MGE detailed information
MGE type: IScluster/Tn MGE length: 3104 bp
Accession: NZ_CP117373 Location: 4199758..4202861 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM043 Replicon: chromosome
Accession: NZ_CP117373 Location: 4199758..4202861 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM043 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ08_RS20710 (4195047) | 4195047..4195493 | - | 447 | WP_001077813.1 | SEF18 fimbria major subunit SefD | - |
| PQQ08_RS20715 (4195490) | 4195490..4197934 | - | 2445 | WP_000753927.1 | SEF14/SEF18 fimbria usher protein SefC | - |
| PQQ08_RS20720 (4197951) | 4197951..4198691 | - | 741 | WP_001575372.1 | SEF14/SEF18 fimbria chaperone SefB | - |
| PQQ08_RS20725 (4198813) | 4198813..4199343 | - | 531 | WP_000909460.1 | SEF14 fimbria major subunit SefA | - |
| PQQ08_RS20730 (4199666) | 4199666..4200799 | + | 1134 | Protein_4058 | IS3 family transposase | - |
| PQQ08_RS20735 (4200831) | 4200831..4200971 | - | 141 | Protein_4059 | Arm DNA-binding domain-containing protein | - |
| PQQ08_RS20740 (4201377) | 4201377..4201685 | - | 309 | WP_001199743.1 | CcdB family protein | Toxin Detail |
| PQQ08_RS20745 (4201688) | 4201688..4201927 | - | 240 | WP_001118105.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| PQQ08_RS20750 (4202036) | 4202036..4202284 | - | 249 | WP_000168389.1 | ribbon-helix-helix domain-containing protein | - |
| PQQ08_RS20755 (4202475) | 4202475..4202906 | - | 432 | Protein_4063 | IS630 family transposase ISEc33 | Transposase |
| PQQ08_RS20765 (4203663) | 4203663..4204682 | + | 1020 | WP_274896626.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| PQQ08_RS20770 (4204710) | 4204710..4205240 | - | 531 | WP_000896758.1 | gluconokinase | - |
| PQQ08_RS20775 (4205457) | 4205457..4206488 | + | 1032 | WP_000453348.1 | L-idonate 5-dehydrogenase | - |
| PQQ08_RS20780 (4206513) | 4206513..4207277 | + | 765 | WP_274896627.1 | gluconate 5-dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|