MGE detailed information
MGE type: Prophage MGE length: 29205 bp
Accession: NZ_CP117384 Location: 1882317..1911521 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM013 Replicon: chromosome
Accession: NZ_CP117384 Location: 1882317..1911521 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM013 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP89_RS09005 (1878633) | 1878633..1880327 | - | 1695 | WP_010989035.1 | SEL1-like repeat protein | - |
| PQP89_RS09010 (1881011) | 1881011..1881289 | - | 279 | Protein_1761 | transposase | - |
| PQP89_RS09015 (1881375) | 1881375..1881842 | - | 468 | Protein_1762 | phage integrase N-terminal domain-containing protein | - |
| PQP89_RS09020 (1882317) | 1882317..1882790 | - | 474 | WP_001219015.1 | peptidase | - |
| PQP89_RS09030 (1883451) | 1883451..1883756 | - | 306 | Protein_1764 | Arm DNA-binding domain-containing protein | - |
| PQP89_RS09035 (1884172) | 1884172..1884702 | + | 531 | WP_162920401.1 | hypothetical protein | - |
| PQP89_RS09040 (1884842) | 1884842..1886242 | + | 1401 | WP_076741639.1 | hypothetical protein | - |
| PQP89_RS09045 (1886235) | 1886235..1887008 | + | 774 | WP_000137444.1 | chromosome partition protein MukE | - |
| PQP89_RS09050 (1887005) | 1887005..1891588 | + | 4584 | WP_001017147.1 | chromosome partition protein MukB | - |
| PQP89_RS09055 (1891588) | 1891588..1892562 | + | 975 | WP_000548606.1 | DUF2220 family protein | - |
| PQP89_RS09060 (1892675) | 1892675..1893451 | + | 777 | WP_000113631.1 | sigma-70 family RNA polymerase sigma factor | - |
| PQP89_RS09065 (1893448) | 1893448..1894017 | + | 570 | WP_199275335.1 | hypothetical protein | - |
| PQP89_RS09070 (1894010) | 1894010..1897402 | + | 3393 | WP_001000564.1 | UvrD-helicase domain-containing protein | - |
| PQP89_RS09075 (1897490) | 1897490..1898245 | + | 756 | WP_001089670.1 | multiubiquitin domain-containing protein | - |
| PQP89_RS09080 (1898220) | 1898220..1899404 | + | 1185 | WP_076741638.1 | ThiF family adenylyltransferase | - |
| PQP89_RS09085 (1899398) | 1899398..1899862 | + | 465 | WP_001660343.1 | DUF6527 family protein | - |
| PQP89_RS09090 (1900243) | 1900243..1900710 | + | 468 | WP_000201266.1 | hypothetical protein | - |
| PQP89_RS09095 (1900707) | 1900707..1900928 | + | 222 | WP_000813787.1 | helix-turn-helix transcriptional regulator | - |
| PQP89_RS09100 (1901425) | 1901425..1901778 | + | 354 | WP_000269842.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PQP89_RS09105 (1901783) | 1901783..1902085 | + | 303 | WP_000533827.1 | XRE family transcriptional regulator | Antitoxin Detail |
| PQP89_RS09110 (1902591) | 1902591..1903475 | + | 885 | WP_000511750.1 | hypothetical protein ; Integrase | Integrase |
| PQP89_RS09115 (1904344) | 1904344..1905606 | - | 1263 | WP_076741637.1 | Prophage integrase IntA ; Integrase | Integrase |
| PQP89_RS09125 (1905944) | 1905944..1906741 | - | 798 | WP_000598920.1 | DgsA anti-repressor MtfA | - |
| PQP89_RS09135 (1907222) | 1907222..1907383 | + | 162 | WP_001529333.1 | hypothetical protein | - |
| PQP89_RS09140 (1907510) | 1907510..1907929 | + | 420 | WP_000394197.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PQP89_RS09145 (1907932) | 1907932..1909200 | + | 1269 | WP_000457662.1 | Y-family DNA polymerase | - |
| PQP89_RS09150 (1909655) | 1909655..1909867 | + | 213 | WP_000208509.1 | cold-shock protein | - |
| PQP89_RS09155 (1909878) | 1909878..1910066 | + | 189 | WP_024131109.1 | hypothetical protein | - |
| PQP89_RS09160 (1910310) | 1910310..1911521 | - | 1212 | WP_001080675.1 | porin OmpC | - |
| PQP89_RS09165 (1912171) | 1912171..1912470 | + | 300 | WP_000107430.1 | cell division protein DrpB | - |
| PQP89_RS09170 (1912562) | 1912562..1913257 | + | 696 | WP_000377042.1 | phosphohydrolase | - |
| PQP89_RS09175 (1913331) | 1913331..1914761 | + | 1431 | WP_001157294.1 | DNA cytosine methyltransferase | - |
| PQP89_RS09180 (1914742) | 1914742..1915212 | + | 471 | WP_000785978.1 | very short patch repair endonuclease | - |
| PQP89_RS09185 (1915201) | 1915201..1916121 | - | 921 | WP_001212265.1 | drug/metabolite exporter YedA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|