MGE detailed information
MGE type: Genomic_island MGE length: 9774 bp
Accession: NZ_CP117382 Location: 848958..858731 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM018 Replicon: chromosome
Accession: NZ_CP117382 Location: 848958..858731 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM018 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP98_RS04135 (844054) | 844054..845152 | + | 1099 | WP_274877756.1 | peptide chain release factor 2 | - |
| PQP98_RS04140 (845162) | 845162..846679 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| PQP98_RS04145 (846755) | 846755..847300 | - | 546 | WP_050067887.1 | isopentenyl-diphosphate Delta-isomerase | - |
| PQP98_RS04150 (847565) | 847565..848323 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| PQP98_RS04160 (848569) | 848569..848781 | - | 213 | WP_024152440.1 | hypothetical protein | - |
| PQP98_RS04165 (848958) | 848958..849185 | + | 228 | WP_000557545.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| PQP98_RS04170 (849185) | 849185..849583 | + | 399 | WP_000911337.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| PQP98_RS04175 (850392) | 850392..850928 | + | 537 | WP_001038503.1 | Attachment invasion locus protein | VF |
| PQP98_RS04180 (850975) | 850975..851607 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| PQP98_RS04185 (852326) | 852326..852913 | + | 588 | WP_001244643.1 | putative fimbrial-like protein YbgD | VF |
| PQP98_RS04190 (853033) | 853033..855522 | + | 2490 | WP_000705490.1 | Outer membrane usher protein PapC | VF |
| PQP98_RS04195 (855563) | 855563..856306 | + | 744 | WP_000798502.1 | Chaperone protein PapD | VF |
| PQP98_RS04200 (856303) | 856303..857373 | + | 1071 | WP_000147757.1 | hypothetical protein | - |
| PQP98_RS04205 (857480) | 857480..857986 | + | 507 | WP_000093329.1 | CaiF/GrlA family transcriptional regulator | - |
| PQP98_RS04210 (857973) | 857973..858731 | + | 759 | WP_000134794.1 | transcriptional regulator | - |
| PQP98_RS04215 (858941) | 858941..859783 | - | 843 | WP_000503690.1 | nickel/cobalt efflux protein RcnA | - |
| PQP98_RS04220 (859905) | 859905..860177 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| PQP98_RS04225 (860208) | 860208..861437 | - | 1230 | WP_000036840.1 | amino acid permease | - |
| PQP98_RS04230 (861579) | 861579..862034 | - | 456 | WP_001653678.1 | multidrug/biocide efflux PACE transporter | - |
| PQP98_RS04235 (862138) | 862138..863001 | + | 864 | WP_001270775.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|