MGE detailed information
MGE type: Prophage MGE length: 61772 bp
Accession: NZ_CP117380 Location: 2122509..2184280 Organism: Salmonella enterica subsp. enterica serovar Newport strain RM037 Replicon: chromosome
Accession: NZ_CP117380 Location: 2122509..2184280 Organism: Salmonella enterica subsp. enterica serovar Newport strain RM037 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQP93_RS10610 () | 2118238..2118696 | + | 459 | WP_000156279.1 | DUF986 family protein | - |
| PQP93_RS10615 () | 2119106..2119672 | + | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| PQP93_RS10620 () | 2119669..2120478 | - | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| PQP93_RS10625 () | 2120544..2122289 | - | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| PQP93_RS10630 () | 2122509..2122718 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| PQP93_RS10635 () | 2122731..2122874 | - | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| PQP93_RS10640 () | 2123523..2123810 | - | 288 | WP_001000660.1 | YebO family protein | - |
| PQP93_RS10645 () | 2123881..2124024 | - | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| PQP93_RS10650 () | 2124182..2124421 | + | 240 | WP_001236777.1 | invasion protein YobH | - |
| PQP93_RS10655 () | 2124633..2125424 | - | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| PQP93_RS10660 () | 2125600..2126973 | + | 1374 | WP_000416146.1 | MFS transporter | - |
| PQP93_RS10665 () | 2127021..2127902 | - | 882 | WP_000984498.1 | protease HtpX | - |
| PQP93_RS10670 () | 2128103..2130142 | - | 2040 | Protein_2090 | carboxy terminal-processing peptidase | - |
| PQP93_RS10675 () | 2130162..2130848 | - | 687 | WP_000431405.1 | RNA chaperone ProQ | - |
| PQP93_RS10680 () | 2130946..2131443 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| PQP93_RS10685 () | 2131572..2132855 | + | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| PQP93_RS10690 () | 2132824..2135457 | + | 2634 | WP_001521100.1 | hypothetical protein | VF |
| PQP93_RS10695 () | 2135535..2136974 | + | 1440 | WP_001670762.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| PQP93_RS10700 () | 2137092..2137328 | + | 237 | WP_024131167.1 | YebV family protein | - |
| PQP93_RS10705 () | 2137439..2137630 | + | 192 | WP_000457836.1 | YebW family protein | - |
| PQP93_RS10710 () | 2137649..2138299 | - | 651 | WP_000986175.1 | protein-serine/threonine phosphatase | - |
| PQP93_RS10715 () | 2138523..2138687 | - | 165 | WP_001134856.1 | membrane protein | - |
| PQP93_RS10720 () | 2138972..2139694 | - | 723 | WP_000182072.1 | hypothetical protein | VF |
| PQP93_RS10725 () | 2140378..2140773 | + | 396 | WP_000422887.1 | DUF1398 domain-containing protein | - |
| PQP93_RS10730 () | 2141089..2141565 | + | 477 | WP_000030945.1 | hypothetical protein | - |
| PQP93_RS10735 () | 2141793..2142002 | - | 210 | WP_000974708.1 | CZB domain-containing protein | - |
| PQP93_RS10740 () | 2143201..2143446 | + | 246 | WP_001051755.1 | hypothetical protein | - |
| PQP93_RS10745 () | 2143630..2143833 | + | 204 | WP_000774038.1 | hypothetical protein | VF |
| PQP93_RS10750 () | 2144530..2145543 | + | 1014 | WP_023168584.1 | acyltransferase family protein | - |
| PQP93_RS10755 () | 2145662..2146400 | + | 739 | Protein_2107 | hypothetical protein ; Integrase | Integrase |
| PQP93_RS10760 () | 2147290..2148381 | + | 1092 | Protein_2108 | lipopolysaccharide N-acetylglucosaminyltransferase | - |
| PQP93_RS10765 () | 2148616..2149035 | - | 420 | WP_000354410.1 | GNAT family N-acetyltransferase | - |
| PQP93_RS10770 () | 2149405..2149674 | + | 270 | WP_001752421.1 | hypothetical protein | - |
| PQP93_RS10775 () | 2149839..2149979 | + | 141 | WP_001617922.1 | hypothetical protein | - |
| PQP93_RS10780 () | 2150125..2151319 | - | 1195 | Protein_2112 | IS256 family transposase IS285 | Transposase |
| PQP93_RS10785 () | 2151389..2151811 | + | 423 | Protein_2113 | hypothetical protein ; Integrase | Integrase |
| PQP93_RS10790 () | 2153106..2154020 | + | 915 | WP_001233445.1 | DMT family transporter | - |
| PQP93_RS10795 () | 2154153..2154311 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| PQP93_RS10800 () | 2154321..2154935 | + | 615 | WP_000848072.1 | disulfide bond formation protein B | - |
| PQP93_RS10805 () | 2155262..2155429 | - | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| PQP93_RS10810 () | 2155423..2155569 | + | 147 | WP_000951652.1 | hypothetical protein | - |
| PQP93_RS10815 () | 2156083..2156208 | - | 126 | WP_000457876.1 | hypothetical protein | - |
| PQP93_RS10820 () | 2156208..2156388 | + | 181 | Protein_2120 | IS3 family transposase | - |
| PQP93_RS10825 () | 2156777..2156977 | + | 201 | WP_031604217.1 | PagK family vesicle-borne virulence factor | - |
| PQP93_RS10830 () | 2157074..2157544 | - | 471 | Protein_2122 | tail fiber assembly protein | - |
| PQP93_RS10835 () | 2157554..2157898 | - | 345 | Protein_2123 | macro domain-containing protein | - |
| PQP93_RS10840 () | 2158113..2158373 | - | 261 | Protein_2124 | DUF1441 family protein | - |
| PQP93_RS10845 () | 2158428..2158616 | + | 189 | WP_274890301.1 | hypothetical protein | - |
| PQP93_RS10850 () | 2158681..2158848 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| PQP93_RS10855 () | 2159105..2159639 | - | 535 | Protein_2127 | DUF2514 domain-containing protein | - |
| PQP93_RS10860 () | 2159636..2159884 | - | 249 | Protein_2128 | glycoside hydrolase family 19 protein | - |
| PQP93_RS10865 () | 2160032..2161027 | + | 996 | Protein_2129 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| PQP93_RS10870 () | 2161057..2162136 | + | 1080 | WP_000087646.1 | hypothetical protein ; Integrase | Integrase |
| - | 2162264..2162409 | + | 146 | - | - | Antitoxin Detail |
| - | 2162266..2162369 | - | 104 | - | - | Toxin Detail |
| PQP93_RS10875 () | 2162509..2162862 | - | 354 | WP_000722368.1 | YebY family protein | - |
| PQP93_RS10880 () | 2162879..2163754 | - | 876 | WP_000979684.1 | copper homeostasis membrane protein CopD | - |
| PQP93_RS10885 () | 2163755..2164129 | - | 375 | WP_000168395.1 | CopC domain-containing protein YobA | - |
| PQP93_RS10890 () | 2164267..2164497 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| PQP93_RS10895 () | 2164605..2165261 | + | 657 | WP_000100249.1 | carbon-nitrogen hydrolase family protein | - |
| PQP93_RS10900 () | 2165285..2165983 | + | 699 | WP_000944285.1 | exodeoxyribonuclease X | - |
| PQP93_RS10905 () | 2166020..2168071 | - | 2052 | WP_000936997.1 | oligopeptidase B | - |
| PQP93_RS10910 () | 2168285..2168944 | - | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| PQP93_RS10915 () | 2169038..2169391 | - | 354 | WP_001042123.1 | protein YebF | - |
| PQP93_RS10920 () | 2169459..2169749 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| PQP93_RS10925 () | 2169880..2171058 | + | 1179 | WP_000173429.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| PQP93_RS10930 () | 2171158..2171799 | - | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| PQP93_RS10935 () | 2171837..2173648 | - | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| PQP93_RS10940 () | 2173883..2175358 | - | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| PQP93_RS10945 () | 2175700..2176569 | + | 870 | WP_001056719.1 | MurR/RpiR family transcriptional regulator | - |
| PQP93_RS10950 () | 2176693..2178135 | + | 1443 | WP_000091156.1 | pyruvate kinase | - |
| PQP93_RS10955 () | 2178208..2179179 | - | 972 | WP_000448401.1 | hypothetical protein | VF |
| PQP93_RS10960 () | 2179296..2180615 | - | 1320 | WP_001184031.1 | murein DD-endopeptidase MepM | - |
| PQP93_RS10965 () | 2180631..2181575 | - | 945 | WP_000939594.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| PQP93_RS10970 () | 2181654..2182409 | + | 756 | WP_000203023.1 | hypothetical protein | VF |
| PQP93_RS10975 () | 2182406..2183191 | + | 786 | WP_000571510.1 | hypothetical protein | VF |
| PQP93_RS10980 () | 2183270..2184280 | - | 1011 | WP_000568504.1 | Holliday junction branch migration DNA helicase RuvB | - |
| PQP93_RS10985 () | 2184289..2184900 | - | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| PQP93_RS10990 () | 2185260..2185952 | - | 693 | WP_000227324.1 | hypothetical protein | - |
| PQP93_RS10995 () | 2186161..2186760 | + | 600 | WP_000716750.1 | YebB family permuted papain-like enzyme | - |
| PQP93_RS11000 () | 2186762..2187283 | - | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| PQP93_RS11005 () | 2187320..2188060 | - | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| PQP93_RS11010 () | 2188090..2188542 | - | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|