NZ_CP1173661..146584

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 146584 bp
Accession: NZ_CP117366        Location: 1..146584         Organism: Salmonella enterica subsp. enterica serovar Newport strain RM089       Replicon: plasmid pRM089_1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PQP78_RS23620 (PQP78_23620) 1..1101 + 1101 WP_000350011.1 RepB family plasmid replication initiator protein -
PQP78_RS23625 (PQP78_23625) 2138..2572 - 435 WP_000883925.1 hypothetical protein -
PQP78_RS23630 (PQP78_23630) 2590..3705 - 1116 WP_000946102.1 phosphoadenosine phosphosulfate reductase family protein -
PQP78_RS23635 (PQP78_23635) 3974..4582 + 609 WP_000849071.1 hypothetical protein -
PQP78_RS23640 (PQP78_23640) 4587..5108 + 522 WP_000393785.1 hypothetical protein -
PQP78_RS23645 (PQP78_23645) 5111..5632 + 522 WP_000805800.1 hypothetical protein -
PQP78_RS23650 (PQP78_23650) 5729..6202 + 474 WP_000057877.1 hypothetical protein -
PQP78_RS23655 (PQP78_23655) 6213..6506 + 294 WP_001370730.1 hypothetical protein -
PQP78_RS23660 (PQP78_23660) 6511..7365 + 855 WP_000539392.1 hypothetical protein -
PQP78_RS23665 (PQP78_23665) 7365..8324 + 960 WP_000829616.1 S49 family peptidase -
PQP78_RS23670 (PQP78_23670) 8340..9200 + 861 WP_000139698.1 DsbA family protein -
PQP78_RS23675 (PQP78_23675) 9234..9662 + 429 WP_000591074.1 hypothetical protein -
PQP78_RS23680 (PQP78_23680) 9719..10078 + 360 WP_000422768.1 hypothetical protein -
PQP78_RS23685 (PQP78_23685) 10078..10524 + 447 WP_000919345.1 Fe3+-siderophore ABC transporter permease -
PQP78_RS23690 (PQP78_23690) 10521..11039 + 519 WP_000210756.1 nitrite reductase -
PQP78_RS23695 (PQP78_23695) 11039..11269 + 231 WP_000972663.1 hypothetical protein -
PQP78_RS23700 (PQP78_23700) 11256..12113 + 858 WP_001167032.1 hypothetical protein -
PQP78_RS23705 (PQP78_23705) 12344..12871 + 528 WP_001236377.1 thermonuclease family protein -
PQP78_RS23710 (PQP78_23710) 12929..13201 + 273 WP_001043047.1 HU family DNA-binding protein -
PQP78_RS23715 (PQP78_23715) 13289..13582 + 294 WP_001239997.1 chromosome segregation protein ParM -
PQP78_RS23720 (PQP78_23720) 13609..13911 - 303 WP_000124640.1 XRE family transcriptional regulator Antitoxin Detail
PQP78_RS23725 (PQP78_23725) 13916..14266 - 351 WP_000270043.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
PQP78_RS23730 (PQP78_23730) 14429..14977 + 549 WP_001061574.1 transcriptional regulator -
PQP78_RS23735 (PQP78_23735) 15318..15512 + 195 WP_000343597.1 hypothetical protein -
PQP78_RS23740 (PQP78_23740) 15523..15894 + 372 WP_000516916.1 hypothetical protein -
PQP78_RS23745 (PQP78_23745) 15887..16357 + 471 WP_001281821.1 hypothetical protein -
PQP78_RS23750 (PQP78_23750) 16372..16707 - 336 WP_000683476.1 hypothetical protein -
PQP78_RS23755 (PQP78_23755) 16804..17292 + 489 WP_001273096.1 DUF1643 domain-containing protein -
PQP78_RS23760 (PQP78_23760) 17295..17792 + 498 WP_000062185.1 hypothetical protein -
PQP78_RS23765 (PQP78_23765) 18007..18711 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
PQP78_RS23770 (PQP78_23770) 18776..18955 - 180 Protein_31 helix-turn-helix domain-containing protein -
PQP78_RS23775 (PQP78_23775) 19263..19967 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
PQP78_RS23780 (PQP78_23780) 19973..20113 + 141 WP_001044210.1 hypothetical protein -
PQP78_RS23785 (PQP78_23785) 20599..21336 + 738 WP_001366550.1 Tn3 family transposase TnpR_TnEc1 Transposase
PQP78_RS23790 (PQP78_23790) 21333..21557 + 225 WP_000743213.1 hypothetical protein -
PQP78_RS23795 (PQP78_23795) 21768..23261 + 1494 WP_001120888.1 IS91 family transposase ISVsa3 Transposase
PQP78_RS23800 (PQP78_23800) 23292..24176 + 885 WP_012728215.1 DUF3363 domain-containing protein -
PQP78_RS23805 (PQP78_23805) 24393..25607 + 1215 WP_012728216.1 Bicyclomycin resistance protein ARG
PQP78_RS23810 (PQP78_23810) 25635..25940 + 306 WP_001255015.1 HTH-type transcriptional regulator CynR VF
PQP78_RS23815 (PQP78_23815) 26052..26240 + 189 Protein_40 IS91 family transposase -
PQP78_RS23820 (PQP78_23820) 26207..27406 - 1200 WP_000804063.1 Tetracycline resistance protein, class C ARG
PQP78_RS23825 (PQP78_23825) 27512..28162 + 651 WP_000164043.1 tetracycline resistance transcriptional repressor TetR(A) -
PQP78_RS23830 (PQP78_23830) 28194..28436 - 243 WP_000844627.1 transposase -
PQP78_RS23835 (PQP78_23835) 28742..29578 - 837 WP_000480968.1 hypothetical protein ARG
PQP78_RS23840 (PQP78_23840) 29578..30381 - 804 WP_274892027.1 Aminoglycoside 3'-phosphotransferase ARG
PQP78_RS23845 (PQP78_23845) 30442..31257 - 816 WP_001043260.1 Dihydropteroate synthase ARG
PQP78_RS23850 (PQP78_23850) 31564..31875 + 312 WP_000338945.1 hypothetical protein -
PQP78_RS23855 (PQP78_23855) 32049..32834 + 786 WP_001151304.1 Sporulation initiation inhibitor protein Soj VF
PQP78_RS23860 (PQP78_23860) 32838..34019 + 1182 WP_001207227.1 KorB domain-containing protein -
PQP78_RS23865 (PQP78_23865) 34068..34340 + 273 WP_000703827.1 helix-turn-helix domain-containing protein -
PQP78_RS23870 (PQP78_23870) 34393..35028 - 636 WP_000074431.1 N-6 DNA methylase -
PQP78_RS23875 (PQP78_23875) 35120..35263 - 144 WP_000939033.1 hypothetical protein -
PQP78_RS23880 (PQP78_23880) 35590..35967 + 378 WP_001125904.1 hypothetical protein -
PQP78_RS23885 (PQP78_23885) 35960..36241 + 282 WP_000044823.1 hypothetical protein -
PQP78_RS23890 (PQP78_23890) 36216..36890 + 675 WP_000344149.1 hypothetical protein -
PQP78_RS23895 (PQP78_23895) 36883..37389 + 507 WP_000566443.1 hypothetical protein -
PQP78_RS23900 (PQP78_23900) 37395..37706 + 312 WP_274892028.1 hypothetical protein -
PQP78_RS23905 (PQP78_23905) 37715..38215 + 501 WP_000647188.1 hypothetical protein -
PQP78_RS23910 (PQP78_23910) 38219..39646 + 1428 WP_000936897.1 DNA cytosine methyltransferase -
PQP78_RS23915 (PQP78_23915) 39646..40302 + 657 WP_000268552.1 hypothetical protein -
PQP78_RS23920 (PQP78_23920) 40358..40975 + 618 WP_000464630.1 hypothetical protein -
PQP78_RS23925 (PQP78_23925) 41208..41486 + 279 WP_000746034.1 hypothetical protein -
PQP78_RS23930 (PQP78_23930) 41577..42065 - 489 WP_000467110.1 hypothetical protein -
PQP78_RS23935 (PQP78_23935) 42080..44272 - 2193 WP_000366823.1 DNA topoisomerase 3 -
PQP78_RS23940 (PQP78_23940) 44272..44505 - 234 WP_001191890.1 hypothetical protein -
PQP78_RS23945 (PQP78_23945) 44487..45104 - 618 WP_001249395.1 hypothetical protein -
PQP78_RS23950 (PQP78_23950) 45272..48244 + 2973 WP_001326173.1 hypothetical protein Relaxase
PQP78_RS23955 (PQP78_23955) 48241..50106 + 1866 WP_000178857.1 conjugative transfer system coupling protein TraD -
PQP78_RS23960 (PQP78_23960) 50156..50701 + 546 WP_000228720.1 hypothetical protein -
PQP78_RS23965 (PQP78_23965) 50658..51287 + 630 WP_000743449.1 DUF4400 domain-containing protein -
PQP78_RS23970 (PQP78_23970) 51297..51743 + 447 WP_274892029.1 hypothetical protein -
PQP78_RS23975 (PQP78_23975) 51753..52130 + 378 WP_000869297.1 hypothetical protein -
PQP78_RS23980 (PQP78_23980) 52130..52792 + 663 WP_001231464.1 hypothetical protein -
PQP78_RS23985 (PQP78_23985) 53128..53493 + 366 WP_001052530.1 hypothetical protein -
PQP78_RS23990 (PQP78_23990) 53638..53919 + 282 WP_000805625.1 type IV conjugative transfer system protein TraL -
PQP78_RS23995 (PQP78_23995) 53916..54542 + 627 WP_001049717.1 TraE/TraK family type IV conjugative transfer system protein -
PQP78_RS24000 (PQP78_24000) 54526..55443 + 918 WP_000794249.1 type-F conjugative transfer system secretin TraK -
PQP78_RS24005 (PQP78_24005) 55443..56756 + 1314 WP_024131605.1 TraB/VirB10 family protein -
PQP78_RS24010 (PQP78_24010) 56753..57331 + 579 WP_000793435.1 type IV conjugative transfer system lipoprotein TraV -
PQP78_RS24015 (PQP78_24015) 57335..57727 + 393 WP_000479535.1 TraA family conjugative transfer protein -
PQP78_RS24020 (PQP78_24020) 58012..59274 + 1263 WP_000608644.1 IS1380 family transposase ISEcp1 Transposase
PQP78_RS24025 (PQP78_24025) 59598..60743 + 1146 WP_000976514.1 Beta-lactamase ARG
PQP78_RS24030 (PQP78_24030) 60837..61370 + 534 WP_001221666.1 lipocalin family protein -
PQP78_RS24035 (PQP78_24035) 61367..61684 - 318 WP_000118520.1 quaternary ammonium compound efflux SMR transporter SugE -
PQP78_RS24040 (PQP78_24040) 62412..67898 + 5487 WP_000606835.1 Ig-like domain-containing protein -
PQP78_RS24045 (PQP78_24045) 68047..68754 + 708 WP_001259346.1 DsbC family protein -
PQP78_RS24050 (PQP78_24050) 68751..71198 + 2448 WP_274892030.1 type IV secretion system protein TraC -
PQP78_RS24055 (PQP78_24055) 71213..71530 + 318 WP_000351984.1 hypothetical protein -
PQP78_RS24060 (PQP78_24060) 71527..72057 + 531 WP_001010740.1 S26 family signal peptidase -
PQP78_RS24065 (PQP78_24065) 72020..73285 + 1266 WP_001447719.1 TrbC family F-type conjugative pilus assembly protein -
PQP78_RS24070 (PQP78_24070) 73282..73953 + 672 WP_274892031.1 EAL domain-containing protein -
PQP78_RS24075 (PQP78_24075) 73953..74957 + 1005 WP_005507569.1 TraU family protein -
PQP78_RS24080 (PQP78_24080) 75073..77868 + 2796 WP_001256484.1 conjugal transfer mating pair stabilization protein TraN -
PQP78_RS24085 (PQP78_24085) 77907..78767 - 861 WP_000709517.1 hypothetical protein -
PQP78_RS24090 (PQP78_24090) 78890..79531 - 642 WP_000796664.1 hypothetical protein -
PQP78_RS24095 (PQP78_24095) 79826..80146 + 321 WP_000547566.1 hypothetical protein -
PQP78_RS24100 (PQP78_24100) 80450..80635 + 186 WP_001186917.1 hypothetical protein -
PQP78_RS24105 (PQP78_24105) 80855..81823 + 969 WP_000085160.1 CbbQ/NirQ/NorQ C-terminal domain-containing protein -
PQP78_RS24110 (PQP78_24110) 81834..82742 + 909 WP_000739139.1 hypothetical protein -
PQP78_RS24115 (PQP78_24115) 82803..83333 + 531 WP_000987165.1 single-stranded DNA-binding protein -
PQP78_RS24120 (PQP78_24120) 83428..84417 + 990 WP_001282585.1 phage recombination protein Bet -
PQP78_RS24125 (PQP78_24125) 84480..85490 + 1011 WP_000706865.1 YqaJ viral recombinase family protein -
PQP78_RS24130 (PQP78_24130) 85690..86967 + 1278 WP_000170087.1 DUF3150 domain-containing protein -
PQP78_RS24135 (PQP78_24135) 87052..88848 + 1797 WP_000039319.1 VWA domain-containing protein -
PQP78_RS24140 (PQP78_24140) 88910..89245 + 336 WP_001447572.1 hypothetical protein -
PQP78_RS24145 (PQP78_24145) 89510..90049 + 540 WP_000018872.1 hypothetical protein -
PQP78_RS24150 (PQP78_24150) 90140..90640 + 501 WP_000793769.1 hypothetical protein -
PQP78_RS24155 (PQP78_24155) 90714..91598 + 885 WP_000477209.1 hypothetical protein -
PQP78_RS24160 (PQP78_24160) 91664..91888 + 225 WP_001102700.1 class I ribonucleotide reductase maintenance protein YfaE -
PQP78_RS24165 (PQP78_24165) 91950..92339 + 390 WP_000026577.1 hypothetical protein -
PQP78_RS24170 (PQP78_24170) 92329..92781 + 453 WP_001176699.1 hypothetical protein -
PQP78_RS24175 (PQP78_24175) 93119..93310 + 192 WP_000651508.1 hypothetical protein -
PQP78_RS24180 (PQP78_24180) 93379..93732 + 354 WP_000994741.1 hypothetical protein -
PQP78_RS24185 (PQP78_24185) 93924..94268 + 345 WP_000209093.1 hypothetical protein -
PQP78_RS24190 (PQP78_24190) 94346..94648 + 303 WP_000410925.1 hypothetical protein -
PQP78_RS24195 (PQP78_24195) 94726..96351 + 1626 WP_000201432.1 DNA cytosine methyltransferase -
PQP78_RS24200 (PQP78_24200) 96412..96843 + 432 WP_000687894.1 hypothetical protein -
PQP78_RS24205 (PQP78_24205) 96917..97471 + 555 WP_001093867.1 hypothetical protein -
PQP78_RS24210 (PQP78_24210) 97704..98090 + 387 WP_000042274.1 hypothetical protein -
PQP78_RS24215 (PQP78_24215) 98178..100631 + 2454 WP_001187969.1 phosphoadenosine phosphosulfate reductase -
PQP78_RS24220 (PQP78_24220) 100833..101036 + 204 WP_000050847.1 hypothetical protein -
PQP78_RS24225 (PQP78_24225) 101108..101713 + 606 WP_000071870.1 5'-deoxynucleotidase -
PQP78_RS24230 (PQP78_24230) 101706..101975 + 270 WP_000184110.1 hypothetical protein -
PQP78_RS24235 (PQP78_24235) 101989..102207 + 219 WP_000260293.1 hypothetical protein -
PQP78_RS24240 (PQP78_24240) 102281..102838 + 558 WP_000064432.1 hypothetical protein -
PQP78_RS24245 (PQP78_24245) 102913..103764 + 852 WP_000595210.1 hypothetical protein -
PQP78_RS24250 (PQP78_24250) 104223..104609 + 387 WP_001077336.1 hypothetical protein -
PQP78_RS24255 (PQP78_24255) 104787..106514 + 1728 WP_000122922.1 toprim domain-containing protein -
PQP78_RS24260 (PQP78_24260) 106501..106779 + 279 WP_000268337.1 hypothetical protein -
PQP78_RS24265 (PQP78_24265) 106852..107073 + 222 WP_000714163.1 hypothetical protein -
PQP78_RS24270 (PQP78_24270) 107255..108259 - 1005 WP_000427619.1 IS110 family transposase IS5075 Transposase
PQP78_RS24275 (PQP78_24275) 108338..110242 - 1905 Protein_132 Tn3 family transposase TnpA_TnAs3 Transposase
PQP78_RS24280 (PQP78_24280) 110298..111004 - 707 Protein_133 IS6 family transposase IS15DI Transposase
PQP78_RS24285 (PQP78_24285) 111067..111771 - 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
PQP78_RS24290 (PQP78_24290) 111981..112970 - 990 WP_001276635.1 putative signaling protein VF
PQP78_RS24295 (PQP78_24295) 112967..113203 - 237 WP_001087810.1 broad-spectrum mercury transporter MerE -
PQP78_RS24300 (PQP78_24300) 113200..113565 - 366 WP_000995361.1 mercury resistance co-regulator MerD -
PQP78_RS24305 (PQP78_24305) 113677..114315 - 639 WP_000761850.1 organomercurial lyase MerB -
PQP78_RS24310 (PQP78_24310) 114330..116015 - 1686 WP_000149288.1 mercury(II) reductase -
PQP78_RS24315 (PQP78_24315) 116087..116362 - 276 WP_000732290.1 mercury resistance system periplasmic binding protein MerP -
PQP78_RS24320 (PQP78_24320) 116378..116728 - 351 WP_001294666.1 mercuric transport protein MerT -
PQP78_RS24325 (PQP78_24325) 116800..117234 + 435 WP_000414383.1 IS607 family transposase ISChh1 Transposase
PQP78_RS24330 (PQP78_24330) 117334..118338 + 1005 WP_000427623.1 IS110 family transposase IS4321R Transposase
PQP78_RS24335 (PQP78_24335) 118615..118734 + 120 Protein_144 permease -
PQP78_RS24340 (PQP78_24340) 118744..118860 + 117 WP_000338626.1 hypothetical protein -
PQP78_RS24345 (PQP78_24345) 118981..119355 + 375 WP_000868820.1 hypothetical protein -
PQP78_RS24350 (PQP78_24350) 119469..120194 + 726 WP_000988731.1 hypothetical protein -
PQP78_RS24355 (PQP78_24355) 120435..124580 + 4146 WP_274892026.1 RHS repeat-associated core domain-containing protein -
PQP78_RS24360 (PQP78_24360) 124570..124992 + 423 WP_001165345.1 hypothetical protein -
PQP78_RS24365 (PQP78_24365) 125163..125615 + 453 Protein_150 hypothetical protein -
PQP78_RS24370 (PQP78_24370) 125631..126233 - 603 WP_000278322.1 hypothetical protein -
PQP78_RS24375 (PQP78_24375) 126503..126784 + 282 WP_000575657.1 hypothetical protein -
PQP78_RS24380 (PQP78_24380) 127083..127619 + 537 WP_000949433.1 hypothetical protein -
PQP78_RS24385 (PQP78_24385) 127622..128632 + 1011 WP_000543934.1 IS91 family transposase ISWz1 Transposase
PQP78_RS24390 (PQP78_24390) 128637..129506 + 870 WP_000997323.1 3'-5' exonuclease -
PQP78_RS24395 (PQP78_24395) 129503..129994 + 492 WP_000139717.1 hypothetical protein -
PQP78_RS24400 (PQP78_24400) 130321..131196 + 876 WP_001097010.1 DNA replication terminus site-binding protein -
PQP78_RS24405 (PQP78_24405) 131358..132398 + 1041 WP_000101568.1 DNA-binding protein -
PQP78_RS24410 (PQP78_24410) 132685..134196 + 1512 WP_000811656.1 UvrD-helicase domain-containing protein -
PQP78_RS24415 (PQP78_24415) 134307..135347 + 1041 WP_001326396.1 conjugal transfer protein TraF -
PQP78_RS24420 (PQP78_24420) 135349..136782 + 1434 WP_000256129.1 conjugal transfer protein TraH -
PQP78_RS24425 (PQP78_24425) 136795..140409 + 3615 WP_000534551.1 conjugal transfer protein TraG N-terminal domain-containing protein -
PQP78_RS24430 (PQP78_24430) 140447..140809 - 363 WP_000683483.1 hypothetical protein -
PQP78_RS24435 (PQP78_24435) 141525..141797 + 273 WP_000356489.1 helix-turn-helix domain-containing protein -
PQP78_RS24440 (PQP78_24440) 141797..142330 + 534 WP_000790610.1 transglycosylase SLT domain-containing protein -
PQP78_RS24445 (PQP78_24445) 142341..142949 + 609 WP_000891157.1 hypothetical protein -
PQP78_RS24450 (PQP78_24450) 142946..143496 + 551 Protein_167 FlhC family transcriptional regulator -
PQP78_RS24455 (PQP78_24455) 143556..143975 - 420 WP_000651490.1 H-NS family nucleoid-associated regulatory protein -
PQP78_RS24460 (PQP78_24460) 143977..144270 - 294 WP_000919078.1 hypothetical protein -
PQP78_RS24465 (PQP78_24465) 144287..145270 - 984 WP_000077458.1 ParM/StbA family protein -
PQP78_RS24470 (PQP78_24470) 145769..146308 + 540 WP_001447712.1 conjugative transfer protein MobI(A/C) -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance