MGE detailed information
MGE type: Prophage MGE length: 29205 bp
Accession: NZ_CP117394 Location: 1882063..1911267 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM017 Replicon: chromosome
Accession: NZ_CP117394 Location: 1882063..1911267 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM017 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP77_RS09010 (1878379) | 1878379..1880073 | - | 1695 | WP_010989035.1 | SEL1-like repeat protein | - |
| PQP77_RS09015 (1880757) | 1880757..1881035 | - | 279 | Protein_1762 | transposase | - |
| PQP77_RS09020 (1881121) | 1881121..1881588 | - | 468 | Protein_1763 | phage integrase N-terminal domain-containing protein | - |
| PQP77_RS09025 (1882063) | 1882063..1882536 | - | 474 | WP_001219015.1 | peptidase | - |
| PQP77_RS09035 (1883197) | 1883197..1883502 | - | 306 | Protein_1765 | Arm DNA-binding domain-containing protein | - |
| PQP77_RS09040 (1883918) | 1883918..1884448 | + | 531 | WP_162920401.1 | hypothetical protein | - |
| PQP77_RS09045 (1884588) | 1884588..1885988 | + | 1401 | WP_076741639.1 | hypothetical protein | - |
| PQP77_RS09050 (1885981) | 1885981..1886754 | + | 774 | WP_000137444.1 | chromosome partition protein MukE | - |
| PQP77_RS09055 (1886751) | 1886751..1891334 | + | 4584 | WP_001017147.1 | chromosome partition protein MukB | - |
| PQP77_RS09060 (1891334) | 1891334..1892308 | + | 975 | WP_000548606.1 | DUF2220 family protein | - |
| PQP77_RS09065 (1892421) | 1892421..1893197 | + | 777 | WP_000113631.1 | sigma-70 family RNA polymerase sigma factor | - |
| PQP77_RS09070 (1893194) | 1893194..1893763 | + | 570 | WP_199275335.1 | hypothetical protein | - |
| PQP77_RS09075 (1893756) | 1893756..1897148 | + | 3393 | WP_001000564.1 | UvrD-helicase domain-containing protein | - |
| PQP77_RS09080 (1897236) | 1897236..1897991 | + | 756 | WP_001089670.1 | multiubiquitin domain-containing protein | - |
| PQP77_RS09085 (1897966) | 1897966..1899150 | + | 1185 | WP_076741638.1 | ThiF family adenylyltransferase | - |
| PQP77_RS09090 (1899144) | 1899144..1899608 | + | 465 | WP_001660343.1 | DUF6527 family protein | - |
| PQP77_RS09095 (1899989) | 1899989..1900456 | + | 468 | WP_000201266.1 | hypothetical protein | - |
| PQP77_RS09100 (1900453) | 1900453..1900674 | + | 222 | WP_000813787.1 | helix-turn-helix transcriptional regulator | - |
| PQP77_RS09105 (1901171) | 1901171..1901524 | + | 354 | WP_000269842.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PQP77_RS09110 (1901529) | 1901529..1901831 | + | 303 | WP_000533827.1 | XRE family transcriptional regulator | Antitoxin Detail |
| PQP77_RS09115 (1902337) | 1902337..1903221 | + | 885 | WP_000511750.1 | hypothetical protein ; Integrase | Integrase |
| PQP77_RS09120 (1904090) | 1904090..1905352 | - | 1263 | WP_076741637.1 | Prophage integrase IntA ; Integrase | Integrase |
| PQP77_RS09130 (1905690) | 1905690..1906487 | - | 798 | WP_000598920.1 | DgsA anti-repressor MtfA | - |
| PQP77_RS09140 (1906968) | 1906968..1907129 | + | 162 | WP_001529333.1 | hypothetical protein | - |
| PQP77_RS09145 (1907256) | 1907256..1907675 | + | 420 | WP_000394197.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PQP77_RS09150 (1907678) | 1907678..1908946 | + | 1269 | WP_000457662.1 | Y-family DNA polymerase | - |
| PQP77_RS09155 (1909401) | 1909401..1909613 | + | 213 | WP_000208509.1 | cold-shock protein | - |
| PQP77_RS09160 (1909624) | 1909624..1909812 | + | 189 | WP_024131109.1 | hypothetical protein | - |
| PQP77_RS09165 (1910056) | 1910056..1911267 | - | 1212 | WP_001080675.1 | porin OmpC | - |
| PQP77_RS09170 (1911917) | 1911917..1912216 | + | 300 | WP_000107430.1 | cell division protein DrpB | - |
| PQP77_RS09175 (1912308) | 1912308..1913003 | + | 696 | WP_000377042.1 | phosphohydrolase | - |
| PQP77_RS09180 (1913077) | 1913077..1914507 | + | 1431 | WP_001157294.1 | DNA cytosine methyltransferase | - |
| PQP77_RS09185 (1914488) | 1914488..1914958 | + | 471 | WP_000785978.1 | very short patch repair endonuclease | - |
| PQP77_RS09190 (1914947) | 1914947..1915867 | - | 921 | WP_001212265.1 | drug/metabolite exporter YedA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|