MGE detailed information
MGE type: Prophage MGE length: 36515 bp
Accession: NZ_CP117382 Location: 2011848..2048362 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM018 Replicon: chromosome
Accession: NZ_CP117382 Location: 2011848..2048362 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM018 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP98_RS09690 () | 2007949..2009760 | + | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| PQP98_RS09695 () | 2009798..2010439 | + | 642 | WP_000800495.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| PQP98_RS09700 () | 2010539..2011717 | - | 1179 | WP_000173418.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| PQP98_RS09705 () | 2011848..2012138 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| PQP98_RS09710 () | 2012206..2012559 | + | 354 | WP_001042123.1 | protein YebF | - |
| PQP98_RS09715 () | 2012653..2013312 | + | 660 | WP_023243913.1 | tellurite resistance TerB family protein | - |
| PQP98_RS09720 () | 2013525..2015576 | + | 2052 | WP_000936990.1 | oligopeptidase B | - |
| PQP98_RS09725 () | 2015611..2016309 | - | 699 | WP_000944279.1 | exodeoxyribonuclease X | - |
| PQP98_RS09730 () | 2016333..2016989 | - | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| PQP98_RS09735 () | 2017097..2017327 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| PQP98_RS09740 () | 2017465..2017839 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| PQP98_RS09745 () | 2017840..2018715 | + | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| PQP98_RS09750 () | 2018732..2019085 | + | 354 | WP_000722370.1 | YebY family protein | - |
| - | 2019187..2019330 | - | 144 | - | - | Antitoxin Detail |
| - | 2019225..2019328 | + | 104 | - | - | Toxin Detail |
| PQP98_RS09755 () | 2019458..2020299 | - | 842 | Protein_1904 | tyrosine-type recombinase/integrase | - |
| PQP98_RS09760 () | 2020390..2020746 | + | 357 | WP_000003145.1 | hypothetical protein | - |
| PQP98_RS09765 () | 2020700..2020906 | + | 207 | Protein_1906 | phage tail protein | - |
| PQP98_RS09770 () | 2021078..2021233 | + | 156 | Protein_1907 | phage tail protein | - |
| PQP98_RS09775 () | 2021339..2021671 | + | 333 | WP_031609875.1 | DUF1353 domain-containing protein | - |
| PQP98_RS09780 () | 2021720..2021829 | + | 110 | Protein_1909 | tail fiber assembly protein | - |
| PQP98_RS09785 () | 2021920..2022105 | - | 186 | WP_012218702.1 | PagK family vesicle-borne virulence factor | - |
| PQP98_RS09790 () | 2022348..2022545 | - | 198 | Protein_1911 | tail fiber assembly protein | - |
| PQP98_RS09795 () | 2022541..2023311 | - | 771 | WP_001652627.1 | transporter substrate-binding domain-containing protein | - |
| PQP98_RS09800 () | 2023802..2023930 | + | 129 | Protein_1913 | helix-turn-helix domain-containing protein | - |
| PQP98_RS09805 () | 2023959..2024759 | - | 801 | WP_001536069.1 | hypothetical protein | - |
| PQP98_RS09810 () | 2025713..2026792 | - | 1080 | WP_076741596.1 | hypothetical protein ; Integrase | Integrase |
| PQP98_RS09815 () | 2026825..2027976 | - | 1152 | Protein_1916 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| PQP98_RS09820 () | 2027965..2028156 | + | 192 | Protein_1917 | glycoside hydrolase family 19 protein | - |
| PQP98_RS09825 () | 2028210..2028743 | + | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| PQP98_RS09830 () | 2029000..2029167 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| PQP98_RS09835 () | 2029475..2029735 | + | 261 | Protein_1920 | DUF1441 family protein | - |
| PQP98_RS09840 () | 2029737..2029952 | + | 216 | Protein_1921 | shikimate transporter | - |
| PQP98_RS09845 () | 2029950..2030294 | + | 345 | Protein_1922 | macro domain-containing protein | - |
| PQP98_RS09850 () | 2030304..2030774 | + | 471 | Protein_1923 | tail fiber assembly protein | - |
| PQP98_RS09855 () | 2030871..2031071 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| PQP98_RS09860 () | 2031461..2031641 | - | 181 | Protein_1925 | IS3 family transposase | - |
| PQP98_RS09865 () | 2031641..2031766 | + | 126 | WP_001652642.1 | hypothetical protein | - |
| PQP98_RS09870 () | 2032280..2032426 | - | 147 | WP_001520350.1 | hypothetical protein | - |
| PQP98_RS09875 () | 2032420..2032587 | + | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| PQP98_RS09880 () | 2032914..2033528 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| PQP98_RS09885 () | 2033538..2033696 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| PQP98_RS09890 () | 2033829..2034743 | - | 915 | WP_001233454.1 | DMT family transporter | - |
| PQP98_RS24040 () | 2036038..2036154 | - | 117 | WP_231919481.1 | integrase | - |
| PQP98_RS09900 () | 2036530..2037725 | + | 1196 | Protein_1933 | IS256 family transposase | - |
| PQP98_RS09905 () | 2037871..2038011 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| PQP98_RS09910 () | 2038177..2038446 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| PQP98_RS09915 () | 2038816..2039235 | + | 420 | WP_000354407.1 | GNAT family N-acetyltransferase | - |
| PQP98_RS09920 () | 2039608..2040084 | - | 477 | WP_079798327.1 | hypothetical protein | - |
| PQP98_RS09925 () | 2040413..2040808 | - | 396 | WP_000422889.1 | DUF1398 domain-containing protein | - |
| PQP98_RS09930 () | 2041492..2042214 | + | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| PQP98_RS09935 () | 2042499..2042663 | + | 165 | WP_001134857.1 | hypothetical protein | - |
| PQP98_RS09940 () | 2042887..2043537 | + | 651 | WP_000986174.1 | protein-serine/threonine phosphatase | - |
| PQP98_RS09945 () | 2043556..2043747 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| PQP98_RS09950 () | 2043858..2044094 | - | 237 | WP_024131167.1 | YebV family protein | - |
| PQP98_RS09955 () | 2044212..2045651 | - | 1440 | WP_024152359.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| PQP98_RS09960 () | 2045729..2048362 | - | 2634 | WP_001529852.1 | hypothetical protein | VF |
| PQP98_RS09965 () | 2048331..2049614 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| PQP98_RS09970 () | 2049743..2050240 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| PQP98_RS09975 () | 2050338..2051024 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| PQP98_RS09980 () | 2051044..2053092 | + | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|