MGE detailed information
MGE type: Prophage MGE length: 46831 bp
Accession: NZ_CP117396 Location: 2012023..2058853 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM016 Replicon: chromosome
Accession: NZ_CP117396 Location: 2012023..2058853 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM016 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP86_RS09700 () | 2008124..2009935 | + | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| PQP86_RS09705 () | 2009973..2010614 | + | 642 | WP_000800495.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| PQP86_RS09710 () | 2010714..2011892 | - | 1179 | WP_000173418.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| PQP86_RS09715 () | 2012023..2012313 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| PQP86_RS09720 () | 2012381..2012734 | + | 354 | WP_001042123.1 | protein YebF | - |
| PQP86_RS09725 () | 2012828..2013487 | + | 660 | WP_023243913.1 | tellurite resistance TerB family protein | - |
| PQP86_RS09730 () | 2013700..2015751 | + | 2052 | WP_000936990.1 | oligopeptidase B | - |
| PQP86_RS09735 () | 2015786..2016484 | - | 699 | WP_000944279.1 | exodeoxyribonuclease X | - |
| PQP86_RS09740 () | 2016508..2017164 | - | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| PQP86_RS09745 () | 2017272..2017502 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| PQP86_RS09750 () | 2017640..2018014 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| PQP86_RS09755 () | 2018015..2018890 | + | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| PQP86_RS09760 () | 2018907..2019260 | + | 354 | WP_000722370.1 | YebY family protein | - |
| - | 2019362..2019505 | - | 144 | - | - | Antitoxin Detail |
| - | 2019400..2019503 | + | 104 | - | - | Toxin Detail |
| PQP86_RS09765 () | 2019633..2020474 | - | 842 | Protein_1906 | tyrosine-type recombinase/integrase | - |
| PQP86_RS09770 () | 2020565..2020921 | + | 357 | WP_000003145.1 | hypothetical protein | - |
| PQP86_RS09775 () | 2020875..2021081 | + | 207 | Protein_1908 | phage tail protein | - |
| PQP86_RS09780 () | 2021253..2021408 | + | 156 | Protein_1909 | phage tail protein | - |
| PQP86_RS09785 () | 2021514..2021846 | + | 333 | WP_031609875.1 | DUF1353 domain-containing protein | - |
| PQP86_RS09790 () | 2021895..2022004 | + | 110 | Protein_1911 | tail fiber assembly protein | - |
| PQP86_RS09795 () | 2022095..2022280 | - | 186 | WP_012218702.1 | PagK family vesicle-borne virulence factor | - |
| PQP86_RS09800 () | 2022523..2022720 | - | 198 | Protein_1913 | tail fiber assembly protein | - |
| PQP86_RS09805 () | 2022716..2023486 | - | 771 | WP_001652627.1 | transporter substrate-binding domain-containing protein | - |
| PQP86_RS09810 () | 2023977..2024105 | + | 129 | Protein_1915 | helix-turn-helix domain-containing protein | - |
| PQP86_RS09815 () | 2024134..2024934 | - | 801 | WP_001536069.1 | hypothetical protein | - |
| PQP86_RS09820 () | 2025888..2026967 | - | 1080 | WP_076741596.1 | hypothetical protein ; Integrase | Integrase |
| PQP86_RS09825 () | 2027000..2028151 | - | 1152 | Protein_1918 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| PQP86_RS09830 () | 2028140..2028331 | + | 192 | Protein_1919 | glycoside hydrolase family 19 protein | - |
| PQP86_RS09835 () | 2028385..2028918 | + | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| PQP86_RS09840 () | 2029175..2029342 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| PQP86_RS09845 () | 2029650..2029910 | + | 261 | Protein_1922 | DUF1441 family protein | - |
| PQP86_RS09850 () | 2029912..2030127 | + | 216 | Protein_1923 | shikimate transporter | - |
| PQP86_RS09855 () | 2030125..2030469 | + | 345 | Protein_1924 | macro domain-containing protein | - |
| PQP86_RS09860 () | 2030479..2030949 | + | 471 | Protein_1925 | tail fiber assembly protein | - |
| PQP86_RS09865 () | 2031046..2031246 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| PQP86_RS09870 () | 2031636..2031816 | - | 181 | Protein_1927 | IS3 family transposase | - |
| PQP86_RS09875 () | 2031816..2031941 | + | 126 | WP_001652642.1 | hypothetical protein | - |
| PQP86_RS09880 () | 2032455..2032601 | - | 147 | WP_001520350.1 | hypothetical protein | - |
| PQP86_RS09885 () | 2032595..2032762 | + | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| PQP86_RS09890 () | 2033089..2033703 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| PQP86_RS09895 () | 2033713..2033871 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| PQP86_RS09900 () | 2034004..2034918 | - | 915 | WP_001233454.1 | DMT family transporter | - |
| PQP86_RS24040 () | 2036213..2036329 | - | 117 | WP_231919481.1 | integrase | - |
| PQP86_RS09910 () | 2036705..2037900 | + | 1196 | Protein_1935 | IS256 family transposase | - |
| PQP86_RS09915 () | 2038046..2038186 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| PQP86_RS09920 () | 2038352..2038621 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| PQP86_RS09925 () | 2038991..2039410 | + | 420 | WP_000354407.1 | GNAT family N-acetyltransferase | - |
| PQP86_RS09930 () | 2039783..2040259 | - | 477 | WP_079798327.1 | hypothetical protein | - |
| PQP86_RS09935 () | 2040588..2040983 | - | 396 | WP_000422889.1 | DUF1398 domain-containing protein | - |
| PQP86_RS09940 () | 2041667..2042389 | + | 723 | WP_000182072.1 | hypothetical protein | VF |
| PQP86_RS09945 () | 2042674..2042838 | + | 165 | WP_001134857.1 | hypothetical protein | - |
| PQP86_RS09950 () | 2043062..2043712 | + | 651 | WP_000986174.1 | protein-serine/threonine phosphatase | - |
| PQP86_RS09955 () | 2043731..2043922 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| PQP86_RS09960 () | 2044033..2044269 | - | 237 | WP_024131167.1 | YebV family protein | - |
| PQP86_RS09965 () | 2044387..2045826 | - | 1440 | WP_024152359.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| PQP86_RS09970 () | 2045904..2048537 | - | 2634 | WP_001529852.1 | hypothetical protein | VF |
| PQP86_RS09975 () | 2048506..2049789 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| PQP86_RS09980 () | 2049918..2050415 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| PQP86_RS09985 () | 2050513..2051199 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| PQP86_RS09990 () | 2051219..2053267 | + | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| PQP86_RS09995 () | 2053460..2054341 | + | 882 | WP_000984498.1 | protease HtpX | - |
| PQP86_RS10000 () | 2054389..2055762 | - | 1374 | WP_079798328.1 | MFS transporter | - |
| PQP86_RS10005 () | 2055938..2056729 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| PQP86_RS10010 () | 2056941..2057180 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| PQP86_RS10015 () | 2057338..2057481 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| PQP86_RS10020 () | 2057552..2057839 | + | 288 | WP_001000660.1 | YebO family protein | - |
| PQP86_RS10025 () | 2058488..2058631 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| PQP86_RS10030 () | 2058644..2058853 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| PQP86_RS10035 () | 2059073..2060818 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| PQP86_RS10040 () | 2060884..2061693 | + | 810 | WP_023193489.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| PQP86_RS10045 () | 2061690..2062256 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| PQP86_RS10050 () | 2062666..2063124 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|