MGE detailed information
MGE type: Prophage MGE length: 20744 bp
Accession: NZ_CP117386 Location: 2578608..2599351 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM011 Replicon: chromosome
Accession: NZ_CP117386 Location: 2578608..2599351 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM011 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP90_RS12685 (2574022) | 2574022..2575734 | - | 1713 | WP_001119828.1 | cellulose biosynthesis regulator diguanylate cyclase DgcQ | - |
| PQP90_RS12690 (2575899) | 2575899..2576084 | - | 186 | WP_001521741.1 | YodC family protein | - |
| PQP90_RS12695 (2576161) | 2576161..2577078 | - | 918 | WP_085983315.1 | DUF808 domain-containing protein | - |
| PQP90_RS12700 (2577248) | 2577248..2578168 | + | 921 | WP_274897596.1 | drug/metabolite exporter YedA | - |
| PQP90_RS12705 (2578157) | 2578157..2578627 | - | 471 | WP_000785978.1 | very short patch repair endonuclease | - |
| PQP90_RS12710 (2578608) | 2578608..2580038 | - | 1431 | WP_001157294.1 | DNA cytosine methyltransferase | - |
| PQP90_RS12715 (2580112) | 2580112..2580807 | - | 696 | WP_000377042.1 | phosphohydrolase | - |
| PQP90_RS12720 (2580899) | 2580899..2581198 | - | 300 | WP_000107430.1 | cell division protein DrpB | - |
| PQP90_RS12725 (2581848) | 2581848..2583059 | + | 1212 | WP_001080675.1 | porin OmpC | - |
| PQP90_RS12730 (2583303) | 2583303..2583491 | - | 189 | WP_024131109.1 | hypothetical protein | - |
| PQP90_RS12735 (2583502) | 2583502..2583714 | - | 213 | WP_000208509.1 | cold-shock protein | - |
| PQP90_RS12740 (2584169) | 2584169..2585437 | - | 1269 | WP_000457662.1 | Y-family DNA polymerase | - |
| PQP90_RS12745 (2585440) | 2585440..2585859 | - | 420 | WP_000394197.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PQP90_RS12750 (2585986) | 2585986..2586147 | - | 162 | WP_001529333.1 | hypothetical protein | - |
| PQP90_RS12760 (2586628) | 2586628..2587425 | + | 798 | WP_000598920.1 | DgsA anti-repressor MtfA | - |
| PQP90_RS12770 (2587763) | 2587763..2589025 | + | 1263 | WP_076741637.1 | hypothetical protein ; Integrase | Integrase |
| PQP90_RS12775 (2589894) | 2589894..2590778 | - | 885 | WP_000511750.1 | hypothetical protein ; Integrase | Integrase |
| PQP90_RS12780 (2591284) | 2591284..2591586 | - | 303 | WP_000533827.1 | XRE family transcriptional regulator | Antitoxin Detail |
| PQP90_RS12785 (2591591) | 2591591..2591944 | - | 354 | WP_000269842.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PQP90_RS12790 (2592441) | 2592441..2592662 | - | 222 | WP_000813787.1 | helix-turn-helix transcriptional regulator | - |
| PQP90_RS12795 (2592659) | 2592659..2593126 | - | 468 | WP_000201266.1 | hypothetical protein | - |
| PQP90_RS12800 (2593507) | 2593507..2593971 | - | 465 | WP_001660343.1 | DUF6527 family protein | - |
| PQP90_RS12805 (2593965) | 2593965..2595149 | - | 1185 | WP_076741638.1 | ThiF family adenylyltransferase | - |
| PQP90_RS12810 (2595124) | 2595124..2595879 | - | 756 | WP_001089670.1 | multiubiquitin domain-containing protein | - |
| PQP90_RS12815 (2595967) | 2595967..2596572 | - | 606 | WP_274897597.1 | hypothetical protein | - |
| PQP90_RS12820 (2596646) | 2596646..2599360 | - | 2715 | WP_274897598.1 | UvrD-helicase domain-containing protein | - |
| PQP90_RS12825 (2599353) | 2599353..2599922 | - | 570 | WP_199275335.1 | hypothetical protein | - |
| PQP90_RS12830 (2599919) | 2599919..2600695 | - | 777 | WP_000113631.1 | sigma-70 family RNA polymerase sigma factor | - |
| PQP90_RS12835 (2600808) | 2600808..2601782 | - | 975 | WP_000548606.1 | DUF2220 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|