MGE detailed information
MGE type: IS/Tn MGE length: 459 bp
Accession: NZ_CP117404 Location: 851679..852137 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RM085 Replicon: chromosome
Accession: NZ_CP117404 Location: 851679..852137 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain RM085 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ07_RS04085 (847312) | 847312..847857 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| PQQ07_RS04090 (848122) | 848122..848880 | + | 759 | WP_000244329.1 | amidase activator ActS | - |
| PQQ07_RS04100 (849165) | 849165..849971 | - | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| PQQ07_RS04105 (850246) | 850246..850497 | - | 252 | WP_001540858.1 | hypothetical protein | - |
| PQQ07_RS04110 (850674) | 850674..850901 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| PQQ07_RS04115 (850901) | 850901..851299 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| PQQ07_RS04120 (851679) | 851679..852137 | + | 459 | WP_000502119.1 | IS200-IS605 family transposase IS200F | Transposase |
| PQQ07_RS04125 (852817) | 852817..853353 | + | 537 | WP_001038506.1 | STM3031 family outer membrane protein | - |
| PQQ07_RS04130 (853400) | 853400..854032 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| PQQ07_RS04135 (854751) | 854751..855335 | + | 585 | WP_001244638.1 | fimbrial protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | IS/Tn | TA439 | NC_003197 | 3194324..3194782 | 0 |