MGE detailed information
MGE type: Prophage MGE length: 29205 bp
Accession: NZ_CP117382 Location: 1881999..1911203 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM018 Replicon: chromosome
Accession: NZ_CP117382 Location: 1881999..1911203 Organism: Salmonella enterica subsp. enterica serovar Uganda strain RM018 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP98_RS08995 (1878315) | 1878315..1880009 | - | 1695 | WP_097368408.1 | SEL1-like repeat protein | - |
| PQP98_RS09000 (1880693) | 1880693..1880971 | - | 279 | Protein_1759 | transposase | - |
| PQP98_RS09005 (1881057) | 1881057..1881524 | - | 468 | Protein_1760 | phage integrase N-terminal domain-containing protein | - |
| PQP98_RS09010 (1881999) | 1881999..1882472 | - | 474 | WP_001219015.1 | peptidase | - |
| PQP98_RS09020 (1883133) | 1883133..1883438 | - | 306 | Protein_1762 | Arm DNA-binding domain-containing protein | - |
| PQP98_RS09025 (1883854) | 1883854..1884384 | + | 531 | WP_162920401.1 | hypothetical protein | - |
| PQP98_RS09030 (1884524) | 1884524..1885924 | + | 1401 | WP_076741639.1 | hypothetical protein | - |
| PQP98_RS09035 (1885917) | 1885917..1886690 | + | 774 | WP_000137444.1 | chromosome partition protein MukE | - |
| PQP98_RS09040 (1886687) | 1886687..1891270 | + | 4584 | WP_001017147.1 | chromosome partition protein MukB | - |
| PQP98_RS09045 (1891270) | 1891270..1892244 | + | 975 | WP_000548606.1 | DUF2220 family protein | - |
| PQP98_RS09050 (1892357) | 1892357..1893133 | + | 777 | WP_000113631.1 | sigma-70 family RNA polymerase sigma factor | - |
| PQP98_RS09055 (1893130) | 1893130..1893699 | + | 570 | WP_199275335.1 | hypothetical protein | - |
| PQP98_RS09060 (1893692) | 1893692..1897084 | + | 3393 | WP_001000564.1 | UvrD-helicase domain-containing protein | - |
| PQP98_RS09065 (1897172) | 1897172..1897927 | + | 756 | WP_001089670.1 | multiubiquitin domain-containing protein | - |
| PQP98_RS09070 (1897902) | 1897902..1899086 | + | 1185 | WP_076741638.1 | ThiF family adenylyltransferase | - |
| PQP98_RS09075 (1899080) | 1899080..1899544 | + | 465 | WP_001660343.1 | DUF6527 family protein | - |
| PQP98_RS09080 (1899925) | 1899925..1900392 | + | 468 | WP_000201266.1 | hypothetical protein | - |
| PQP98_RS09085 (1900389) | 1900389..1900610 | + | 222 | WP_000813787.1 | helix-turn-helix transcriptional regulator | - |
| PQP98_RS09090 (1901107) | 1901107..1901460 | + | 354 | WP_000269842.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PQP98_RS09095 (1901465) | 1901465..1901767 | + | 303 | WP_000533827.1 | XRE family transcriptional regulator | Antitoxin Detail |
| PQP98_RS09100 (1902273) | 1902273..1903157 | + | 885 | WP_000511750.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PQP98_RS09105 (1904026) | 1904026..1905288 | - | 1263 | WP_076741637.1 | Prophage integrase IntA ; Integrase | Integrase |
| PQP98_RS09115 (1905626) | 1905626..1906423 | - | 798 | WP_000598920.1 | DgsA anti-repressor MtfA | - |
| PQP98_RS09125 (1906904) | 1906904..1907065 | + | 162 | WP_001529333.1 | hypothetical protein | - |
| PQP98_RS09130 (1907192) | 1907192..1907611 | + | 420 | WP_000394197.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PQP98_RS09135 (1907614) | 1907614..1908882 | + | 1269 | WP_000457662.1 | Y-family DNA polymerase | - |
| PQP98_RS09140 (1909337) | 1909337..1909549 | + | 213 | WP_000208509.1 | cold-shock protein | - |
| PQP98_RS09145 (1909560) | 1909560..1909748 | + | 189 | WP_024131109.1 | hypothetical protein | - |
| PQP98_RS09150 (1909992) | 1909992..1911203 | - | 1212 | WP_001080675.1 | porin OmpC | - |
| PQP98_RS09155 (1911853) | 1911853..1912152 | + | 300 | WP_000107430.1 | cell division protein DrpB | - |
| PQP98_RS09160 (1912244) | 1912244..1912939 | + | 696 | WP_000377042.1 | phosphohydrolase | - |
| PQP98_RS09165 (1913013) | 1913013..1914443 | + | 1431 | WP_001157294.1 | DNA cytosine methyltransferase | - |
| PQP98_RS09170 (1914424) | 1914424..1914894 | + | 471 | WP_000785978.1 | very short patch repair endonuclease | - |
| PQP98_RS09175 (1914883) | 1914883..1915803 | - | 921 | WP_001212265.1 | drug/metabolite exporter YedA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|