..19944 | - | 552 | WP_004213210.1 | Tn3 family transposase ISPsy42 | Transposase |
| PO876_RS26610 (PO876_26610) | 20084..23041 | + | 2958 | WP_031286087.1 | Tn3 family transposase | - |
| PO876_RS26615 (PO876_26615) | 23135..23290 | + | 156 | WP_231634720.1 | hypothetical protein | - |
| PO876_RS26620 (PO876_26620) | 23311..24423 | - | 1113 | WP_013041568.1 | muramidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|