MGE detailed information
MGE type: Genomic_island MGE length: 10163 bp
Accession: NZ_CP117390 Location: 848793..858955 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM008 Replicon: chromosome
Accession: NZ_CP117390 Location: 848793..858955 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM008 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP88_RS04140 (844278) | 844278..845376 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| PQP88_RS04145 (845386) | 845386..846903 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| PQP88_RS04150 (846979) | 846979..847524 | - | 546 | WP_050067887.1 | isopentenyl-diphosphate Delta-isomerase | - |
| PQP88_RS04155 (847789) | 847789..848547 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| PQP88_RS04165 (848793) | 848793..849005 | - | 213 | WP_024152440.1 | hypothetical protein | - |
| PQP88_RS04170 (849182) | 849182..849409 | + | 228 | WP_000557545.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| PQP88_RS04175 (849409) | 849409..849807 | + | 399 | WP_274890525.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| PQP88_RS04180 (850616) | 850616..851152 | + | 537 | WP_001038503.1 | hypothetical protein | VF |
| PQP88_RS04185 (851199) | 851199..851831 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| PQP88_RS04190 (852550) | 852550..853137 | + | 588 | WP_001244643.1 | hypothetical protein | VF |
| PQP88_RS04195 (853257) | 853257..855746 | + | 2490 | WP_000705490.1 | hypothetical protein | VF |
| PQP88_RS04200 (855787) | 855787..856530 | + | 744 | WP_000798502.1 | hypothetical protein | VF |
| PQP88_RS04205 (856527) | 856527..857597 | + | 1071 | WP_000147757.1 | hypothetical protein | - |
| PQP88_RS04210 (857704) | 857704..858210 | + | 507 | WP_000093329.1 | CaiF/GrlA family transcriptional regulator | - |
| PQP88_RS04215 (858197) | 858197..858955 | + | 759 | WP_000134794.1 | transcriptional regulator | - |
| PQP88_RS04220 (859165) | 859165..860007 | - | 843 | WP_000503690.1 | nickel/cobalt efflux protein RcnA | - |
| PQP88_RS04225 (860129) | 860129..860401 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| PQP88_RS04230 (860432) | 860432..861661 | - | 1230 | WP_000036840.1 | amino acid permease | - |
| PQP88_RS04235 (861803) | 861803..862258 | - | 456 | WP_001653678.1 | multidrug/biocide efflux PACE transporter | - |
| PQP88_RS04240 (862362) | 862362..863225 | + | 864 | WP_001270775.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|