MGE detailed information
MGE type: Genomic_island MGE length: 9774 bp
Accession: NZ_CP117388 Location: 849062..858835 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM010 Replicon: chromosome
Accession: NZ_CP117388 Location: 849062..858835 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM010 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ04_RS04140 (844158) | 844158..845256 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| PQQ04_RS04145 (845266) | 845266..846783 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| PQQ04_RS04150 (846859) | 846859..847404 | - | 546 | WP_050067887.1 | isopentenyl-diphosphate Delta-isomerase | - |
| PQQ04_RS04155 (847669) | 847669..848427 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| PQQ04_RS04165 (848673) | 848673..848885 | - | 213 | WP_024152440.1 | hypothetical protein | - |
| PQQ04_RS04170 (849062) | 849062..849289 | + | 228 | WP_000557545.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| PQQ04_RS04175 (849289) | 849289..849687 | + | 399 | WP_000911337.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| PQQ04_RS04180 (850496) | 850496..851032 | + | 537 | WP_001038503.1 | Attachment invasion locus protein | VF |
| PQQ04_RS04185 (851079) | 851079..851711 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| PQQ04_RS04190 (852430) | 852430..853017 | + | 588 | WP_001244643.1 | putative fimbrial-like protein YbgD | VF |
| PQQ04_RS04195 (853137) | 853137..855626 | + | 2490 | WP_000705490.1 | Outer membrane usher protein PapC | VF |
| PQQ04_RS04200 (855667) | 855667..856410 | + | 744 | WP_000798502.1 | Chaperone protein PapD | VF |
| PQQ04_RS04205 (856407) | 856407..857477 | + | 1071 | WP_000147757.1 | hypothetical protein | - |
| PQQ04_RS04210 (857584) | 857584..858090 | + | 507 | WP_000093329.1 | CaiF/GrlA family transcriptional regulator | - |
| PQQ04_RS04215 (858077) | 858077..858835 | + | 759 | WP_000134794.1 | transcriptional regulator | - |
| PQQ04_RS04220 (859045) | 859045..859887 | - | 843 | WP_000503690.1 | nickel/cobalt efflux protein RcnA | - |
| PQQ04_RS04225 (860009) | 860009..860281 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| PQQ04_RS04230 (860312) | 860312..861541 | - | 1230 | WP_000036840.1 | amino acid permease | - |
| PQQ04_RS04235 (861683) | 861683..862138 | - | 456 | WP_001653678.1 | multidrug/biocide efflux PACE transporter | - |
| PQQ04_RS04240 (862242) | 862242..863105 | + | 864 | WP_001270775.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|