MGE detailed information
MGE type: IScluster/Tn MGE length: 3104 bp
Accession: NZ_CP117367 Location: 4313077..4316180 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM079 Replicon: chromosome
Accession: NZ_CP117367 Location: 4313077..4316180 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM079 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ12_RS21215 (4308366) | 4308366..4308812 | - | 447 | WP_001077813.1 | SEF18 fimbria major subunit SefD | - |
| PQQ12_RS21220 (4308809) | 4308809..4311253 | - | 2445 | WP_000753927.1 | SEF14/SEF18 fimbria usher protein SefC | - |
| PQQ12_RS21225 (4311270) | 4311270..4312010 | - | 741 | WP_001575372.1 | SEF14/SEF18 fimbria chaperone SefB | - |
| PQQ12_RS21230 (4312132) | 4312132..4312629 | - | 498 | WP_001231942.1 | SEF14 fimbria major subunit SefA | - |
| PQQ12_RS21235 (4312985) | 4312985..4314118 | + | 1134 | Protein_4161 | IS3 family transposase | - |
| PQQ12_RS21240 (4314150) | 4314150..4314290 | - | 141 | Protein_4162 | Arm DNA-binding domain-containing protein | - |
| PQQ12_RS21245 (4314696) | 4314696..4315004 | - | 309 | WP_001199743.1 | CcdB family protein | Toxin Detail |
| PQQ12_RS21250 (4315007) | 4315007..4315246 | - | 240 | WP_001118105.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| PQQ12_RS21255 (4315355) | 4315355..4315603 | - | 249 | WP_000168389.1 | ribbon-helix-helix domain-containing protein | - |
| PQQ12_RS21260 (4315794) | 4315794..4316225 | - | 432 | Protein_4166 | IS630 family transposase ISEc33 | Transposase |
| PQQ12_RS21270 (4316982) | 4316982..4318001 | + | 1020 | WP_000152558.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| PQQ12_RS21275 (4318029) | 4318029..4318559 | - | 531 | WP_000896758.1 | gluconokinase | - |
| PQQ12_RS21280 (4318776) | 4318776..4319807 | + | 1032 | WP_000453348.1 | L-idonate 5-dehydrogenase | - |
| PQQ12_RS21285 (4319832) | 4319832..4320596 | + | 765 | WP_001061034.1 | gluconate 5-dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|