MGE detailed information
MGE type: Prophage MGE length: 61363 bp
Accession: NZ_CP117386 Location: 2434371..2495733 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM011 Replicon: chromosome
Accession: NZ_CP117386 Location: 2434371..2495733 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM011 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP90_RS11840 () | 2430100..2430558 | + | 459 | WP_000156280.1 | DUF986 family protein | - |
| PQP90_RS11845 () | 2430968..2431534 | + | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| PQP90_RS11850 () | 2431531..2432340 | - | 810 | WP_023193489.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| PQP90_RS11855 () | 2432406..2434151 | - | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| PQP90_RS11860 () | 2434371..2434580 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| PQP90_RS11865 () | 2434593..2434736 | - | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| PQP90_RS11870 () | 2435385..2435672 | - | 288 | WP_001000660.1 | YebO family protein | - |
| PQP90_RS11875 () | 2435743..2435886 | - | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| PQP90_RS11880 () | 2436044..2436283 | + | 240 | WP_001236777.1 | invasion protein YobH | - |
| PQP90_RS11885 () | 2436495..2437286 | - | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| PQP90_RS11890 () | 2437462..2438835 | + | 1374 | WP_079798328.1 | MFS transporter | - |
| PQP90_RS11895 () | 2438883..2439764 | - | 882 | WP_000984498.1 | protease HtpX | - |
| PQP90_RS11900 () | 2439957..2442005 | - | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| PQP90_RS11905 () | 2442025..2442711 | - | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| PQP90_RS11910 () | 2442809..2443306 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| PQP90_RS11915 () | 2443435..2444718 | + | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| PQP90_RS11920 () | 2444687..2447320 | + | 2634 | WP_001529852.1 | hypothetical protein | VF |
| PQP90_RS11925 () | 2447398..2448837 | + | 1440 | WP_024152359.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| PQP90_RS11930 () | 2448955..2449191 | + | 237 | WP_024131167.1 | YebV family protein | - |
| PQP90_RS11935 () | 2449302..2449493 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| PQP90_RS11940 () | 2449512..2450162 | - | 651 | WP_000986174.1 | protein-serine/threonine phosphatase | - |
| PQP90_RS11945 () | 2450386..2450550 | - | 165 | WP_001134857.1 | hypothetical protein | - |
| PQP90_RS11950 () | 2450835..2451557 | - | 723 | WP_000182072.1 | hypothetical protein | VF |
| PQP90_RS11955 () | 2452241..2452636 | + | 396 | WP_000422889.1 | DUF1398 domain-containing protein | - |
| PQP90_RS11960 () | 2452965..2453441 | + | 477 | WP_079798327.1 | hypothetical protein | - |
| PQP90_RS11965 () | 2453814..2454233 | - | 420 | WP_000354407.1 | GNAT family N-acetyltransferase | - |
| PQP90_RS11970 () | 2454603..2454872 | + | 270 | WP_001752421.1 | hypothetical protein | - |
| PQP90_RS11975 () | 2455038..2455178 | + | 141 | WP_001617922.1 | hypothetical protein | - |
| PQP90_RS11980 () | 2455324..2456519 | - | 1196 | Protein_2345 | IS256 family transposase | - |
| PQP90_RS24060 () | 2456895..2457011 | + | 117 | WP_231919481.1 | integrase | - |
| PQP90_RS11990 () | 2458306..2459220 | + | 915 | WP_001233454.1 | DMT family transporter | - |
| PQP90_RS11995 () | 2459353..2459511 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| PQP90_RS12000 () | 2459521..2460135 | + | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| PQP90_RS12005 () | 2460462..2460629 | - | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| PQP90_RS12010 () | 2460623..2460769 | + | 147 | WP_001520350.1 | hypothetical protein | - |
| PQP90_RS12015 () | 2461283..2461408 | - | 126 | WP_001652642.1 | hypothetical protein | - |
| PQP90_RS12020 () | 2461408..2461588 | + | 181 | Protein_2353 | IS3 family transposase | - |
| PQP90_RS12025 () | 2461978..2462178 | + | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| PQP90_RS12030 () | 2462275..2462745 | - | 471 | Protein_2355 | tail fiber assembly protein | - |
| PQP90_RS12035 () | 2462755..2463099 | - | 345 | Protein_2356 | macro domain-containing protein | - |
| PQP90_RS12040 () | 2463314..2463574 | - | 261 | Protein_2357 | DUF1441 family protein | - |
| PQP90_RS12045 () | 2463882..2464049 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| PQP90_RS12050 () | 2464306..2464839 | - | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| PQP90_RS12055 () | 2464893..2465084 | - | 192 | Protein_2360 | glycoside hydrolase family 19 protein | - |
| PQP90_RS12060 () | 2465073..2466224 | + | 1152 | Protein_2361 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| PQP90_RS12065 () | 2466257..2467336 | + | 1080 | WP_076741596.1 | hypothetical protein ; Integrase | Integrase |
| PQP90_RS12070 () | 2468290..2469090 | + | 801 | WP_001536069.1 | hypothetical protein | - |
| PQP90_RS12075 () | 2469108..2469248 | - | 141 | Protein_2364 | helix-turn-helix domain-containing protein | - |
| PQP90_RS12080 () | 2469739..2470509 | + | 771 | WP_001652627.1 | transporter substrate-binding domain-containing protein | - |
| PQP90_RS12085 () | 2470505..2470702 | + | 198 | Protein_2366 | tail fiber assembly protein | - |
| PQP90_RS12090 () | 2470945..2471130 | + | 186 | WP_012218702.1 | PagK family vesicle-borne virulence factor | - |
| PQP90_RS12095 () | 2471221..2471330 | - | 110 | Protein_2368 | tail fiber assembly protein | - |
| PQP90_RS12100 () | 2471379..2471711 | - | 333 | WP_031609875.1 | DUF1353 domain-containing protein | - |
| PQP90_RS12105 () | 2471817..2471972 | - | 156 | Protein_2370 | phage tail protein | - |
| PQP90_RS12110 () | 2472144..2472350 | - | 207 | Protein_2371 | phage tail protein | - |
| PQP90_RS12115 () | 2472304..2472660 | - | 357 | WP_000003145.1 | hypothetical protein | - |
| PQP90_RS12120 () | 2472751..2473592 | + | 842 | Protein_2373 | tyrosine-type recombinase/integrase | - |
| - | 2473720..2473863 | + | 144 | - | - | Antitoxin Detail |
| - | 2473722..2473825 | - | 104 | - | - | Toxin Detail |
| PQP90_RS12125 () | 2473965..2474318 | - | 354 | WP_000722370.1 | YebY family protein | - |
| PQP90_RS12130 () | 2474335..2475210 | - | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| PQP90_RS12135 () | 2475211..2475585 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| PQP90_RS12140 () | 2475723..2475953 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| PQP90_RS12145 () | 2476061..2476717 | + | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| PQP90_RS12150 () | 2476741..2477439 | + | 699 | WP_000944279.1 | exodeoxyribonuclease X | - |
| PQP90_RS12155 () | 2477474..2479525 | - | 2052 | WP_000936990.1 | oligopeptidase B | - |
| PQP90_RS12160 () | 2479738..2480397 | - | 660 | WP_023243913.1 | tellurite resistance TerB family protein | - |
| PQP90_RS12165 () | 2480491..2480844 | - | 354 | WP_001042123.1 | protein YebF | - |
| PQP90_RS12170 () | 2480912..2481202 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| PQP90_RS12175 () | 2481333..2482511 | + | 1179 | WP_000173418.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| PQP90_RS12180 () | 2482611..2483252 | - | 642 | WP_000800495.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| PQP90_RS12185 () | 2483290..2485101 | - | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| PQP90_RS12190 () | 2485336..2486811 | - | 1476 | WP_000301704.1 | glucose-6-phosphate dehydrogenase | - |
| PQP90_RS12195 () | 2487153..2488022 | + | 870 | WP_023194353.1 | MurR/RpiR family transcriptional regulator | - |
| PQP90_RS12200 () | 2488146..2489588 | + | 1443 | Protein_2389 | pyruvate kinase | - |
| PQP90_RS12205 () | 2489661..2490632 | - | 972 | WP_000448401.1 | hypothetical protein | VF |
| PQP90_RS12210 () | 2490749..2492068 | - | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| PQP90_RS12215 () | 2492084..2493028 | - | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| PQP90_RS12220 () | 2493107..2493862 | + | 756 | WP_000203013.1 | hypothetical protein | VF |
| PQP90_RS12225 () | 2493859..2494644 | + | 786 | WP_000571508.1 | hypothetical protein | VF |
| PQP90_RS12230 () | 2494723..2495733 | - | 1011 | WP_274895986.1 | hypothetical protein | VF |
| PQP90_RS12235 () | 2495742..2496353 | - | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| PQP90_RS12240 () | 2496714..2497372 | - | 659 | Protein_2397 | hypothetical protein | - |
| PQP90_RS12245 () | 2497615..2498214 | + | 600 | WP_000716742.1 | YebB family permuted papain-like enzyme | - |
| PQP90_RS12250 () | 2498216..2498737 | - | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| PQP90_RS12255 () | 2498774..2499514 | - | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| PQP90_RS12260 () | 2499544..2499996 | - | 453 | WP_000653694.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|