MGE detailed information
MGE type: Genomic_island MGE length: 9617 bp
Accession: NZ_CP117367 Location: 2908138..2917754 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM079 Replicon: chromosome
Accession: NZ_CP117367 Location: 2908138..2917754 Organism: Salmonella enterica subsp. enterica serovar Dublin strain RM079 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PQQ12_RS14420 (2905345) | 2905345..2908050 | + | 2706 | WP_000907030.1 | HTH-type transcriptional regulator MalT | - |
| PQQ12_RS14425 (2908138) | 2908138..2908413 | - | 276 | WP_001526148.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| PQQ12_RS14430 (2908416) | 2908416..2908676 | - | 261 | WP_000729713.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| PQQ12_RS14435 (2908785) | 2908785..2909796 | - | 1012 | Protein_2826 | RNA 3'-terminal phosphate cyclase | - |
| PQQ12_RS14440 (2909800) | 2909800..2911014 | - | 1215 | WP_052895987.1 | RNA-splicing ligase RtcB | - |
| PQQ12_RS14445 (2911362) | 2911362..2912915 | - | 1554 | WP_000013013.1 | TROVE domain-containing protein | - |
| PQQ12_RS14450 (2913105) | 2913105..2914687 | + | 1583 | Protein_2829 | Ribosome maturation factor RimM | VF |
| PQQ12_RS14455 (2914684) | 2914684..2915442 | - | 759 | WP_000815085.1 | DeoR/GlpR family transcriptional regulator | - |
| PQQ12_RS14460 (2915649) | 2915649..2916911 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| PQQ12_RS14465 (2917378) | 2917378..2917533 | + | 156 | WP_000546188.1 | hypothetical protein | - |
| PQQ12_RS14470 (2917530) | 2917530..2917754 | + | 225 | WP_000106483.1 | DUF2594 family protein | - |
| PQQ12_RS14475 (2917821) | 2917821..2918543 | - | 723 | WP_001157165.1 | transcriptional regulator SdiA | - |
| PQQ12_RS14480 (2918776) | 2918776..2919528 | - | 753 | WP_001273044.1 | L-cystine ABC transporter ATP-binding protein TcyN | - |
| PQQ12_RS14485 (2919525) | 2919525..2920193 | - | 669 | WP_001158237.1 | cystine ABC transporter permease | - |
| PQQ12_RS14490 (2920214) | 2920214..2921199 | - | 986 | Protein_2837 | D-cysteine desulfhydrase | - |
| PQQ12_RS14495 (2921353) | 2921353..2922153 | - | 801 | WP_000761628.1 | cystine ABC transporter substrate-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|